RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 HLA-DRB4X5D2U9 266 aa11.13□□□□□ -0.63
HDAC1-206ENST00000476391 IGKV3D-15A0A087WSY6 115 aa11.12□□□□□ -0.63
HDAC1-206ENST00000476391 PGPA6NDG6 321 aa11.12□□□□□ -0.63
HDAC1-206ENST00000476391 SSR4P51571 173 aa11.12□□□□□ -0.63
HDAC1-206ENST00000476391 C12orf74Q32Q52 190 aa11.12□□□□□ -0.63
HDAC1-206ENST00000476391 FAM90A1Q86YD7 464 aa11.12□□□□□ -0.63
HDAC1-206ENST00000476391 OR1L8Q8NGR8 309 aa11.12□□□□□ -0.63
HDAC1-206ENST00000476391 RITA1Q96K30 269 aa11.12□□□□□ -0.63
HDAC1-206ENST00000476391 NPIPB5A8MRT5 1133 aa11.11□□□□□ -0.63
HDAC1-206ENST00000476391 B5MCH6 92 aa11.11□□□□□ -0.63
HDAC1-206ENST00000476391 THBDP07204 575 aa11.11□□□□□ -0.63
HDAC1-206ENST00000476391 RRN3P1Q2M238 152 aa11.11□□□□□ -0.63
HDAC1-206ENST00000476391 RPL39P5Q59GN2 51 aa11.11□□□□□ -0.63
HDAC1-206ENST00000476391 TMEM178AQ8NBL3 297 aa11.11□□□□□ -0.63
HDAC1-206ENST00000476391 RNF208Q9H0X6 261 aa11.11□□□□□ -0.63
HDAC1-206ENST00000476391 GNG12Q9UBI6 72 aa11.11□□□□□ -0.63
HDAC1-206ENST00000476391 FSTL3O95633 263 aa11.11□□□□□ -0.63
HDAC1-206ENST00000476391 MT-CO3P00414 261 aa11.11□□□□□ -0.63
HDAC1-206ENST00000476391 POU2AF1Q16633 256 aa11.11□□□□□ -0.63
HDAC1-206ENST00000476391 Q6AWC8 147 aa11.11□□□□□ -0.63
HDAC1-206ENST00000476391 OSR1Q8TAX0 266 aaPredicted RBP11.11□□□□□ -0.63
HDAC1-206ENST00000476391 RND1Q92730 232 aa11.11□□□□□ -0.63
HDAC1-206ENST00000476391 TANC2Q9HCD6 1990 aa11.11□□□□□ -0.63
HDAC1-206ENST00000476391 SDK2Q58EX2 2172 aa11.1□□□□□ -0.63
HDAC1-206ENST00000476391 IGKV2D-26A0A0A0MRZ7 120 aa11.1□□□□□ -0.63
HDAC1-206ENST00000476391 PAX8Q06710 450 aa11.1□□□□□ -0.63
HDAC1-206ENST00000476391 PCOLCEQ15113 449 aa11.1□□□□□ -0.63
HDAC1-206ENST00000476391 ABHD17BQ5VST6 288 aa11.1□□□□□ -0.63
HDAC1-206ENST00000476391 ZMAT4Q9H898 229 aa11.1□□□□□ -0.63
HDAC1-206ENST00000476391 UFC1Q9Y3C8 167 aa11.1□□□□□ -0.63
HDAC1-206ENST00000476391 C16orf97H3BN30 126 aa11.1□□□□□ -0.63
HDAC1-206ENST00000476391 SCRG1O75711 98 aa11.1□□□□□ -0.63
HDAC1-206ENST00000476391 ARMS2P0C7Q2 107 aa11.1□□□□□ -0.63
HDAC1-206ENST00000476391 MNX1P50219 401 aaPredicted RBP11.1□□□□□ -0.63
HDAC1-206ENST00000476391 ZFAND6Q6FIF0 208 aa11.1□□□□□ -0.63
HDAC1-206ENST00000476391 PATE2Q6UY27 113 aa11.1□□□□□ -0.63
HDAC1-206ENST00000476391 ZNF493Q6ZR52 646 aa11.1□□□□□ -0.63
HDAC1-206ENST00000476391 RAX2Q96IS3 184 aa11.1□□□□□ -0.63
HDAC1-206ENST00000476391 PRELID3AQ96N28 172 aa11.1□□□□□ -0.63
HDAC1-206ENST00000476391 DKK2Q9UBU2 259 aa11.1□□□□□ -0.63
HDAC1-206ENST00000476391 HHLA3Q9XRX5 114 aa11.1□□□□□ -0.63
HDAC1-206ENST00000476391 U3KQK5 164 aa11.1□□□□□ -0.63
HDAC1-206ENST00000476391 NDUFS7O75251 213 aa11.09□□□□□ -0.63
HDAC1-206ENST00000476391 CELA2AP08217 269 aa11.09□□□□□ -0.63
HDAC1-206ENST00000476391 MLANAQ16655 118 aa11.09□□□□□ -0.63
HDAC1-206ENST00000476391 CFAP126Q5VTH2 177 aa11.09□□□□□ -0.63
HDAC1-206ENST00000476391 HEATR1Q9H583 2144 aaKnown RBP11.09□□□□□ -0.63
HDAC1-206ENST00000476391 TCRAP04437 139 aa11.09□□□□□ -0.63
HDAC1-206ENST00000476391 GRPP07492 148 aa11.09□□□□□ -0.63
HDAC1-206ENST00000476391 RNASE2P10153 161 aaKnown RBP11.09□□□□□ -0.63
HDAC1-206ENST00000476391 FOXG1P55316 489 aaPredicted RBP11.09□□□□□ -0.63
HDAC1-206ENST00000476391 RPL32P62910 135 aaKnown RBP11.09□□□□□ -0.63
HDAC1-206ENST00000476391 FHL3Q13643 280 aa11.09□□□□□ -0.63
HDAC1-206ENST00000476391 TNFRSF18Q9Y5U5 241 aa11.09□□□□□ -0.63
HDAC1-206ENST00000476391 LOC389332A0A1B0GUA5 103 aa11.08□□□□□ -0.64
HDAC1-206ENST00000476391 MYOD1P15172 320 aa11.08□□□□□ -0.64
HDAC1-206ENST00000476391 C3AR1Q16581 482 aa11.08□□□□□ -0.64
HDAC1-206ENST00000476391 ZNF562Q6V9R5 426 aa11.08□□□□□ -0.64
HDAC1-206ENST00000476391 TEX29Q8N6K0 151 aa11.08□□□□□ -0.64
HDAC1-206ENST00000476391 WI2-2373I1.2A0A1W2PRP0 233 aa11.08□□□□□ -0.64
HDAC1-206ENST00000476391 EVI2AP22794 236 aa11.08□□□□□ -0.64
HDAC1-206ENST00000476391 PCSK5Q92824 1860 aa11.08□□□□□ -0.64
HDAC1-206ENST00000476391 BRWD1Q9NSI6 2320 aa11.07□□□□□ -0.64
HDAC1-206ENST00000476391 A0A1W2PR77 199 aa11.07□□□□□ -0.64
HDAC1-206ENST00000476391 D6R8Y8 96 aa11.07□□□□□ -0.64
HDAC1-206ENST00000476391 MPV17P39210 176 aa11.07□□□□□ -0.64
HDAC1-206ENST00000476391 KLF17Q5JT82 389 aaPredicted RBP11.07□□□□□ -0.64
HDAC1-206ENST00000476391 LINC00305Q7Z4B0 112 aa11.07□□□□□ -0.64
HDAC1-206ENST00000476391 NFE4Q86UQ8 179 aa11.07□□□□□ -0.64
HDAC1-206ENST00000476391 ORMDL3Q8N138 153 aa11.07□□□□□ -0.64
HDAC1-206ENST00000476391 TMEM133Q9H2Q1 129 aa11.07□□□□□ -0.64
HDAC1-206ENST00000476391 MRPS17Q9Y2R5 130 aaKnown RBP11.07□□□□□ -0.64
HDAC1-206ENST00000476391 PRRG2O14669 202 aa11.07□□□□□ -0.64
HDAC1-206ENST00000476391 WNT9BO14905 357 aa11.07□□□□□ -0.64
HDAC1-206ENST00000476391 CLEC3BP05452 202 aa11.07□□□□□ -0.64
HDAC1-206ENST00000476391 CFHR2P36980 270 aa11.07□□□□□ -0.64
HDAC1-206ENST00000476391 Q86TA4 180 aa11.07□□□□□ -0.64
HDAC1-206ENST00000476391 IGHV3-64DA0A0J9YX35 117 aa11.06□□□□□ -0.64
HDAC1-206ENST00000476391 PRSS29PA6NIE9 313 aa11.06□□□□□ -0.64
HDAC1-206ENST00000476391 UPK2O00526 184 aa11.06□□□□□ -0.64
HDAC1-206ENST00000476391 ZNF134P52741 427 aa11.06□□□□□ -0.64
HDAC1-206ENST00000476391 LINC01559Q495D7 138 aa11.06□□□□□ -0.64
HDAC1-206ENST00000476391 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.06□□□□□ -0.64
HDAC1-206ENST00000476391 PPDPFLQ8WWR9 84 aa11.06□□□□□ -0.64
HDAC1-206ENST00000476391 TTTY13Q9BZ97 58 aa11.06□□□□□ -0.64
HDAC1-206ENST00000476391 DYSFO75923 2080 aa11.06□□□□□ -0.64
HDAC1-206ENST00000476391 PPIFP30405 207 aaKnown RBP11.06□□□□□ -0.64
HDAC1-206ENST00000476391 ODF1Q14990 250 aa11.06□□□□□ -0.64
HDAC1-206ENST00000476391 MRPL14Q6P1L8 145 aaKnown RBP11.06□□□□□ -0.64
HDAC1-206ENST00000476391 SMIM20Q8N5G0 67 aa11.06□□□□□ -0.64
HDAC1-206ENST00000476391 IMMP1LQ96LU5 166 aa11.06□□□□□ -0.64
HDAC1-206ENST00000476391 DCTN5Q9BTE1 182 aa11.06□□□□□ -0.64
HDAC1-206ENST00000476391 SPANXA1Q9NS26 97 aa11.06□□□□□ -0.64
HDAC1-206ENST00000476391 KNTC1P50748 2209 aa11.05□□□□□ -0.64
HDAC1-206ENST00000476391 IGHV1-45A0A0A0MS14 117 aa11.05□□□□□ -0.64
HDAC1-206ENST00000476391 CNIH1O95406 144 aa11.05□□□□□ -0.64
HDAC1-206ENST00000476391 SMCPP49901 116 aaPredicted RBP11.05□□□□□ -0.64
HDAC1-206ENST00000476391 LOXL3P58215 753 aa11.05□□□□□ -0.64
HDAC1-206ENST00000476391 CIARTQ8N365 385 aaPredicted RBP11.05□□□□□ -0.64
HDAC1-206ENST00000476391 OR10X1Q8NGY0 326 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms