RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 SRPXP78539 464 aa8.72□□□□□ -1.01
SNHG4-208ENST00000514110 ZNF79Q15937 498 aa8.72□□□□□ -1.01
SNHG4-208ENST00000514110 C1orf194Q5T5A4 169 aa8.72□□□□□ -1.01
SNHG4-208ENST00000514110 OR4B1Q8NGF8 309 aa8.72□□□□□ -1.01
SNHG4-208ENST00000514110 SLIRPQ9GZT3 109 aaKnown RBP8.72□□□□□ -1.01
SNHG4-208ENST00000514110 SLC35B3Q9H1N7 401 aa8.72□□□□□ -1.01
SNHG4-208ENST00000514110 PLA2G2EQ9NZK7 142 aa8.72□□□□□ -1.01
SNHG4-208ENST00000514110 PKHD1P08F94 4074 aa8.71□□□□□ -1.02
SNHG4-208ENST00000514110 SMIM9A6NGZ8 99 aa8.71□□□□□ -1.02
SNHG4-208ENST00000514110 M0R2N4 97 aa8.71□□□□□ -1.02
SNHG4-208ENST00000514110 SPART-AS1P0CW21 52 aa8.71□□□□□ -1.02
SNHG4-208ENST00000514110 LINC00336Q6ZUF6 198 aa8.71□□□□□ -1.02
SNHG4-208ENST00000514110 TMED4Q7Z7H5 227 aa8.71□□□□□ -1.02
SNHG4-208ENST00000514110 COQ8AQ8NI60 647 aa8.71□□□□□ -1.02
SNHG4-208ENST00000514110 C20orf173Q96LM9 149 aa8.71□□□□□ -1.02
SNHG4-208ENST00000514110 CLUHP3Q96NS8 147 aa8.71□□□□□ -1.02
SNHG4-208ENST00000514110 TRGV9Q99603 122 aa8.71□□□□□ -1.02
SNHG4-208ENST00000514110 BCL7BQ9BQE9 202 aa8.71□□□□□ -1.02
SNHG4-208ENST00000514110 DKK2Q9UBU2 259 aa8.71□□□□□ -1.02
SNHG4-208ENST00000514110 RFNGQ9Y644 331 aa8.71□□□□□ -1.02
SNHG4-208ENST00000514110 DNAH17Q9UFH2 4485 aa8.7□□□□□ -1.02
SNHG4-208ENST00000514110 DUXBA0A1W2PPF3 345 aa8.7□□□□□ -1.02
SNHG4-208ENST00000514110 TMEM189A5PLL7 270 aa8.7□□□□□ -1.02
SNHG4-208ENST00000514110 H3BMQ9 156 aa8.7□□□□□ -1.02
SNHG4-208ENST00000514110 ISLRO14498 428 aa8.7□□□□□ -1.02
SNHG4-208ENST00000514110 RTL8CO15255 209 aa8.7□□□□□ -1.02
SNHG4-208ENST00000514110 FABP1P07148 127 aa8.7□□□□□ -1.02
SNHG4-208ENST00000514110 PAX9P55771 341 aa8.7□□□□□ -1.02
SNHG4-208ENST00000514110 RAB11AP62491 216 aa8.7□□□□□ -1.02
SNHG4-208ENST00000514110 PSG9Q00887 426 aa8.7□□□□□ -1.02
SNHG4-208ENST00000514110 TMEM128Q5BJH2 165 aa8.7□□□□□ -1.02
SNHG4-208ENST00000514110 FAM222AQ5U5X8 452 aa8.7□□□□□ -1.02
SNHG4-208ENST00000514110 FAM78BQ5VT40 261 aa8.7□□□□□ -1.02
SNHG4-208ENST00000514110 OR8I2Q8N0Y5 310 aa8.7□□□□□ -1.02
SNHG4-208ENST00000514110 C1orf158Q8N1D5 194 aa8.7□□□□□ -1.02
SNHG4-208ENST00000514110 THAP8Q8NA92 274 aa8.7□□□□□ -1.02
SNHG4-208ENST00000514110 TRIM63Q969Q1 353 aa8.7□□□□□ -1.02
SNHG4-208ENST00000514110 PPP1R14BQ96C90 147 aa8.7□□□□□ -1.02
SNHG4-208ENST00000514110 C17orf77Q96MU5 243 aa8.7□□□□□ -1.02
SNHG4-208ENST00000514110 PAIP2BQ9ULR5 123 aaKnown RBP8.7□□□□□ -1.02
SNHG4-208ENST00000514110 A0A0J9YX75 114 aa8.69□□□□□ -1.02
SNHG4-208ENST00000514110 PRSS46E5RG02 174 aa8.69□□□□□ -1.02
SNHG4-208ENST00000514110 SPATA31B1PQ5VZV4 182 aa8.69□□□□□ -1.02
SNHG4-208ENST00000514110 EBLN2Q6P2I7 272 aa8.69□□□□□ -1.02
SNHG4-208ENST00000514110 MAGT1Q9H0U3 335 aa8.69□□□□□ -1.02
SNHG4-208ENST00000514110 SLC25A32Q9H2D1 315 aa8.69□□□□□ -1.02
SNHG4-208ENST00000514110 KIAA1109Q2LD37 5005 aa8.69□□□□□ -1.02
SNHG4-208ENST00000514110 PRSS29PA6NIE9 313 aa8.68□□□□□ -1.02
SNHG4-208ENST00000514110 WRBO00258 174 aa8.68□□□□□ -1.02
SNHG4-208ENST00000514110 SLC25A6P12236 298 aa8.68□□□□□ -1.02
SNHG4-208ENST00000514110 GATA2P23769 480 aaPredicted RBP8.68□□□□□ -1.02
SNHG4-208ENST00000514110 FAUP35544 74 aaKnown RBP8.68□□□□□ -1.02
SNHG4-208ENST00000514110 PYDC2Q56P42 97 aa8.68□□□□□ -1.02
SNHG4-208ENST00000514110 TMEM182Q6ZP80 229 aaPredicted RBP8.68□□□□□ -1.02
SNHG4-208ENST00000514110 LRTM2Q8N967 370 aa8.68□□□□□ -1.02
SNHG4-208ENST00000514110 MCFD2Q8NI22 146 aa8.68□□□□□ -1.02
SNHG4-208ENST00000514110 C16orf92Q96LL3 132 aa8.68□□□□□ -1.02
SNHG4-208ENST00000514110 NIPSNAP3BQ9BS92 247 aa8.68□□□□□ -1.02
SNHG4-208ENST00000514110 RSG1Q9BU20 258 aa8.68□□□□□ -1.02
SNHG4-208ENST00000514110 SLC25A22Q9H936 323 aa8.68□□□□□ -1.02
SNHG4-208ENST00000514110 RPRMQ9NS64 109 aa8.68□□□□□ -1.02
SNHG4-208ENST00000514110 GOLT1BQ9Y3E0 138 aa8.68□□□□□ -1.02
SNHG4-208ENST00000514110 PIGBOS1A0A0B4J2F0 54 aa8.67□□□□□ -1.02
SNHG4-208ENST00000514110 TEX48A0A1B0GUV7 120 aa8.67□□□□□ -1.02
SNHG4-208ENST00000514110 LOC102723971A0A1B0GUV8 181 aa8.67□□□□□ -1.02
SNHG4-208ENST00000514110 ZNF98A6NK75 572 aa8.67□□□□□ -1.02
SNHG4-208ENST00000514110 A8MTW9 85 aa8.67□□□□□ -1.02
SNHG4-208ENST00000514110 SYNGR2O43760 224 aa8.67□□□□□ -1.02
SNHG4-208ENST00000514110 MED6O75586 246 aa8.67□□□□□ -1.02
SNHG4-208ENST00000514110 HBE1P02100 147 aa8.67□□□□□ -1.02
SNHG4-208ENST00000514110 HTN3P15516 51 aa8.67□□□□□ -1.02
SNHG4-208ENST00000514110 GALR1P47211 349 aa8.67□□□□□ -1.02
SNHG4-208ENST00000514110 PPP1R1AQ13522 171 aa8.67□□□□□ -1.02
SNHG4-208ENST00000514110 LGALS9BQ3B8N2 356 aa8.67□□□□□ -1.02
SNHG4-208ENST00000514110 GGNBP1Q5YKI7 109 aa8.67□□□□□ -1.02
SNHG4-208ENST00000514110 IGFL4Q6B9Z1 124 aa8.67□□□□□ -1.02
SNHG4-208ENST00000514110 AMTNQ6UX39 209 aa8.67□□□□□ -1.02
SNHG4-208ENST00000514110 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.67□□□□□ -1.02
SNHG4-208ENST00000514110 TOMM5Q8N4H5 51 aa8.67□□□□□ -1.02
SNHG4-208ENST00000514110 C7orf50Q9BRJ6 194 aaKnown RBP8.67□□□□□ -1.02
SNHG4-208ENST00000514110 DOK5Q9P104 306 aa8.67□□□□□ -1.02
SNHG4-208ENST00000514110 TMED3Q9Y3Q3 217 aa8.67□□□□□ -1.02
SNHG4-208ENST00000514110 YTHDF2Q9Y5A9 579 aaKnown RBP8.67□□□□□ -1.02
SNHG4-208ENST00000514110 V9GYH0 126 aa8.67□□□□□ -1.02
SNHG4-208ENST00000514110 PKD1P98161 4303 aa8.67□□□□□ -1.02
SNHG4-208ENST00000514110 IGLV2-18A0A075B6J9 118 aa8.66□□□□□ -1.02
SNHG4-208ENST00000514110 NOL3O60936 208 aaKnown RBP8.66□□□□□ -1.02
SNHG4-208ENST00000514110 SFT2D2O95562 160 aa8.66□□□□□ -1.02
SNHG4-208ENST00000514110 SCGB1D2O95969 90 aa8.66□□□□□ -1.02
SNHG4-208ENST00000514110 CFDP00746 253 aaPredicted RBP8.66□□□□□ -1.02
SNHG4-208ENST00000514110 IFNA21P01568 189 aa8.66□□□□□ -1.02
SNHG4-208ENST00000514110 HOXB5P09067 269 aa8.66□□□□□ -1.02
SNHG4-208ENST00000514110 ORM2P19652 201 aa8.66□□□□□ -1.02
SNHG4-208ENST00000514110 MEOX2P50222 304 aa8.66□□□□□ -1.02
SNHG4-208ENST00000514110 AP3S2P59780 193 aa8.66□□□□□ -1.02
SNHG4-208ENST00000514110 RPP30P78346 268 aaKnown RBP8.66□□□□□ -1.02
SNHG4-208ENST00000514110 OXA1LQ15070 435 aa8.66□□□□□ -1.02
SNHG4-208ENST00000514110 SPANXN5Q5MJ07 72 aa8.66□□□□□ -1.02
SNHG4-208ENST00000514110 SAMD13Q5VXD3 122 aa8.66□□□□□ -1.02
SNHG4-208ENST00000514110 UBE2DNLQ8IWF7 75 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms