RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 FAUP35544 74 aaKnown RBP9.5□□□□□ -0.89
CPSF4-210ENST00000469897 PSMB3P49720 205 aa9.5□□□□□ -0.89
CPSF4-210ENST00000469897 TOMM5Q8N4H5 51 aa9.5□□□□□ -0.89
CPSF4-210ENST00000469897 POM121L12Q8N7R1 296 aa9.5□□□□□ -0.89
CPSF4-210ENST00000469897 NDUFAF3Q9BU61 184 aa9.5□□□□□ -0.89
CPSF4-210ENST00000469897 DUXBA0A1W2PPF3 345 aa9.49□□□□□ -0.89
CPSF4-210ENST00000469897 TMEM189A5PLL7 270 aa9.49□□□□□ -0.89
CPSF4-210ENST00000469897 M0R2N4 97 aa9.49□□□□□ -0.89
CPSF4-210ENST00000469897 WRBO00258 174 aa9.49□□□□□ -0.89
CPSF4-210ENST00000469897 NOL3O60936 208 aaKnown RBP9.49□□□□□ -0.89
CPSF4-210ENST00000469897 AMBPP02760 352 aa9.49□□□□□ -0.89
CPSF4-210ENST00000469897 HOXB5P09067 269 aa9.49□□□□□ -0.89
CPSF4-210ENST00000469897 GATA2P23769 480 aaPredicted RBP9.49□□□□□ -0.89
CPSF4-210ENST00000469897 PSG9Q00887 426 aa9.49□□□□□ -0.89
CPSF4-210ENST00000469897 ZNF79Q15937 498 aa9.49□□□□□ -0.89
CPSF4-210ENST00000469897 FAM78BQ5VT40 261 aa9.49□□□□□ -0.89
CPSF4-210ENST00000469897 EBLN2Q6P2I7 272 aa9.49□□□□□ -0.89
CPSF4-210ENST00000469897 TMEM182Q6ZP80 229 aaPredicted RBP9.49□□□□□ -0.89
CPSF4-210ENST00000469897 C1orf158Q8N1D5 194 aa9.49□□□□□ -0.89
CPSF4-210ENST00000469897 LRTM2Q8N967 370 aa9.49□□□□□ -0.89
CPSF4-210ENST00000469897 ZNF709Q8N972 641 aa9.49□□□□□ -0.89
CPSF4-210ENST00000469897 THAP8Q8NA92 274 aa9.49□□□□□ -0.89
CPSF4-210ENST00000469897 C16orf92Q96LL3 132 aa9.49□□□□□ -0.89
CPSF4-210ENST00000469897 CLUHP3Q96NS8 147 aa9.49□□□□□ -0.89
CPSF4-210ENST00000469897 RSG1Q9BU20 258 aa9.49□□□□□ -0.89
CPSF4-210ENST00000469897 SLC25A22Q9H936 323 aa9.49□□□□□ -0.89
CPSF4-210ENST00000469897 RFNGQ9Y644 331 aa9.49□□□□□ -0.89
CPSF4-210ENST00000469897 PIGBOS1A0A0B4J2F0 54 aa9.48□□□□□ -0.89
CPSF4-210ENST00000469897 ISLRO14498 428 aa9.48□□□□□ -0.89
CPSF4-210ENST00000469897 SYNGR2O43760 224 aa9.48□□□□□ -0.89
CPSF4-210ENST00000469897 MED6O75586 246 aa9.48□□□□□ -0.89
CPSF4-210ENST00000469897 SFT2D2O95562 160 aa9.48□□□□□ -0.89
CPSF4-210ENST00000469897 P0DMU3 169 aa9.48□□□□□ -0.89
CPSF4-210ENST00000469897 FAM231AP0DMU4 169 aa9.48□□□□□ -0.89
CPSF4-210ENST00000469897 FAM231CP0DMU5 169 aa9.48□□□□□ -0.89
CPSF4-210ENST00000469897 SLC25A6P12236 298 aa9.48□□□□□ -0.89
CPSF4-210ENST00000469897 ORM2P19652 201 aa9.48□□□□□ -0.89
CPSF4-210ENST00000469897 AP3S2P59780 193 aa9.48□□□□□ -0.89
CPSF4-210ENST00000469897 RPP30P78346 268 aaKnown RBP9.48□□□□□ -0.89
CPSF4-210ENST00000469897 SPATA31B1PQ5VZV4 182 aa9.48□□□□□ -0.89
CPSF4-210ENST00000469897 GGNBP1Q5YKI7 109 aa9.48□□□□□ -0.89
CPSF4-210ENST00000469897 TRIM63Q969Q1 353 aa9.48□□□□□ -0.89
CPSF4-210ENST00000469897 C20orf173Q96LM9 149 aa9.48□□□□□ -0.89
CPSF4-210ENST00000469897 C17orf77Q96MU5 243 aa9.48□□□□□ -0.89
CPSF4-210ENST00000469897 SLC25A21Q9BQT8 299 aaPredicted RBP9.48□□□□□ -0.89
CPSF4-210ENST00000469897 TMED3Q9Y3Q3 217 aa9.48□□□□□ -0.89
CPSF4-210ENST00000469897 A0A0J9YX75 114 aa9.47□□□□□ -0.89
CPSF4-210ENST00000469897 ZNF98A6NK75 572 aa9.47□□□□□ -0.89
CPSF4-210ENST00000469897 PRSS46E5RG02 174 aa9.47□□□□□ -0.89
CPSF4-210ENST00000469897 CFDP00746 253 aaPredicted RBP9.47□□□□□ -0.89
CPSF4-210ENST00000469897 PPP1R1AQ13522 171 aa9.47□□□□□ -0.89
CPSF4-210ENST00000469897 SPANXN5Q5MJ07 72 aa9.47□□□□□ -0.89
CPSF4-210ENST00000469897 FAM222AQ5U5X8 452 aa9.47□□□□□ -0.89
CPSF4-210ENST00000469897 C7orf50Q9BRJ6 194 aaKnown RBP9.47□□□□□ -0.89
CPSF4-210ENST00000469897 SLC25A32Q9H2D1 315 aa9.47□□□□□ -0.89
CPSF4-210ENST00000469897 RPRMQ9NS64 109 aa9.47□□□□□ -0.89
CPSF4-210ENST00000469897 DKK2Q9UBU2 259 aa9.47□□□□□ -0.89
CPSF4-210ENST00000469897 GOLT1BQ9Y3E0 138 aa9.47□□□□□ -0.89
CPSF4-210ENST00000469897 V9GYH0 126 aa9.47□□□□□ -0.89
CPSF4-210ENST00000469897 HERC2O95714 4834 aa9.46□□□□□ -0.89
CPSF4-210ENST00000469897 IFNA21P01568 189 aa9.46□□□□□ -0.9
CPSF4-210ENST00000469897 HTN3P15516 51 aa9.46□□□□□ -0.9
CPSF4-210ENST00000469897 GALR1P47211 349 aa9.46□□□□□ -0.9
CPSF4-210ENST00000469897 PAX9P55771 341 aa9.46□□□□□ -0.9
CPSF4-210ENST00000469897 IGFL4Q6B9Z1 124 aa9.46□□□□□ -0.9
CPSF4-210ENST00000469897 LINC00336Q6ZUF6 198 aa9.46□□□□□ -0.9
CPSF4-210ENST00000469897 CIB3Q96Q77 187 aaPredicted RBP9.46□□□□□ -0.9
CPSF4-210ENST00000469897 NIPSNAP3BQ9BS92 247 aa9.46□□□□□ -0.9
CPSF4-210ENST00000469897 H3BP45 60 aa9.45□□□□□ -0.9
CPSF4-210ENST00000469897 HBE1P02100 147 aa9.45□□□□□ -0.9
CPSF4-210ENST00000469897 PRM2P04554 102 aa9.45□□□□□ -0.9
CPSF4-210ENST00000469897 MEOX2P50222 304 aa9.45□□□□□ -0.9
CPSF4-210ENST00000469897 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.45□□□□□ -0.9
CPSF4-210ENST00000469897 BPIFCQ8NFQ6 507 aa9.45□□□□□ -0.9
CPSF4-210ENST00000469897 OR1B1Q8NGR6 318 aa9.45□□□□□ -0.9
CPSF4-210ENST00000469897 TMEM147Q9BVK8 224 aa9.45□□□□□ -0.9
CPSF4-210ENST00000469897 DOK5Q9P104 306 aa9.45□□□□□ -0.9
CPSF4-210ENST00000469897 YTHDF2Q9Y5A9 579 aaKnown RBP9.45□□□□□ -0.9
CPSF4-210ENST00000469897 AGRNO00468 2067 aa9.44□□□□□ -0.9
CPSF4-210ENST00000469897 HECTD4Q9Y4D8 3996 aa9.44□□□□□ -0.9
CPSF4-210ENST00000469897 LOC102723971A0A1B0GUV8 181 aa9.44□□□□□ -0.9
CPSF4-210ENST00000469897 ADAP1O75689 374 aa9.44□□□□□ -0.9
CPSF4-210ENST00000469897 S100A5P33763 92 aa9.44□□□□□ -0.9
CPSF4-210ENST00000469897 POLR2GP62487 172 aaKnown RBP eCLIP9.44□□□□□ -0.9
CPSF4-210ENST00000469897 ID3Q02535 119 aa9.44□□□□□ -0.9
CPSF4-210ENST00000469897 FGL1Q08830 312 aa9.44□□□□□ -0.9
CPSF4-210ENST00000469897 RRN3P1Q2M238 152 aa9.44□□□□□ -0.9
CPSF4-210ENST00000469897 SAMD13Q5VXD3 122 aa9.44□□□□□ -0.9
CPSF4-210ENST00000469897 OR4D5Q8NGN0 318 aa9.44□□□□□ -0.9
CPSF4-210ENST00000469897 SLC45A2Q9UMX9 530 aa9.44□□□□□ -0.9
CPSF4-210ENST00000469897 STRAPQ9Y3F4 350 aaKnown RBP9.44□□□□□ -0.9
CPSF4-210ENST00000469897 IGLV2-18A0A075B6J9 118 aa9.43□□□□□ -0.9
CPSF4-210ENST00000469897 TRAV8-2A0A0B4J237 113 aa9.43□□□□□ -0.9
CPSF4-210ENST00000469897 A0A1B0GVY2 172 aa9.43□□□□□ -0.9
CPSF4-210ENST00000469897 SMCO3A2RU48 225 aa9.43□□□□□ -0.9
CPSF4-210ENST00000469897 CCDC160A6NGH7 325 aa9.43□□□□□ -0.9
CPSF4-210ENST00000469897 PRSS29PA6NIE9 313 aa9.43□□□□□ -0.9
CPSF4-210ENST00000469897 RTL8CO15255 209 aa9.43□□□□□ -0.9
CPSF4-210ENST00000469897 AKR1C1Q04828 323 aa9.43□□□□□ -0.9
CPSF4-210ENST00000469897 AMTNQ6UX39 209 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms