RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 NECAP1Q8NC96 275 aa5.49□□□□□ -1.53
USP39-219ENST00000496047 FAM110DQ8TAY7 271 aaPredicted RBP5.49□□□□□ -1.53
USP39-219ENST00000496047 CMTM2Q8TAZ6 248 aa5.49□□□□□ -1.53
USP39-219ENST00000496047 TMEM37Q8WXS4 190 aa5.49□□□□□ -1.53
USP39-219ENST00000496047 SRD5A3Q9H8P0 318 aa5.49□□□□□ -1.53
USP39-219ENST00000496047 C21orf62Q9NYP8 219 aa5.49□□□□□ -1.53
USP39-219ENST00000496047 LRBAP50851 2863 aa5.49□□□□□ -1.53
USP39-219ENST00000496047 IGLV11-55A0A075B6I3 123 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 IGHV3-21A0A0B4J1V1 117 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 IGHV1-69DA0A0B4J2H0 117 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 PSMB11A5LHX3 300 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 VWC2LB2RUY7 222 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 B4DSR2 109 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 PEX7O00628 323 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 IGHV1-69P01742 117 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 IGHV3-48P01763 117 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 MSMBP08118 114 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 MGST1P10620 155 aaKnown RBP5.48□□□□□ -1.53
USP39-219ENST00000496047 PSG1P11464 419 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 CRYBB3P26998 211 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 S100A2P29034 98 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 ERVFC1-1P60608 527 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 CX3CL1P78423 397 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 PAX8Q06710 450 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 CENPWQ5EE01 88 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 LCE1DQ5T752 114 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 ZNF343Q6P1L6 599 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 UNQ5815/PRO19632Q6UWF5 114 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 C5orf17Q8NAS9 161 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 SGMS2Q8NHU3 365 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 VN1R17PQ8TDU5 208 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 EEF1AKMT3Q96AZ1 226 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 RNF125Q96EQ8 232 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 FMC1Q96HJ9 113 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 YPEL4Q96NS1 127 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 KRTAP4-7Q9BYR0 210 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 AAMDCQ9H7C9 122 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 TMEM14CQ9P0S9 112 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 CDC42EP3Q9UKI2 254 aa5.48□□□□□ -1.53
USP39-219ENST00000496047 SPG11Q96JI7 2443 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 CR1P17927 2039 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 F8P00451 2351 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 TRBV9A0A0B4J1U6 114 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 SERTM2A0A1B0GWG4 89 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 H3BRN7 92 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 J3QLI3 93 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 K7EIM0 57 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 BMPR1BO00238 502 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 FCN1O00602 326 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 UBE2CO00762 179 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 GGCTO75223 188 aaKnown RBP5.47□□□□□ -1.53
USP39-219ENST00000496047 IL4P05112 153 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 CXCL1P09341 107 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 NBEAP1P0C6P0 100 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 PYYP10082 97 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 HIST1H1EP10412 219 aaKnown RBP5.47□□□□□ -1.53
USP39-219ENST00000496047 PAX1P15863 534 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 CD24P25063 80 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 FCGR2BP31994 310 aaPredicted RBP5.47□□□□□ -1.53
USP39-219ENST00000496047 MFAP2P55001 183 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 SSBP2P81877 361 aaPredicted RBP5.47□□□□□ -1.53
USP39-219ENST00000496047 FOXL1Q12952 345 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 ECSCRQ19T08 205 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 IBA57Q5T440 356 aaKnown RBP5.47□□□□□ -1.53
USP39-219ENST00000496047 TEX38Q6PEX7 206 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 LYPD1Q8N2G4 141 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 Q8N9W7 124 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 BLNKQ8WV28 456 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 FAM167A-AS1Q96KT0 104 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 ATP6V0BQ99437 205 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 ATG101Q9BSB4 218 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 FAM103A1Q9BTL3 118 aaKnown RBP5.47□□□□□ -1.53
USP39-219ENST00000496047 DERL1Q9BUN8 251 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 SLC25A39Q9BZJ4 359 aaPredicted RBP5.47□□□□□ -1.53
USP39-219ENST00000496047 OTORQ9NRC9 128 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 OSTCQ9NRP0 149 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 IL36BQ9NZH7 164 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 RNF114Q9Y508 228 aa5.47□□□□□ -1.53
USP39-219ENST00000496047 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.47□□□□□ -1.533e-12■■■■■ 29.2
USP39-219ENST00000496047 TRBV7-1A0A0A6YYK4 115 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 IGHV7-81A0A0B4J1V7 117 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 IGHV4-61A0A0C4DH41 118 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 A0A0U1RQK1 487 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 CENPVL3A0A0U1RRI6 287 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 ZNF320A2RRD8 509 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 PGPA6NDG6 321 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 C5orf52A6NGY3 159 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 FBLL1A6NHQ2 334 aaKnown RBP5.46□□□□□ -1.54
USP39-219ENST00000496047 GGTLC3B5MD39 225 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 OR2J3O76001 311 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 MT-ND6P03923 174 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 TYMSP04818 313 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 PFN1P07737 140 aaKnown RBP5.46□□□□□ -1.54
USP39-219ENST00000496047 SMIM6P0DI80 62 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 RPL7P18124 248 aaKnown RBP5.46□□□□□ -1.54
USP39-219ENST00000496047 HNF1AP20823 631 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 NPPCP23582 126 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 CSN1S1P47710 185 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 NDUFA6P56556 154 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 SNRPEP62304 92 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms