RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 PATE2Q6UY27 113 aa10.27□□□□□ -0.77
VPS52-218ENST00000482399 OSR1Q8TAX0 266 aaPredicted RBP10.27□□□□□ -0.77
VPS52-218ENST00000482399 FAM167A-AS1Q96KT0 104 aa10.27□□□□□ -0.77
VPS52-218ENST00000482399 PPP1R14DQ9NXH3 145 aa10.27□□□□□ -0.77
VPS52-218ENST00000482399 ATRXP46100 2492 aa10.27□□□□□ -0.77
VPS52-218ENST00000482399 ZNF474Q6S9Z5 364 aaPredicted RBP10.27□□□□□ -0.77
VPS52-218ENST00000482399 LINC00322Q6ZN03 302 aaPredicted RBP10.27□□□□□ -0.77
VPS52-218ENST00000482399 RASL11BQ9BPW5 248 aa10.27□□□□□ -0.77
VPS52-218ENST00000482399 FBXL15Q9H469 300 aa10.27□□□□□ -0.77
VPS52-218ENST00000482399 INSIG2Q9Y5U4 225 aa10.27□□□□□ -0.77
VPS52-218ENST00000482399 IGHV1-24A0A0C4DH33 117 aa10.26□□□□□ -0.77
VPS52-218ENST00000482399 LYNX1G3V0Z9 82 aa10.26□□□□□ -0.77
VPS52-218ENST00000482399 HLA-DRB1P01911 266 aa10.26□□□□□ -0.77
VPS52-218ENST00000482399 LYNX1P0DP58 116 aa10.26□□□□□ -0.77
VPS52-218ENST00000482399 WT1P19544 449 aaPredicted RBP10.26□□□□□ -0.77
VPS52-218ENST00000482399 CNTFRP26992 372 aa10.26□□□□□ -0.77
VPS52-218ENST00000482399 RIPPLY3P57055 190 aa10.26□□□□□ -0.77
VPS52-218ENST00000482399 Q5PR19 223 aa10.26□□□□□ -0.77
VPS52-218ENST00000482399 CLEC2AQ6UVW9 174 aa10.26□□□□□ -0.77
VPS52-218ENST00000482399 S100A7AQ86SG5 101 aa10.26□□□□□ -0.77
VPS52-218ENST00000482399 CACNG8Q8WXS5 425 aa10.26□□□□□ -0.77
VPS52-218ENST00000482399 IGF2BP2-AS1Q96M15 143 aa10.26□□□□□ -0.77
VPS52-218ENST00000482399 MRPL27Q9P0M9 148 aaKnown RBP10.26□□□□□ -0.77
VPS52-218ENST00000482399 HIGD1AQ9Y241 93 aa10.26□□□□□ -0.77
VPS52-218ENST00000482399 PPIAL4EA0A075B759 164 aa10.26□□□□□ -0.77
VPS52-218ENST00000482399 IGHV1-69-2A0A0G2JMI3 117 aa10.26□□□□□ -0.77
VPS52-218ENST00000482399 GAGE10A6NGK3 116 aa10.26□□□□□ -0.77
VPS52-218ENST00000482399 PPIAL4FP0DN26 164 aa10.26□□□□□ -0.77
VPS52-218ENST00000482399 FCER1GP30273 86 aa10.26□□□□□ -0.77
VPS52-218ENST00000482399 SPATA12Q7Z6I5 190 aa10.26□□□□□ -0.77
VPS52-218ENST00000482399 IGHV2-26A0A0B4J1V2 119 aa10.25□□□□□ -0.77
VPS52-218ENST00000482399 H0YJW9 148 aa10.25□□□□□ -0.77
VPS52-218ENST00000482399 M0R3E3 92 aa10.25□□□□□ -0.77
VPS52-218ENST00000482399 FAM162BQ5T6X4 162 aa10.25□□□□□ -0.77
VPS52-218ENST00000482399 C12orf54Q6X4T0 127 aa10.25□□□□□ -0.77
VPS52-218ENST00000482399 RBPMS2Q6ZRY4 209 aaKnown RBP10.25□□□□□ -0.77
VPS52-218ENST00000482399 SLC25A48Q6ZT89 311 aaKnown RBP10.25□□□□□ -0.77
VPS52-218ENST00000482399 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.25□□□□□ -0.77
VPS52-218ENST00000482399 RITA1Q96K30 269 aa10.25□□□□□ -0.77
VPS52-218ENST00000482399 ANKRD11Q6UB99 2663 aaPredicted RBP10.25□□□□□ -0.77
VPS52-218ENST00000482399 LAMA5O15230 3695 aa10.25□□□□□ -0.77
VPS52-218ENST00000482399 A0A1W2PPI3 338 aa10.25□□□□□ -0.77
VPS52-218ENST00000482399 CSN1S1P47710 185 aa10.25□□□□□ -0.77
VPS52-218ENST00000482399 LYPD2Q6UXB3 125 aa10.25□□□□□ -0.77
VPS52-218ENST00000482399 C5orf17Q8NAS9 161 aa10.25□□□□□ -0.77
VPS52-218ENST00000482399 HSPB8Q9UJY1 196 aa10.25□□□□□ -0.77
VPS52-218ENST00000482399 MRPS16Q9Y3D3 137 aaKnown RBP10.25□□□□□ -0.77
VPS52-218ENST00000482399 IGHV3-23P01764 117 aa10.25□□□□□ -0.77
VPS52-218ENST00000482399 LIPFP07098 398 aa10.25□□□□□ -0.77
VPS52-218ENST00000482399 FCGR2BP31994 310 aaPredicted RBP10.25□□□□□ -0.77
VPS52-218ENST00000482399 RPL24P83731 157 aaKnown RBP10.25□□□□□ -0.77
VPS52-218ENST00000482399 KLF17Q5JT82 389 aaPredicted RBP10.25□□□□□ -0.77
VPS52-218ENST00000482399 TMEM108Q6UXF1 575 aa10.25□□□□□ -0.77
VPS52-218ENST00000482399 STXBP6Q8NFX7 210 aa10.25□□□□□ -0.77
VPS52-218ENST00000482399 FXYD5Q96DB9 178 aa10.25□□□□□ -0.77
VPS52-218ENST00000482399 ARHGAP32A7KAX9 2087 aa10.24□□□□□ -0.77
VPS52-218ENST00000482399 VWC2LB2RUY7 222 aa10.24□□□□□ -0.77
VPS52-218ENST00000482399 TMEM200BQ69YZ2 307 aa10.24□□□□□ -0.77
VPS52-218ENST00000482399 PLSCR4Q9NRQ2 329 aa10.24□□□□□ -0.77
VPS52-218ENST00000482399 NDUFA4L2Q9NRX3 87 aa10.24□□□□□ -0.77
VPS52-218ENST00000482399 K7EQM0 130 aa10.24□□□□□ -0.77
VPS52-218ENST00000482399 KLK10O43240 276 aa10.24□□□□□ -0.77
VPS52-218ENST00000482399 ARMS2P0C7Q2 107 aa10.24□□□□□ -0.77
VPS52-218ENST00000482399 C1orf162Q8NEQ5 155 aaPredicted RBP10.24□□□□□ -0.77
VPS52-218ENST00000482399 OR4F17Q8NGA8 305 aa10.24□□□□□ -0.77
VPS52-218ENST00000482399 RPEQ96AT9 228 aa10.24□□□□□ -0.77
VPS52-218ENST00000482399 SPRY4Q9C004 299 aa10.24□□□□□ -0.77
VPS52-218ENST00000482399 THYN1Q9P016 225 aa10.24□□□□□ -0.77
VPS52-218ENST00000482399 VSTM5A8MXK1 200 aa10.23□□□□□ -0.77
VPS52-218ENST00000482399 CRYABP02511 175 aaKnown RBP10.23□□□□□ -0.77
VPS52-218ENST00000482399 TCRAP04437 139 aa10.23□□□□□ -0.77
VPS52-218ENST00000482399 TIMM23BQ5SRD1 257 aa10.23□□□□□ -0.77
VPS52-218ENST00000482399 MRPL52Q86TS9 123 aaKnown RBP10.23□□□□□ -0.77
VPS52-218ENST00000482399 IGLC7A0M8Q6 106 aa10.23□□□□□ -0.77
VPS52-218ENST00000482399 H3BUT2 72 aa10.23□□□□□ -0.77
VPS52-218ENST00000482399 CDX4O14627 284 aaPredicted RBP10.23□□□□□ -0.77
VPS52-218ENST00000482399 CD40P25942 277 aa10.23□□□□□ -0.77
VPS52-218ENST00000482399 C22orf34Q6ZV56 151 aa10.23□□□□□ -0.77
VPS52-218ENST00000482399 Q71RC1 249 aaPredicted RBP10.23□□□□□ -0.77
VPS52-218ENST00000482399 GTSF1Q8WW33 167 aa10.23□□□□□ -0.77
VPS52-218ENST00000482399 RALYQ9UKM9 306 aaKnown RBP10.23□□□□□ -0.77
VPS52-218ENST00000482399 A0A1B0GUT8 65 aa10.23□□□□□ -0.77
VPS52-218ENST00000482399 C7orf71A4D174 169 aa10.23□□□□□ -0.77
VPS52-218ENST00000482399 C2orf70A6NJV1 201 aa10.23□□□□□ -0.77
VPS52-218ENST00000482399 GPR183P32249 361 aa10.23□□□□□ -0.77
VPS52-218ENST00000482399 ZNF788Q6ZQV5 615 aa10.23□□□□□ -0.77
VPS52-218ENST00000482399 IGFL4Q6B9Z1 124 aa10.22□□□□□ -0.77
VPS52-218ENST00000482399 C17orf77Q96MU5 243 aa10.22□□□□□ -0.77
VPS52-218ENST00000482399 ONECUT1Q9UBC0 465 aa10.22□□□□□ -0.77
VPS52-218ENST00000482399 LINC00312Q9Y6C7 94 aa10.22□□□□□ -0.77
VPS52-218ENST00000482399 IGHV3OR16-13A0A075B7E8 117 aa10.22□□□□□ -0.77
VPS52-218ENST00000482399 IGHV3-74A0A0B4J1X5 117 aa10.22□□□□□ -0.77
VPS52-218ENST00000482399 SMKR1H3BMG3 65 aa10.22□□□□□ -0.77
VPS52-218ENST00000482399 IL4P05112 153 aa10.22□□□□□ -0.77
VPS52-218ENST00000482399 CFHR2P36980 270 aa10.22□□□□□ -0.77
VPS52-218ENST00000482399 RIGQ13278 110 aa10.22□□□□□ -0.77
VPS52-218ENST00000482399 RUSC1-AS1Q66K80 236 aa10.22□□□□□ -0.77
VPS52-218ENST00000482399 NCR2O95944 276 aa10.22□□□□□ -0.77
VPS52-218ENST00000482399 IGLV1-44P01699 117 aa10.22□□□□□ -0.77
VPS52-218ENST00000482399 SP9P0CG40 484 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms