RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 IFNA7P01567 189 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 STAG3L3P0CL85 134 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 EDN2P20800 178 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 NPY1RP25929 384 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 FHITP49789 147 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 CEBPGP53567 150 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 MFAP2P55001 183 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 BTN1A1Q13410 526 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 RBMS2Q15434 407 aaKnown RBP4.3□□□□□ -1.72
VARS-222ENST00000470953 ETFRF1Q6IPR1 90 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 COMMD7Q86VX2 200 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 TMEM116Q8NCL8 245 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 DEDD2Q8WXF8 326 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 IL22RA2Q969J5 263 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 SPAG8Q99932 426 aaPredicted RBP4.3□□□□□ -1.72
VARS-222ENST00000470953 RTBDNQ9BSG5 229 aaPredicted RBP4.3□□□□□ -1.72
VARS-222ENST00000470953 SPXQ9BT56 116 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 CHRDL1Q9BU40 450 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 ZNF436Q9C0F3 470 aaPredicted RBP4.3□□□□□ -1.72
VARS-222ENST00000470953 NXF2Q9GZY0 626 aaKnown RBP4.3□□□□□ -1.72
VARS-222ENST00000470953 TMEM231Q9H6L2 316 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 NIT2Q9NQR4 276 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 PRR13Q9NZ81 148 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 FBXL17Q9UF56 701 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 MLXQ9UH92 298 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 GPR132Q9UNW8 380 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 V9GYH0 126 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 IGHV3OR16-13A0A075B7E8 117 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 IGHV3-74A0A0B4J1X5 117 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 A0A0B4J2A0 478 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 A0A0G2JRQ6 117 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 NAP1L6A6NFF2 107 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 IGLL5B9A064 214 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 I3L2K1 104 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 DNASE2O00115 360 aaPredicted RBP4.29□□□□□ -1.72
VARS-222ENST00000470953 SPRY2O43597 315 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 RNASE2P10153 161 aaKnown RBP4.29□□□□□ -1.72
VARS-222ENST00000470953 SLC25A4P12235 298 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 CDKN1BP46527 198 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 TFPI2P48307 235 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 CCR6P51684 374 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 RND2P52198 227 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 NUTF2P61970 127 aaKnown RBP4.29□□□□□ -1.72
VARS-222ENST00000470953 PAFAH1B2P68402 229 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 IFITM3Q01628 133 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 KLF9Q13886 244 aaPredicted RBP4.29□□□□□ -1.72
VARS-222ENST00000470953 KLK9Q2XQG4 91 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 DEFB135Q30KP9 77 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 LGALS9BQ3B8N2 356 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 MRPL52Q86TS9 123 aaKnown RBP4.29□□□□□ -1.72
VARS-222ENST00000470953 SELENOHQ8IZQ5 122 aaKnown RBP4.29□□□□□ -1.72
VARS-222ENST00000470953 OR52E5Q8NH55 327 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 C2CD4CQ8TF44 421 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 GLYATL2Q8WU03 294 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 RAB24Q969Q5 203 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 TMEM230Q96A57 120 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 GPR146Q96CH1 333 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 GALNT14Q96FL9 552 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 ACY3Q96HD9 319 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 GRAMD2BQ96HH9 432 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 SLC35E1Q96K37 410 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 HYLS1Q96M11 299 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 METTL26Q96S19 204 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 PFDN5Q99471 154 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 SLC25A21Q9BQT8 299 aaPredicted RBP4.29□□□□□ -1.72
VARS-222ENST00000470953 CCDC32Q9BV29 185 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 GGTLC1Q9BX51 225 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 UBQLN2Q9UHD9 624 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 SHPKQ9UHJ6 478 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 KLK9Q9UKQ9 250 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 ALG5Q9Y673 324 aa4.29□□□□□ -1.72
VARS-222ENST00000470953 TRAV30A0A087WSZ9 112 aa4.28□□□□□ -1.72
VARS-222ENST00000470953 LOC102724200A0A096LPH7 203 aaPredicted RBP4.28□□□□□ -1.72
VARS-222ENST00000470953 TRAV14DV4A0A0A6YYC5 116 aa4.28□□□□□ -1.72
VARS-222ENST00000470953 IGHV3-66A0A0C4DH42 116 aa4.28□□□□□ -1.72
VARS-222ENST00000470953 IGHV7-4-1A0A0J9YVY3 117 aa4.28□□□□□ -1.72
VARS-222ENST00000470953 SERTM2A0A1B0GWG4 89 aa4.28□□□□□ -1.72
VARS-222ENST00000470953 DUXBA0A1W2PPF3 345 aa4.28□□□□□ -1.72
VARS-222ENST00000470953 A0A1W2PS18 150 aa4.28□□□□□ -1.72
VARS-222ENST00000470953 K7EMT4 169 aa4.28□□□□□ -1.72
VARS-222ENST00000470953 UBE2CO00762 179 aa4.28□□□□□ -1.72
VARS-222ENST00000470953 MED6O75586 246 aa4.28□□□□□ -1.72
VARS-222ENST00000470953 SMR3BP02814 79 aaPredicted RBP4.28□□□□□ -1.72
VARS-222ENST00000470953 CD5P06127 495 aa4.28□□□□□ -1.72
VARS-222ENST00000470953 P0C879 139 aa4.28□□□□□ -1.72
VARS-222ENST00000470953 C4BPBP20851 252 aa4.28□□□□□ -1.72
VARS-222ENST00000470953 FCGR2BP31994 310 aaPredicted RBP4.28□□□□□ -1.72
VARS-222ENST00000470953 ADMP35318 185 aa4.28□□□□□ -1.72
VARS-222ENST00000470953 APOC4P55056 127 aa4.28□□□□□ -1.72
VARS-222ENST00000470953 XGP55808 180 aa4.28□□□□□ -1.72
VARS-222ENST00000470953 RAB11AP62491 216 aa4.28□□□□□ -1.72
VARS-222ENST00000470953 TMEM187Q14656 261 aa4.28□□□□□ -1.72
VARS-222ENST00000470953 ODF1Q14990 250 aa4.28□□□□□ -1.72
VARS-222ENST00000470953 ZNF79Q15937 498 aa4.28□□□□□ -1.72
VARS-222ENST00000470953 TMEM128Q5BJH2 165 aa4.28□□□□□ -1.72
VARS-222ENST00000470953 Q5BKY6 102 aa4.28□□□□□ -1.72
VARS-222ENST00000470953 TCF24Q7RTU0 167 aa4.28□□□□□ -1.72
VARS-222ENST00000470953 CCDC190Q86UF4 302 aa4.28□□□□□ -1.72
VARS-222ENST00000470953 GBGT1Q8N5D6 347 aa4.28□□□□□ -1.72
VARS-222ENST00000470953 C12orf45Q8N5I9 185 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 273.7 ms