RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	C7orf50	Q9BRJ6	194 aa	Known RBP	10.89	□□□□□ -0.67
CCNL1-222	ENST00000479596	KLK5	Q9Y337	293 aa	Predicted RBP	10.89	□□□□□ -0.67
CCNL1-222	ENST00000479596	LY6G6C	O95867	125 aa		10.88	□□□□□ -0.67
CCNL1-222	ENST00000479596	HLA-DRB4	P13762	266 aa		10.88	□□□□□ -0.67
CCNL1-222	ENST00000479596	GATA2	P23769	480 aa	Predicted RBP	10.88	□□□□□ -0.67
CCNL1-222	ENST00000479596	NKX2-1	P43699	371 aa	Predicted RBP	10.88	□□□□□ -0.67
CCNL1-222	ENST00000479596	PAX9	P55771	341 aa		10.88	□□□□□ -0.67
CCNL1-222	ENST00000479596	FBXL17	Q9UF56	701 aa		10.88	□□□□□ -0.67
CCNL1-222	ENST00000479596	STRAP	Q9Y3F4	350 aa	Known RBP	10.88	□□□□□ -0.67
CCNL1-222	ENST00000479596	HLA-DRB4	X5D2U9	266 aa		10.88	□□□□□ -0.67
CCNL1-222	ENST00000479596	ELOA3C	A0A087WX78	387 aa	Predicted RBP	10.87	□□□□□ -0.67
CCNL1-222	ENST00000479596	CENPX	A8MT69	81 aa		10.87	□□□□□ -0.67
CCNL1-222	ENST00000479596	SSSCA1	O60232	199 aa		10.87	□□□□□ -0.67
CCNL1-222	ENST00000479596	CCNK	O75909	580 aa		10.87	□□□□□ -0.67
CCNL1-222	ENST00000479596	MIF	P14174	115 aa		10.87	□□□□□ -0.67
CCNL1-222	ENST00000479596	C4orf46	Q504U0	113 aa		10.87	□□□□□ -0.67
CCNL1-222	ENST00000479596	MITD1	Q8WV92	249 aa		10.87	□□□□□ -0.67
CCNL1-222	ENST00000479596	MFF	Q9GZY8	342 aa		10.87	□□□□□ -0.67
CCNL1-222	ENST00000479596	HRH4	Q9H3N8	390 aa		10.87	□□□□□ -0.67
CCNL1-222	ENST00000479596	PFDN2	Q9UHV9	154 aa		10.87	□□□□□ -0.67
CCNL1-222	ENST00000479596	CFD	P00746	253 aa	Predicted RBP	10.86	□□□□□ -0.67
CCNL1-222	ENST00000479596	PSMB3	P49720	205 aa		10.86	□□□□□ -0.67
CCNL1-222	ENST00000479596	SMIM8	Q96KF7	97 aa		10.86	□□□□□ -0.67
CCNL1-222	ENST00000479596	C20orf85	Q9H1P6	137 aa		10.86	□□□□□ -0.67
CCNL1-222	ENST00000479596	SLC25A32	Q9H2D1	315 aa		10.86	□□□□□ -0.67
CCNL1-222	ENST00000479596	SAV1	Q9H4B6	383 aa	Predicted RBP	10.86	□□□□□ -0.67
CCNL1-222	ENST00000479596	PSENEN	Q9NZ42	101 aa		10.86	□□□□□ -0.67
CCNL1-222	ENST00000479596	TBC1D24	Q9ULP9	559 aa		10.86	□□□□□ -0.67
CCNL1-222	ENST00000479596	SLC45A2	Q9UMX9	530 aa		10.86	□□□□□ -0.67
CCNL1-222	ENST00000479596	ZNF98	A6NK75	572 aa		10.85	□□□□□ -0.67
CCNL1-222	ENST00000479596	IFNA21	P01568	189 aa		10.85	□□□□□ -0.67
CCNL1-222	ENST00000479596	AKR1C1	Q04828	323 aa		10.85	□□□□□ -0.67
CCNL1-222	ENST00000479596	IAH1	Q2TAA2	248 aa	Predicted RBP	10.85	□□□□□ -0.67
CCNL1-222	ENST00000479596	TMEM14EP	Q6UXP3	125 aa		10.85	□□□□□ -0.67
CCNL1-222	ENST00000479596	TMEM144	Q7Z5S9	345 aa		10.85	□□□□□ -0.67
CCNL1-222	ENST00000479596	OR8I2	Q8N0Y5	310 aa		10.85	□□□□□ -0.67
CCNL1-222	ENST00000479596	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	10.85	□□□□□ -0.67
CCNL1-222	ENST00000479596	BPIFC	Q8NFQ6	507 aa		10.85	□□□□□ -0.67
CCNL1-222	ENST00000479596	PPP1R14B	Q96C90	147 aa		10.85	□□□□□ -0.67
CCNL1-222	ENST00000479596	C20orf173	Q96LM9	149 aa		10.85	□□□□□ -0.67
CCNL1-222	ENST00000479596	LINC00052	Q96N35	136 aa		10.85	□□□□□ -0.67
CCNL1-222	ENST00000479596	NDUFA13	Q9P0J0	144 aa		10.85	□□□□□ -0.67
CCNL1-222	ENST00000479596	XCL2	Q9UBD3	114 aa		10.85	□□□□□ -0.67
CCNL1-222	ENST00000479596	RCL1	Q9Y2P8	373 aa	Known RBP	10.85	□□□□□ -0.67
CCNL1-222	ENST00000479596	LYRM1	O43325	122 aa		10.84	□□□□□ -0.67
CCNL1-222	ENST00000479596	ORM2	P19652	201 aa		10.84	□□□□□ -0.67
CCNL1-222	ENST00000479596	FOXI2	Q6ZQN5	318 aa		10.84	□□□□□ -0.67
CCNL1-222	ENST00000479596	ZNF709	Q8N972	641 aa		10.84	□□□□□ -0.67
CCNL1-222	ENST00000479596	CELA1	Q9UNI1	258 aa		10.84	□□□□□ -0.67
CCNL1-222	ENST00000479596		F6UB75	175 aa		10.83	□□□□□ -0.68
CCNL1-222	ENST00000479596	ISLR	O14498	428 aa		10.83	□□□□□ -0.68
CCNL1-222	ENST00000479596	SCGB1D2	O95969	90 aa		10.83	□□□□□ -0.68
CCNL1-222	ENST00000479596	ID1	P41134	155 aa		10.83	□□□□□ -0.68
CCNL1-222	ENST00000479596	NUTF2	P61970	127 aa	Known RBP	10.83	□□□□□ -0.68
CCNL1-222	ENST00000479596	CNPY1	Q3B7I2	92 aa		10.83	□□□□□ -0.68
CCNL1-222	ENST00000479596	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		10.83	□□□□□ -0.68
CCNL1-222	ENST00000479596	ZNF705A	Q6ZN79	300 aa	Predicted RBP	10.83	□□□□□ -0.68
CCNL1-222	ENST00000479596	CYP2G1P	Q6ZSU1	146 aa		10.83	□□□□□ -0.68
CCNL1-222	ENST00000479596	OR1B1	Q8NGR6	318 aa		10.83	□□□□□ -0.68
CCNL1-222	ENST00000479596	CLUHP3	Q96NS8	147 aa		10.83	□□□□□ -0.68
CCNL1-222	ENST00000479596	C1QTNF4	Q9BXJ3	329 aa		10.83	□□□□□ -0.68
CCNL1-222	ENST00000479596	SLC25A22	Q9H936	323 aa		10.83	□□□□□ -0.68
CCNL1-222	ENST00000479596	SMCO3	A2RU48	225 aa		10.82	□□□□□ -0.68
CCNL1-222	ENST00000479596		H3BRN7	92 aa		10.82	□□□□□ -0.68
CCNL1-222	ENST00000479596	CCS	O14618	274 aa		10.82	□□□□□ -0.68
CCNL1-222	ENST00000479596	IGKV3-20	P01619	116 aa		10.82	□□□□□ -0.68
CCNL1-222	ENST00000479596	MBP	P02686	304 aa	Predicted RBP	10.82	□□□□□ -0.68
CCNL1-222	ENST00000479596	TCRB	P04435	133 aa		10.82	□□□□□ -0.68
CCNL1-222	ENST00000479596	METTL15P1	P0C7V9	234 aa		10.82	□□□□□ -0.68
CCNL1-222	ENST00000479596	HLA-DMB	P28068	263 aa		10.82	□□□□□ -0.68
CCNL1-222	ENST00000479596	FXYD7	P58549	80 aa		10.82	□□□□□ -0.68
CCNL1-222	ENST00000479596	RRAS2	P62070	204 aa	Predicted RBP	10.82	□□□□□ -0.68
CCNL1-222	ENST00000479596	DLK1	P80370	383 aa		10.82	□□□□□ -0.68
CCNL1-222	ENST00000479596	LGALS9C	Q6DKI2	356 aa		10.82	□□□□□ -0.68
CCNL1-222	ENST00000479596		Q6ZTC4	211 aa		10.82	□□□□□ -0.68
CCNL1-222	ENST00000479596	RPP25L	Q8N5L8	163 aa	Known RBP	10.82	□□□□□ -0.68
CCNL1-222	ENST00000479596	C2CD4C	Q8TF44	421 aa		10.82	□□□□□ -0.68
CCNL1-222	ENST00000479596	RSG1	Q9BU20	258 aa		10.82	□□□□□ -0.68
CCNL1-222	ENST00000479596	TMEM147	Q9BVK8	224 aa		10.82	□□□□□ -0.68
CCNL1-222	ENST00000479596	SCRT1	Q9BWW7	348 aa		10.82	□□□□□ -0.68
CCNL1-222	ENST00000479596	DOK5	Q9P104	306 aa		10.82	□□□□□ -0.68
CCNL1-222	ENST00000479596	TRAV6	A0A075B6T7	132 aa		10.81	□□□□□ -0.68
CCNL1-222	ENST00000479596	TRAV8-2	A0A0B4J237	113 aa		10.81	□□□□□ -0.68
CCNL1-222	ENST00000479596		A0A0J9YX75	114 aa		10.81	□□□□□ -0.68
CCNL1-222	ENST00000479596	C7orf66	A4D0T2	115 aa		10.81	□□□□□ -0.68
CCNL1-222	ENST00000479596	ZNF705F	A8MVS1	300 aa	Predicted RBP	10.81	□□□□□ -0.68
CCNL1-222	ENST00000479596	TSC22D2	O75157	780 aa		10.81	□□□□□ -0.68
CCNL1-222	ENST00000479596	ZNF705D	P0CH99	300 aa	Predicted RBP	10.81	□□□□□ -0.68
CCNL1-222	ENST00000479596	ZNF705B	P0CI00	300 aa	Predicted RBP	10.81	□□□□□ -0.68
CCNL1-222	ENST00000479596	GALR1	P47211	349 aa		10.81	□□□□□ -0.68
CCNL1-222	ENST00000479596	MEOX2	P50222	304 aa		10.81	□□□□□ -0.68
CCNL1-222	ENST00000479596	TAS2R30	P59541	319 aa		10.81	□□□□□ -0.68
CCNL1-222	ENST00000479596	PLP1	P60201	277 aa		10.81	□□□□□ -0.68
CCNL1-222	ENST00000479596	ARL16	Q0P5N6	197 aa		10.81	□□□□□ -0.68
CCNL1-222	ENST00000479596	C16orf92	Q96LL3	132 aa		10.81	□□□□□ -0.68
CCNL1-222	ENST00000479596	SHANK2-AS3	Q9BTD1	123 aa		10.81	□□□□□ -0.68
CCNL1-222	ENST00000479596	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	10.81	□□□□□ -0.68
CCNL1-222	ENST00000479596	SLC35B3	Q9H1N7	401 aa		10.81	□□□□□ -0.68
CCNL1-222	ENST00000479596	NUDT15	Q9NV35	164 aa		10.81	□□□□□ -0.68
CCNL1-222	ENST00000479596	GSKIP	Q9P0R6	139 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms