RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 THYN1Q9P016 225 aa4.69□□□□□ -1.66
ATPAF1-204ENST00000474020 F11RQ9Y624 299 aaKnown RBP4.69□□□□□ -1.66
ATPAF1-204ENST00000474020 MINOS1-NBL1R4GNA1 71 aa4.69□□□□□ -1.66
ATPAF1-204ENST00000474020 PTPN13Q12923 2485 aa4.69□□□□□ -1.66
ATPAF1-204ENST00000474020 IGLC7A0M8Q6 106 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 TIMM23O14925 209 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 GATCO43716 136 aaKnown RBP4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 HLA-DQA1P01909 254 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 REG1AP05451 166 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 CRYGCP07315 174 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 SOD3P08294 240 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 CRISP2P16562 243 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 GATA2P23769 480 aaPredicted RBP4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 PRTN3P24158 256 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 PDLIM4P50479 330 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 PLP1P60201 277 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 RAB4BP61018 213 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 LYZP61626 148 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 PKIAP61925 76 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 PAFAH1B2P68402 229 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 ADORA2A-AS1P86434 159 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 DIAPH2-AS1Q14236 149 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 FAM162BQ5T6X4 162 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 RASL11AQ6T310 242 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 ZNF841Q6ZN19 808 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 BAGE3Q86Y29 109 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 BAGE2Q86Y30 109 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 C5orf17Q8NAS9 161 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 LY6G5BQ8NDX9 201 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 OR4F17Q8NGA8 305 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 OR11H6Q8NGC7 330 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 DAZAP1Q96EP5 407 aaKnown RBP4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 FMC1Q96HJ9 113 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 HIST1H2BLQ99880 126 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 GNB1LQ9BYB4 327 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 FBXL15Q9H469 300 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 GSN-AS1Q9NRJ2 163 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 PIEZO2Q9H5I5 2752 aa4.68□□□□□ -1.66
ATPAF1-204ENST00000474020 DSCAMO60469 2012 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 CADP27708 2225 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 IGKV1OR2-108A0A075B7D4 117 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 PGPEP1LA6NFU8 196 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 SNURFLB1AK76 121 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 GGTLC3B5MD39 225 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 LYNX1G3V0Z9 82 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 GOSR1O95249 250 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 CRYGBP07316 175 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 NBEAP1P0C6P0 100 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 FAM106CPP0CH98 169 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 RD3LP0DJH9 198 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 LYNX1P0DP58 116 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 BRS3P32247 399 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 IER3P46695 156 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 YPEL3P61236 119 aaPredicted RBP4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 RPL15P61313 204 aaKnown RBP4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 ARF6P62330 175 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 DEFA6Q01524 100 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 FXYD3Q14802 87 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 TMEM183BQ1AE95 376 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 FAM231DQ6ZW35 169 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 ZNF329Q86UD4 541 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 DTX2Q86UW9 622 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 NPBQ8NG41 125 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 BLNKQ8WV28 456 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 FXYD5Q96DB9 178 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 GRAMD2BQ96HH9 432 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 TMEM68Q96MH6 324 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 ATG101Q9BSB4 218 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 SAMD10Q9BYL1 202 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 FNDC4Q9H6D8 234 aaPredicted RBP4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 LPAR2Q9HBW0 351 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 OTORQ9NRC9 128 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 TMEM14CQ9P0S9 112 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 NAT8BQ9UHF3 227 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 EPDR1Q9UM22 224 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 HILPDAQ9Y5L2 63 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 SOX21Q9Y651 276 aaPredicted RBP4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 HCFC1P51610 2035 aa4.67□□□□□ -1.66
ATPAF1-204ENST00000474020 TEX15Q9BXT5 2789 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 DOPEY1Q5JWR5 2465 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 MYO9AB2RTY4 2548 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 TRBV20OR9-2A0A075B6H5 130 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 TRAV5A0A0B4J249 113 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 PSMB11A5LHX3 300 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 IZUMO1RA6ND01 250 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 PGPA6NDG6 321 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 NCBP2LA6PVI3 153 aaKnown RBP4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 A8MWL6 223 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 LY6LH3BQJ8 138 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 K7EN84 100 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 SLC17A3O00476 420 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 PHOX2AO14813 284 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 GNG7O60262 68 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 FCN3O75636 299 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 SCGB1D1O95968 90 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 P01737 135 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 AMBPP02760 352 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 PYYP10082 97 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 TMEM11P17152 192 aa4.66□□□□□ -1.66
ATPAF1-204ENST00000474020 CSN1S1P47710 185 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms