RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 SMIM8Q96KF7 97 aa9.12□□□□□ -0.95
HSPG2-212ENST00000493940 CIB3Q96Q77 187 aaPredicted RBP9.12□□□□□ -0.95
HSPG2-212ENST00000493940 C7orf50Q9BRJ6 194 aaKnown RBP9.12□□□□□ -0.95
HSPG2-212ENST00000493940 SEC22CQ9BRL7 303 aa9.12□□□□□ -0.95
HSPG2-212ENST00000493940 RCL1Q9Y2P8 373 aaKnown RBP9.12□□□□□ -0.95
HSPG2-212ENST00000493940 STRAPQ9Y3F4 350 aaKnown RBP9.12□□□□□ -0.95
HSPG2-212ENST00000493940 TRAV6A0A075B6T7 132 aa9.11□□□□□ -0.95
HSPG2-212ENST00000493940 SSSCA1O60232 199 aa9.11□□□□□ -0.95
HSPG2-212ENST00000493940 IGKV3-20P01619 116 aa9.11□□□□□ -0.95
HSPG2-212ENST00000493940 MBPP02686 304 aaPredicted RBP9.11□□□□□ -0.95
HSPG2-212ENST00000493940 METTL15P1P0C7V9 234 aa9.11□□□□□ -0.95
HSPG2-212ENST00000493940 IAH1Q2TAA2 248 aaPredicted RBP9.11□□□□□ -0.95
HSPG2-212ENST00000493940 IGFL4Q6B9Z1 124 aa9.11□□□□□ -0.95
HSPG2-212ENST00000493940 TMEM14EPQ6UXP3 125 aa9.11□□□□□ -0.95
HSPG2-212ENST00000493940 COQ8AQ8NI60 647 aa9.11□□□□□ -0.95
HSPG2-212ENST00000493940 C20orf85Q9H1P6 137 aa9.11□□□□□ -0.95
HSPG2-212ENST00000493940 SLC25A32Q9H2D1 315 aa9.11□□□□□ -0.95
HSPG2-212ENST00000493940 C11orf68Q9H3H3 251 aaKnown RBP9.11□□□□□ -0.95
HSPG2-212ENST00000493940 NDUFA13Q9P0J0 144 aa9.11□□□□□ -0.95
HSPG2-212ENST00000493940 XCL2Q9UBD3 114 aa9.11□□□□□ -0.95
HSPG2-212ENST00000493940 TBC1D24Q9ULP9 559 aa9.11□□□□□ -0.95
HSPG2-212ENST00000493940 PIGBOS1A0A0B4J2F0 54 aa9.1□□□□□ -0.95
HSPG2-212ENST00000493940 ZNF98A6NK75 572 aa9.1□□□□□ -0.95
HSPG2-212ENST00000493940 CENPXA8MT69 81 aa9.1□□□□□ -0.95
HSPG2-212ENST00000493940 PRB4P10163 310 aaPredicted RBP9.1□□□□□ -0.95
HSPG2-212ENST00000493940 SPP1P10451 314 aa9.1□□□□□ -0.95
HSPG2-212ENST00000493940 ORM2P19652 201 aa9.1□□□□□ -0.95
HSPG2-212ENST00000493940 RRAS2P62070 204 aaPredicted RBP9.1□□□□□ -0.95
HSPG2-212ENST00000493940 MORN3Q6PF18 240 aaPredicted RBP9.1□□□□□ -0.95
HSPG2-212ENST00000493940 PATE2Q6UY27 113 aa9.1□□□□□ -0.95
HSPG2-212ENST00000493940 TMEM144Q7Z5S9 345 aa9.1□□□□□ -0.95
HSPG2-212ENST00000493940 C11orf45Q8TAV5 145 aa9.1□□□□□ -0.95
HSPG2-212ENST00000493940 LINC00052Q96N35 136 aa9.1□□□□□ -0.95
HSPG2-212ENST00000493940 C11orf1Q9H5F2 150 aa9.1□□□□□ -0.95
HSPG2-212ENST00000493940 SEPSECSQ9HD40 501 aaKnown RBP9.1□□□□□ -0.95
HSPG2-212ENST00000493940 GSKIPQ9P0R6 139 aa9.1□□□□□ -0.95
HSPG2-212ENST00000493940 DOK5Q9P104 306 aa9.1□□□□□ -0.95
HSPG2-212ENST00000493940 FBXL17Q9UF56 701 aa9.1□□□□□ -0.95
HSPG2-212ENST00000493940 CELA1Q9UNI1 258 aa9.1□□□□□ -0.95
HSPG2-212ENST00000493940 C7orf66A4D0T2 115 aa9.09□□□□□ -0.95
HSPG2-212ENST00000493940 NUPR2A6NF83 97 aa9.09□□□□□ -0.95
HSPG2-212ENST00000493940 A6NHS1 94 aa9.09□□□□□ -0.95
HSPG2-212ENST00000493940 LY6G6CO95867 125 aa9.09□□□□□ -0.95
HSPG2-212ENST00000493940 SCGB1D2O95969 90 aa9.09□□□□□ -0.95
HSPG2-212ENST00000493940 IFNA21P01568 189 aa9.09□□□□□ -0.95
HSPG2-212ENST00000493940 HLA-DRB4P13762 266 aa9.09□□□□□ -0.95
HSPG2-212ENST00000493940 IFITM3Q01628 133 aa9.09□□□□□ -0.95
HSPG2-212ENST00000493940 C1orf194Q5T5A4 169 aa9.09□□□□□ -0.95
HSPG2-212ENST00000493940 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.09□□□□□ -0.95
HSPG2-212ENST00000493940 CYP2G1PQ6ZSU1 146 aa9.09□□□□□ -0.95
HSPG2-212ENST00000493940 OR8I2Q8N0Y5 310 aa9.09□□□□□ -0.95
HSPG2-212ENST00000493940 RSG1Q9BU20 258 aa9.09□□□□□ -0.95
HSPG2-212ENST00000493940 SCRT1Q9BWW7 348 aa9.09□□□□□ -0.95
HSPG2-212ENST00000493940 SAV1Q9H4B6 383 aaPredicted RBP9.09□□□□□ -0.95
HSPG2-212ENST00000493940 SLC25A22Q9H936 323 aa9.09□□□□□ -0.95
HSPG2-212ENST00000493940 HLA-DRB4X5D2U9 266 aa9.09□□□□□ -0.95
HSPG2-212ENST00000493940 TRAV8-2A0A0B4J237 113 aa9.08□□□□□ -0.96
HSPG2-212ENST00000493940 SNRPD3P62318 126 aaKnown RBP9.08□□□□□ -0.96
HSPG2-212ENST00000493940 RPP30P78346 268 aaKnown RBP9.08□□□□□ -0.96
HSPG2-212ENST00000493940 AKR1C1Q04828 323 aa9.08□□□□□ -0.96
HSPG2-212ENST00000493940 CNPY1Q3B7I2 92 aa9.08□□□□□ -0.96
HSPG2-212ENST00000493940 ZNF767PQ75MW2 155 aa9.08□□□□□ -0.96
HSPG2-212ENST00000493940 ZNF709Q8N972 641 aa9.08□□□□□ -0.96
HSPG2-212ENST00000493940 OR1B1Q8NGR6 318 aa9.08□□□□□ -0.96
HSPG2-212ENST00000493940 UHRF2Q96PU4 802 aa9.08□□□□□ -0.96
HSPG2-212ENST00000493940 SLC35B3Q9H1N7 401 aa9.08□□□□□ -0.96
HSPG2-212ENST00000493940 DNAH2Q9P225 4427 aa9.07□□□□□ -0.96
HSPG2-212ENST00000493940 SMCO3A2RU48 225 aa9.07□□□□□ -0.96
HSPG2-212ENST00000493940 H3BRN7 92 aa9.07□□□□□ -0.96
HSPG2-212ENST00000493940 ZNF705DP0CH99 300 aaPredicted RBP9.07□□□□□ -0.96
HSPG2-212ENST00000493940 ZNF705BP0CI00 300 aaPredicted RBP9.07□□□□□ -0.96
HSPG2-212ENST00000493940 HLA-DMBP28068 263 aa9.07□□□□□ -0.96
HSPG2-212ENST00000493940 IL15RAQ13261 267 aa9.07□□□□□ -0.96
HSPG2-212ENST00000493940 RPP25LQ8N5L8 163 aaKnown RBP9.07□□□□□ -0.96
HSPG2-212ENST00000493940 TMEM217Q8N7C4 229 aa9.07□□□□□ -0.96
HSPG2-212ENST00000493940 BPIFCQ8NFQ6 507 aa9.07□□□□□ -0.96
HSPG2-212ENST00000493940 PPP1R14BQ96C90 147 aa9.07□□□□□ -0.96
HSPG2-212ENST00000493940 NUDT15Q9NV35 164 aa9.07□□□□□ -0.96
HSPG2-212ENST00000493940 A0A0J9YX75 114 aa9.06□□□□□ -0.96
HSPG2-212ENST00000493940 K7EPK0 472 aa9.06□□□□□ -0.96
HSPG2-212ENST00000493940 MRPS12O15235 138 aaKnown RBP9.06□□□□□ -0.96
HSPG2-212ENST00000493940 DEDDO75618 318 aa9.06□□□□□ -0.96
HSPG2-212ENST00000493940 PRM2P04554 102 aa9.06□□□□□ -0.96
HSPG2-212ENST00000493940 FABP1P07148 127 aa9.06□□□□□ -0.96
HSPG2-212ENST00000493940 MIFP14174 115 aa9.06□□□□□ -0.96
HSPG2-212ENST00000493940 PSMB3P49720 205 aa9.06□□□□□ -0.96
HSPG2-212ENST00000493940 DLK1P80370 383 aa9.06□□□□□ -0.96
HSPG2-212ENST00000493940 PRR20EP86478 221 aa9.06□□□□□ -0.96
HSPG2-212ENST00000493940 PRR20CP86479 221 aa9.06□□□□□ -0.96
HSPG2-212ENST00000493940 PRR20DP86480 221 aa9.06□□□□□ -0.96
HSPG2-212ENST00000493940 PRR20BP86481 221 aa9.06□□□□□ -0.96
HSPG2-212ENST00000493940 PRR20AP86496 221 aa9.06□□□□□ -0.96
HSPG2-212ENST00000493940 SLC38A11Q08AI6 406 aa9.06□□□□□ -0.96
HSPG2-212ENST00000493940 FAM78BQ5VT40 261 aa9.06□□□□□ -0.96
HSPG2-212ENST00000493940 MORN5Q5VZ52 161 aa9.06□□□□□ -0.96
HSPG2-212ENST00000493940 AMTNQ6UX39 209 aa9.06□□□□□ -0.96
HSPG2-212ENST00000493940 Q6ZTC4 211 aa9.06□□□□□ -0.96
HSPG2-212ENST00000493940 C1orf158Q8N1D5 194 aa9.06□□□□□ -0.96
HSPG2-212ENST00000493940 RNF182Q8N6D2 247 aa9.06□□□□□ -0.96
HSPG2-212ENST00000493940 ZNF431Q8TF32 576 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms