RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 LDLRAD2Q5SZI1 272 aa3.36□□□□□ -1.87
R3HDM1-216ENST00000483065 TEN1Q86WV5 123 aa3.36□□□□□ -1.87
R3HDM1-216ENST00000483065 UBALD1Q8TB05 177 aa3.36□□□□□ -1.87
R3HDM1-216ENST00000483065 IER3IP1Q9Y5U9 82 aa3.36□□□□□ -1.87
R3HDM1-216ENST00000483065 DOCK3Q8IZD9 2030 aa3.36□□□□□ -1.87
R3HDM1-216ENST00000483065 WDR81Q562E7 1941 aa3.35□□□□□ -1.87
R3HDM1-216ENST00000483065 TCRAP04437 139 aa3.35□□□□□ -1.87
R3HDM1-216ENST00000483065 TRGC1P0CF51 173 aa3.35□□□□□ -1.87
R3HDM1-216ENST00000483065 ZNF705BP0CI00 300 aaPredicted RBP3.35□□□□□ -1.87
R3HDM1-216ENST00000483065 CCL5P13501 91 aa3.35□□□□□ -1.87
R3HDM1-216ENST00000483065 CDK6Q00534 326 aa3.35□□□□□ -1.87
R3HDM1-216ENST00000483065 EBI3Q14213 229 aa3.35□□□□□ -1.87
R3HDM1-216ENST00000483065 CCSMST1Q4G0I0 132 aa3.35□□□□□ -1.87
R3HDM1-216ENST00000483065 LYZL1Q6UWQ5 148 aa3.35□□□□□ -1.87
R3HDM1-216ENST00000483065 FAM216BQ8N7L0 139 aa3.35□□□□□ -1.87
R3HDM1-216ENST00000483065 ST20-AS1Q8NBB2 130 aa3.35□□□□□ -1.87
R3HDM1-216ENST00000483065 VOPP1Q96AW1 172 aa3.35□□□□□ -1.87
R3HDM1-216ENST00000483065 RAB37Q96AX2 223 aa3.35□□□□□ -1.87
R3HDM1-216ENST00000483065 NAA60Q9H7X0 242 aa3.35□□□□□ -1.87
R3HDM1-216ENST00000483065 CACNA1IQ9P0X4 2223 aa3.35□□□□□ -1.87
R3HDM1-216ENST00000483065 COL5A2P05997 1499 aaPredicted RBP3.35□□□□□ -1.87
R3HDM1-216ENST00000483065 CEP164Q9UPV0 1460 aa3.35□□□□□ -1.87
R3HDM1-216ENST00000483065 ZNFX1Q9P2E3 1918 aaKnown RBP3.34□□□□□ -1.87
R3HDM1-216ENST00000483065 TTC37Q6PGP7 1564 aa3.34□□□□□ -1.87
R3HDM1-216ENST00000483065 IGKV6D-41A0A0C4DH26 115 aa3.34□□□□□ -1.87
R3HDM1-216ENST00000483065 TNFP01375 233 aa3.34□□□□□ -1.87
R3HDM1-216ENST00000483065 HBDP02042 147 aa3.34□□□□□ -1.87
R3HDM1-216ENST00000483065 IGKV1-16P04430 117 aa3.34□□□□□ -1.87
R3HDM1-216ENST00000483065 ZNF883P0CG24 379 aa3.34□□□□□ -1.87
R3HDM1-216ENST00000483065 SAA1P0DJI8 122 aaPredicted RBP3.34□□□□□ -1.87
R3HDM1-216ENST00000483065 MUC1P15941 1255 aaPredicted RBP3.34□□□□□ -1.87
R3HDM1-216ENST00000483065 ZNF19P17023 458 aa3.34□□□□□ -1.87
R3HDM1-216ENST00000483065 TMEM91Q6ZNR0 172 aa3.34□□□□□ -1.87
R3HDM1-216ENST00000483065 KLF14Q8TD94 323 aaPredicted RBP3.34□□□□□ -1.87
R3HDM1-216ENST00000483065 DIRC1Q969H9 104 aa3.34□□□□□ -1.87
R3HDM1-216ENST00000483065 CIB3Q96Q77 187 aaPredicted RBP3.34□□□□□ -1.87
R3HDM1-216ENST00000483065 IMMP2LQ96T52 175 aa3.34□□□□□ -1.87
R3HDM1-216ENST00000483065 SCN10AQ9Y5Y9 1956 aa3.34□□□□□ -1.88
R3HDM1-216ENST00000483065 KIAA1107Q9UPP5 1409 aa3.34□□□□□ -1.88
R3HDM1-216ENST00000483065 CECR2Q9BXF3 1484 aa3.34□□□□□ -1.88
R3HDM1-216ENST00000483065 XIRP1Q702N8 1843 aaKnown RBP3.33□□□□□ -1.88
R3HDM1-216ENST00000483065 CACNA1SQ13698 1873 aa3.33□□□□□ -1.88
R3HDM1-216ENST00000483065 CHD4Q14839 1912 aa3.33□□□□□ -1.88
R3HDM1-216ENST00000483065 IGKV1OR2-108A0A075B7D4 117 aa3.33□□□□□ -1.88
R3HDM1-216ENST00000483065 IGKV3D-20A0A0C4DH25 116 aa3.33□□□□□ -1.88
R3HDM1-216ENST00000483065 LOC107986453A0A1B0GWG9 222 aa3.33□□□□□ -1.88
R3HDM1-216ENST00000483065 A8MUU9 505 aa3.33□□□□□ -1.88
R3HDM1-216ENST00000483065 H3BT86 120 aa3.33□□□□□ -1.88
R3HDM1-216ENST00000483065 COL8A2P25067 703 aa3.33□□□□□ -1.88
R3HDM1-216ENST00000483065 COL5A1-AS1Q5SY13 56 aa3.33□□□□□ -1.88
R3HDM1-216ENST00000483065 Q6ZR54 194 aa3.33□□□□□ -1.88
R3HDM1-216ENST00000483065 C10orf111Q8N326 155 aa3.33□□□□□ -1.88
R3HDM1-216ENST00000483065 SDF2Q99470 211 aa3.33□□□□□ -1.88
R3HDM1-216ENST00000483065 RPRMQ9NS64 109 aa3.33□□□□□ -1.88
R3HDM1-216ENST00000483065 TAS2R8Q9NYW2 309 aa3.33□□□□□ -1.88
R3HDM1-216ENST00000483065 COMMD3Q9UBI1 195 aa3.33□□□□□ -1.88
R3HDM1-216ENST00000483065 KTN1Q86UP2 1357 aaKnown RBP3.33□□□□□ -1.88
R3HDM1-216ENST00000483065 RPRD2Q5VT52 1461 aaKnown RBP3.33□□□□□ -1.88
R3HDM1-216ENST00000483065 MAPKBP1O60336 1514 aa3.33□□□□□ -1.88
R3HDM1-216ENST00000483065 UBR2Q8IWV8 1755 aa3.33□□□□□ -1.88
R3HDM1-216ENST00000483065 LOXHD1Q8IVV2 1947 aa3.32□□□□□ -1.88
R3HDM1-216ENST00000483065 TRBV20-1A0A075B6N2 111 aa3.32□□□□□ -1.88
R3HDM1-216ENST00000483065 TRGV5A0A0B4J1U4 118 aa3.32□□□□□ -1.88
R3HDM1-216ENST00000483065 TRBV10-2A0A0K0K1G8 114 aa3.32□□□□□ -1.88
R3HDM1-216ENST00000483065 C19orf71A6NCJ1 209 aa3.32□□□□□ -1.88
R3HDM1-216ENST00000483065 FNDC10F2Z333 226 aa3.32□□□□□ -1.88
R3HDM1-216ENST00000483065 SLC25A5P05141 298 aaKnown RBP3.32□□□□□ -1.88
R3HDM1-216ENST00000483065 FOXA1P55317 472 aa3.32□□□□□ -1.88
R3HDM1-216ENST00000483065 DYNLT1P63172 113 aa3.32□□□□□ -1.88
R3HDM1-216ENST00000483065 DIAPH2-AS1Q14236 149 aa3.32□□□□□ -1.88
R3HDM1-216ENST00000483065 ASB16-AS1Q495Z4 193 aa3.32□□□□□ -1.88
R3HDM1-216ENST00000483065 C2orf91Q6ZV80 131 aa3.32□□□□□ -1.88
R3HDM1-216ENST00000483065 AAED1Q7RTV5 226 aa3.32□□□□□ -1.88
R3HDM1-216ENST00000483065 ADM2Q7Z4H4 148 aa3.32□□□□□ -1.88
R3HDM1-216ENST00000483065 MRPS24Q96EL2 167 aaKnown RBP3.32□□□□□ -1.88
R3HDM1-216ENST00000483065 MRPL57Q9BQC6 102 aaKnown RBP3.32□□□□□ -1.88
R3HDM1-216ENST00000483065 Q9H521 79 aa3.32□□□□□ -1.88
R3HDM1-216ENST00000483065 FAM215AQ9Y5M1 114 aa3.32□□□□□ -1.88
R3HDM1-216ENST00000483065 RALGAPA2Q2PPJ7 1873 aa3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 ATAD5Q96QE3 1844 aa3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 ADAMTSL1Q8N6G6 1762 aa3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 DLC1Q96QB1 1528 aa3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 MYOM2P54296 1465 aa3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 NSD3Q9BZ95 1437 aa3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 IGKV1D-37A0A075B6S9 117 aa3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 TRAV12-2A0A075B6T6 113 aa3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 TRAV7A0A075B6U4 112 aa3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 FAM236AA0A1B0GUQ0 79 aa3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 FAM236BA0A1B0GV22 79 aa3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 C7orf66A4D0T2 115 aa3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 C17orf112F2Z3M2 114 aa3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 K7ERJ3 54 aa3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 TIMM17BO60830 172 aa3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 ETV6P41212 452 aa3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 RPL28P46779 137 aaKnown RBP3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 ZNF660Q6AZW8 331 aaPredicted RBP3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 SOSTDC1Q6X4U4 206 aa3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 Q6ZS52 159 aa3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 SFT2D1Q8WV19 159 aa3.31□□□□□ -1.88
R3HDM1-216ENST00000483065 TAS2R4Q9NYW5 299 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms