RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 SCRT1Q9BWW7 348 aa11.18□□□□□ -0.62
BRAT1-203ENST00000467558 TMEM170AQ8WVE7 144 aa11.17□□□□□ -0.62
BRAT1-203ENST00000467558 PRELID3AQ96N28 172 aa11.17□□□□□ -0.62
BRAT1-203ENST00000467558 NDUFA4L2Q9NRX3 87 aa11.17□□□□□ -0.62
BRAT1-203ENST00000467558 IL15RAQ13261 267 aa11.17□□□□□ -0.62
BRAT1-203ENST00000467558 FAM74A4Q5TZK3 123 aa11.17□□□□□ -0.62
BRAT1-203ENST00000467558 MMP23AO75900 390 aa11.17□□□□□ -0.62
BRAT1-203ENST00000467558 KIR2DL4Q99706 377 aa11.17□□□□□ -0.62
BRAT1-203ENST00000467558 COLCA2A8K830 154 aa11.17□□□□□ -0.62
BRAT1-203ENST00000467558 SCGB1C2P0DMR2 95 aa11.17□□□□□ -0.62
BRAT1-203ENST00000467558 DLX1P56177 255 aa11.17□□□□□ -0.62
BRAT1-203ENST00000467558 MST1LQ2TV78 715 aa11.17□□□□□ -0.62
BRAT1-203ENST00000467558 PRR14LQ5THK1 2151 aa11.16□□□□□ -0.62
BRAT1-203ENST00000467558 PPP1R17O96001 155 aa11.16□□□□□ -0.62
BRAT1-203ENST00000467558 PAX1P15863 534 aa11.16□□□□□ -0.62
BRAT1-203ENST00000467558 JMJD8Q96S16 334 aa11.16□□□□□ -0.62
BRAT1-203ENST00000467558 SHISA9B4DS77 424 aa11.16□□□□□ -0.62
BRAT1-203ENST00000467558 NMUP48645 174 aa11.16□□□□□ -0.62
BRAT1-203ENST00000467558 TRBV7-1A0A0A6YYK4 115 aa11.16□□□□□ -0.62
BRAT1-203ENST00000467558 SRSF9Q13242 221 aaKnown RBP eCLIP11.16□□□□□ -0.62
BRAT1-203ENST00000467558 ZNF56Q15929 161 aa11.16□□□□□ -0.62
BRAT1-203ENST00000467558 SPATA45Q537H7 98 aa11.16□□□□□ -0.62
BRAT1-203ENST00000467558 GATA3P23771 443 aa11.15□□□□□ -0.62
BRAT1-203ENST00000467558 OR4C5Q8NGB2 326 aa11.15□□□□□ -0.62
BRAT1-203ENST00000467558 ALPK3Q96L96 1907 aa11.15□□□□□ -0.62
BRAT1-203ENST00000467558 MUC21A0A0G2JKD1 596 aa11.15□□□□□ -0.62
BRAT1-203ENST00000467558 MUC21A0A140T8X8 626 aa11.15□□□□□ -0.62
BRAT1-203ENST00000467558 MSMBP08118 114 aa11.15□□□□□ -0.62
BRAT1-203ENST00000467558 FOXL1Q12952 345 aa11.15□□□□□ -0.62
BRAT1-203ENST00000467558 MUC21Q5SSG8 566 aa11.15□□□□□ -0.62
BRAT1-203ENST00000467558 TSKUQ8WUA8 353 aa11.15□□□□□ -0.62
BRAT1-203ENST00000467558 DERL1Q9BUN8 251 aa11.15□□□□□ -0.62
BRAT1-203ENST00000467558 LY96Q9Y6Y9 160 aa11.15□□□□□ -0.62
BRAT1-203ENST00000467558 TCRAP04437 139 aa11.15□□□□□ -0.62
BRAT1-203ENST00000467558 RNF224P0DH78 156 aa11.15□□□□□ -0.62
BRAT1-203ENST00000467558 SP5Q6BEB4 398 aaPredicted RBP11.15□□□□□ -0.62
BRAT1-203ENST00000467558 LHFPL4Q7Z7J7 247 aa11.15□□□□□ -0.62
BRAT1-203ENST00000467558 ORMDL3Q8N138 153 aa11.15□□□□□ -0.62
BRAT1-203ENST00000467558 UQCR10Q9UDW1 63 aa11.15□□□□□ -0.62
BRAT1-203ENST00000467558 A6NDN8 102 aa11.15□□□□□ -0.63
BRAT1-203ENST00000467558 SEM1Q6ZVN7 128 aa11.15□□□□□ -0.63
BRAT1-203ENST00000467558 LINC01356Q8N9X3 169 aa11.15□□□□□ -0.63
BRAT1-203ENST00000467558 NCOR2Q9Y618 2525 aa11.14□□□□□ -0.63
BRAT1-203ENST00000467558 HIST1H2BKO60814 126 aa11.14□□□□□ -0.63
BRAT1-203ENST00000467558 HIST1H2BJP06899 126 aa11.14□□□□□ -0.63
BRAT1-203ENST00000467558 HIST1H2BOP23527 126 aa11.14□□□□□ -0.63
BRAT1-203ENST00000467558 HIST1H2BBP33778 126 aa11.14□□□□□ -0.63
BRAT1-203ENST00000467558 HIST1H2BDP58876 126 aa11.14□□□□□ -0.63
BRAT1-203ENST00000467558 HIST1H2BCP62807 126 aa11.14□□□□□ -0.63
BRAT1-203ENST00000467558 HIST2H2BEQ16778 126 aa11.14□□□□□ -0.63
BRAT1-203ENST00000467558 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.14□□□□□ -0.63
BRAT1-203ENST00000467558 TCF23Q7RTU1 214 aa11.14□□□□□ -0.63
BRAT1-203ENST00000467558 HIST1H2BHQ93079 126 aa11.14□□□□□ -0.63
BRAT1-203ENST00000467558 HIST1H2BNQ99877 126 aa11.14□□□□□ -0.63
BRAT1-203ENST00000467558 HIST1H2BMQ99879 126 aa11.14□□□□□ -0.63
BRAT1-203ENST00000467558 CHD9Q3L8U1 2897 aa11.14□□□□□ -0.63
BRAT1-203ENST00000467558 SNCGO76070 127 aa11.14□□□□□ -0.63
BRAT1-203ENST00000467558 POU2AF1Q16633 256 aa11.14□□□□□ -0.63
BRAT1-203ENST00000467558 LBHQ53QV2 105 aaPredicted RBP11.14□□□□□ -0.63
BRAT1-203ENST00000467558 SIGLEC15Q6ZMC9 328 aa11.14□□□□□ -0.63
BRAT1-203ENST00000467558 EXOC3-AS1Q8N2X6 119 aa11.14□□□□□ -0.63
BRAT1-203ENST00000467558 ZNF502Q8TBZ5 544 aa11.14□□□□□ -0.63
BRAT1-203ENST00000467558 USMG5Q96IX5 58 aa11.14□□□□□ -0.63
BRAT1-203ENST00000467558 TMEM70Q9BUB7 260 aa11.14□□□□□ -0.63
BRAT1-203ENST00000467558 LHBP01229 141 aa11.14□□□□□ -0.63
BRAT1-203ENST00000467558 LYRM7Q5U5X0 104 aa11.14□□□□□ -0.63
BRAT1-203ENST00000467558 GNB1LQ9BYB4 327 aa11.14□□□□□ -0.63
BRAT1-203ENST00000467558 IGHV2-70DA0A0C4DH43 119 aa11.13□□□□□ -0.63
BRAT1-203ENST00000467558 RPL15P61313 204 aaKnown RBP11.13□□□□□ -0.63
BRAT1-203ENST00000467558 REC114Q7Z4M0 266 aa11.13□□□□□ -0.63
BRAT1-203ENST00000467558 KIR3DL3Q8N743 410 aa11.13□□□□□ -0.63
BRAT1-203ENST00000467558 ITLN2Q8WWU7 325 aaPredicted RBP11.13□□□□□ -0.63
BRAT1-203ENST00000467558 DMRT1Q9Y5R6 373 aa11.13□□□□□ -0.63
BRAT1-203ENST00000467558 UNC80Q8N2C7 3258 aa11.13□□□□□ -0.63
BRAT1-203ENST00000467558 TOMM40O96008 361 aa11.13□□□□□ -0.63
BRAT1-203ENST00000467558 APOHP02749 345 aaPredicted RBP11.13□□□□□ -0.63
BRAT1-203ENST00000467558 LYPD1Q8N2G4 141 aa11.13□□□□□ -0.63
BRAT1-203ENST00000467558 KCNS1Q96KK3 526 aa11.13□□□□□ -0.63
BRAT1-203ENST00000467558 TRAV21A0A0B4J279 112 aa11.13□□□□□ -0.63
BRAT1-203ENST00000467558 PSMB11A5LHX3 300 aa11.13□□□□□ -0.63
BRAT1-203ENST00000467558 OVOL1O14753 267 aa11.13□□□□□ -0.63
BRAT1-203ENST00000467558 DUSP14O95147 198 aaKnown RBP11.13□□□□□ -0.63
BRAT1-203ENST00000467558 DDTP30046 118 aa11.13□□□□□ -0.63
BRAT1-203ENST00000467558 C1QL4Q86Z23 238 aa11.13□□□□□ -0.63
BRAT1-203ENST00000467558 NUDT10Q8NFP7 164 aa11.13□□□□□ -0.63
BRAT1-203ENST00000467558 NUDT11Q96G61 164 aa11.13□□□□□ -0.63
BRAT1-203ENST00000467558 H7C1H1 209 aa11.12□□□□□ -0.63
BRAT1-203ENST00000467558 GRNP28799 593 aaKnown RBP11.12□□□□□ -0.63
BRAT1-203ENST00000467558 RNASE4P34096 147 aaKnown RBP11.12□□□□□ -0.63
BRAT1-203ENST00000467558 FAM90A2PQ658T7 463 aa11.12□□□□□ -0.63
BRAT1-203ENST00000467558 LDLRAD2Q5SZI1 272 aa11.12□□□□□ -0.63
BRAT1-203ENST00000467558 KLK15Q9H2R5 256 aa11.12□□□□□ -0.63
BRAT1-203ENST00000467558 CXCL1P09341 107 aa11.12□□□□□ -0.63
BRAT1-203ENST00000467558 LOC105371267A0A1B0GV96 52 aa11.12□□□□□ -0.63
BRAT1-203ENST00000467558 OR4C46A6NHA9 309 aa11.12□□□□□ -0.63
BRAT1-203ENST00000467558 CA1P00915 261 aaPredicted RBP11.12□□□□□ -0.63
BRAT1-203ENST00000467558 SOD3P08294 240 aa11.12□□□□□ -0.63
BRAT1-203ENST00000467558 ADCYAP1P18509 176 aa11.12□□□□□ -0.63
BRAT1-203ENST00000467558 PAPPA-AS1Q5QFB9 102 aa11.12□□□□□ -0.63
BRAT1-203ENST00000467558 CYB5R2Q6BCY4 276 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms