RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 ADGRL3Q9HAR2 1447 aa0.51□□□□□ -2.33
SMC4-223ENST00000493695 MUC5BQ9HC84 5762 aaPredicted RBP0.5□□□□□ -2.33
SMC4-223ENST00000493695 TRGV10A0A0A0MS01 117 aa0.5□□□□□ -2.33
SMC4-223ENST00000493695 TCRBV4S1A1TA0A5B7 111 aa0.5□□□□□ -2.33
SMC4-223ENST00000493695 A8MWV9 139 aa0.5□□□□□ -2.33
SMC4-223ENST00000493695 NUPR1O60356 82 aa0.5□□□□□ -2.33
SMC4-223ENST00000493695 TIMM17BO60830 172 aa0.5□□□□□ -2.33
SMC4-223ENST00000493695 S100A6P06703 90 aa0.5□□□□□ -2.33
SMC4-223ENST00000493695 SERPINB9P50453 376 aa0.5□□□□□ -2.33
SMC4-223ENST00000493695 PSG9Q00887 426 aa0.5□□□□□ -2.33
SMC4-223ENST00000493695 KRR1Q13601 381 aaKnown RBP0.5□□□□□ -2.33
SMC4-223ENST00000493695 GRINAQ7Z429 371 aa0.5□□□□□ -2.33
SMC4-223ENST00000493695 SBSPONQ8IVN8 264 aa0.5□□□□□ -2.33
SMC4-223ENST00000493695 BORCS5Q969J3 196 aa0.5□□□□□ -2.33
SMC4-223ENST00000493695 YPEL2Q96QA6 119 aa0.5□□□□□ -2.33
SMC4-223ENST00000493695 GPER1Q99527 375 aa0.5□□□□□ -2.33
SMC4-223ENST00000493695 IMUPQ9GZP8 106 aa0.5□□□□□ -2.33
SMC4-223ENST00000493695 ARHGEF11O15085 1522 aa0.49□□□□□ -2.33
SMC4-223ENST00000493695 KDM6AO15550 1401 aaPredicted RBP0.49□□□□□ -2.33
SMC4-223ENST00000493695 M0R378 163 aa0.49□□□□□ -2.33
SMC4-223ENST00000493695 IFNA6P05013 189 aa0.49□□□□□ -2.33
SMC4-223ENST00000493695 EFNA4P52798 201 aa0.49□□□□□ -2.33
SMC4-223ENST00000493695 LINC00322Q6ZN03 302 aaPredicted RBP0.49□□□□□ -2.33
SMC4-223ENST00000493695 GOLT1AQ6ZVE7 132 aa0.49□□□□□ -2.33
SMC4-223ENST00000493695 OR10K1Q8NGX5 313 aa0.49□□□□□ -2.33
SMC4-223ENST00000493695 TMEM254Q8TBM7 123 aa0.49□□□□□ -2.33
SMC4-223ENST00000493695 ALPK3Q96L96 1907 aa0.48□□□□□ -2.33
SMC4-223ENST00000493695 A0A087WSZ3 146 aa0.48□□□□□ -2.33
SMC4-223ENST00000493695 IGHV1-58A0A0C4DH39 117 aa0.48□□□□□ -2.33
SMC4-223ENST00000493695 B4DSR2 109 aa0.48□□□□□ -2.33
SMC4-223ENST00000493695 E7EUB6 86 aa0.48□□□□□ -2.33
SMC4-223ENST00000493695 NDUFB3O43676 98 aa0.48□□□□□ -2.33
SMC4-223ENST00000493695 DSCR4P56555 118 aaPredicted RBP0.48□□□□□ -2.33
SMC4-223ENST00000493695 HSPE1P61604 102 aaKnown RBP0.48□□□□□ -2.33
SMC4-223ENST00000493695 SPA17Q15506 151 aa0.48□□□□□ -2.33
SMC4-223ENST00000493695 FAM74A1Q5RGS3 127 aa0.48□□□□□ -2.33
SMC4-223ENST00000493695 OR10X1Q8NGY0 326 aa0.48□□□□□ -2.33
SMC4-223ENST00000493695 TEX37Q96LM6 180 aa0.48□□□□□ -2.33
SMC4-223ENST00000493695 LINC00052Q96N35 136 aa0.48□□□□□ -2.33
SMC4-223ENST00000493695 PHRF1Q9P1Y6 1649 aaKnown RBP0.48□□□□□ -2.33
SMC4-223ENST00000493695 EML5Q05BV3 1969 aa0.48□□□□□ -2.33
SMC4-223ENST00000493695 UBR2Q8IWV8 1755 aa0.47□□□□□ -2.33
SMC4-223ENST00000493695 RFX7Q2KHR2 1363 aa0.47□□□□□ -2.33
SMC4-223ENST00000493695 MDN1Q9NU22 5596 aa0.47□□□□□ -2.33
SMC4-223ENST00000493695 TMEM210A6NLX4 147 aa0.47□□□□□ -2.33
SMC4-223ENST00000493695 TAX1BP3O14907 124 aa0.47□□□□□ -2.33
SMC4-223ENST00000493695 HOXA6P31267 233 aa0.47□□□□□ -2.33
SMC4-223ENST00000493695 ST6GALNAC3Q8NDV1 305 aa0.47□□□□□ -2.33
SMC4-223ENST00000493695 OR2T35Q8NGX2 323 aa0.47□□□□□ -2.33
SMC4-223ENST00000493695 CANT1Q8WVQ1 401 aa0.47□□□□□ -2.33
SMC4-223ENST00000493695 TP53RKQ96S44 253 aa0.47□□□□□ -2.33
SMC4-223ENST00000493695 LYSMD1Q96S90 227 aa0.47□□□□□ -2.33
SMC4-223ENST00000493695 SLC25A21Q9BQT8 299 aaPredicted RBP0.47□□□□□ -2.33
SMC4-223ENST00000493695 CECR2Q9BXF3 1484 aa0.47□□□□□ -2.33
SMC4-223ENST00000493695 CASP8AP2Q9UKL3 1982 aa0.46□□□□□ -2.34
SMC4-223ENST00000493695 TRPM1Q7Z4N2 1603 aa0.46□□□□□ -2.34
SMC4-223ENST00000493695 A0A1W2PPM0 123 aa0.46□□□□□ -2.34
SMC4-223ENST00000493695 NCR3O14931 201 aa0.46□□□□□ -2.34
SMC4-223ENST00000493695 GGCTO75223 188 aaKnown RBP0.46□□□□□ -2.34
SMC4-223ENST00000493695 IFNA7P01567 189 aa0.46□□□□□ -2.34
SMC4-223ENST00000493695 CAPZBP47756 277 aa0.46□□□□□ -2.34
SMC4-223ENST00000493695 REEP5Q00765 189 aa0.46□□□□□ -2.34
SMC4-223ENST00000493695 PATE2Q6UY27 113 aa0.46□□□□□ -2.34
SMC4-223ENST00000493695 PLPP5Q8NEB5 264 aa0.46□□□□□ -2.34
SMC4-223ENST00000493695 ENY2Q9NPA8 101 aa0.46□□□□□ -2.34
SMC4-223ENST00000493695 ARMC1Q9NVT9 282 aa0.46□□□□□ -2.34
SMC4-223ENST00000493695 TAS2R7Q9NYW3 318 aa0.46□□□□□ -2.34
SMC4-223ENST00000493695 ORMDL1Q9P0S3 153 aa0.46□□□□□ -2.34
SMC4-223ENST00000493695 FAM32AQ9Y421 112 aaKnown RBP0.46□□□□□ -2.34
SMC4-223ENST00000493695 MYH10P35580 1976 aa0.46□□□□□ -2.34
SMC4-223ENST00000493695 IGLV1-51P01701 117 aa0.45□□□□□ -2.34
SMC4-223ENST00000493695 HSD11B1P28845 292 aa0.45□□□□□ -2.34
SMC4-223ENST00000493695 UBE2BP63146 152 aa0.45□□□□□ -2.34
SMC4-223ENST00000493695 BCL2L15Q5TBC7 163 aa0.45□□□□□ -2.34
SMC4-223ENST00000493695 C2orf82Q6UX34 121 aa0.45□□□□□ -2.34
SMC4-223ENST00000493695 C4orf22Q6V702 233 aa0.45□□□□□ -2.34
SMC4-223ENST00000493695 CCDC94Q9BW85 323 aaPredicted RBP0.45□□□□□ -2.34
SMC4-223ENST00000493695 PCTPQ9UKL6 214 aa0.45□□□□□ -2.34
SMC4-223ENST00000493695 ARL2BPQ9Y2Y0 163 aa0.45□□□□□ -2.34
SMC4-223ENST00000493695 NUP98P52948 1817 aa0.45□□□□□ -2.34
SMC4-223ENST00000493695 SCN8AQ9UQD0 1980 aa0.45□□□□□ -2.34
SMC4-223ENST00000493695 SIP14410 1827 aa0.44□□□□□ -2.34
SMC4-223ENST00000493695 TRAV10A0A0B4J240 114 aa0.44□□□□□ -2.34
SMC4-223ENST00000493695 TLCD2A6NGC4 264 aa0.44□□□□□ -2.34
SMC4-223ENST00000493695 TMEM256-PLSCR3K7ERE1 68 aa0.44□□□□□ -2.34
SMC4-223ENST00000493695 DNAL4O96015 105 aa0.44□□□□□ -2.34
SMC4-223ENST00000493695 SERPINA1P01009 418 aa0.44□□□□□ -2.34
SMC4-223ENST00000493695 TAF1AQ15573 450 aaPredicted RBP0.44□□□□□ -2.34
SMC4-223ENST00000493695 C9orf16Q9BUW7 83 aa0.44□□□□□ -2.34
SMC4-223ENST00000493695 TMEM14CQ9P0S9 112 aa0.44□□□□□ -2.34
SMC4-223ENST00000493695 OPTCQ9UBM4 332 aa0.44□□□□□ -2.34
SMC4-223ENST00000493695 LY96Q9Y6Y9 160 aa0.44□□□□□ -2.34
SMC4-223ENST00000493695 HLA-EP13747 358 aa0.43□□□□□ -2.34
SMC4-223ENST00000493695 DYNLT3P51808 116 aa0.43□□□□□ -2.34
SMC4-223ENST00000493695 HAGHLQ6PII5 290 aaPredicted RBP0.43□□□□□ -2.34
SMC4-223ENST00000493695 EXOC3-AS1Q8N2X6 119 aa0.43□□□□□ -2.34
SMC4-223ENST00000493695 MIA2Q96PC5 1412 aa0.43□□□□□ -2.34
SMC4-223ENST00000493695 APCP25054 2843 aa0.43□□□□□ -2.34
SMC4-223ENST00000493695 MUC5ACP98088 5654 aa0.42□□□□□ -2.34
SMC4-223ENST00000493695 C17orf112F2Z3M2 114 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms