RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 SOSTDC1Q6X4U4 206 aa0.71□□□□□ -2.3
SMC4-205ENST00000465563 S100A7AQ86SG5 101 aa0.71□□□□□ -2.3
SMC4-205ENST00000465563 LINC00301Q8NCQ3 95 aa0.71□□□□□ -2.3
SMC4-205ENST00000465563 TEX47Q8TBZ9 253 aa0.71□□□□□ -2.3
SMC4-205ENST00000465563 PATE1Q8WXA2 126 aa0.71□□□□□ -2.3
SMC4-205ENST00000465563 ACER3Q9NUN7 267 aa0.71□□□□□ -2.3
SMC4-205ENST00000465563 ARMC1Q9NVT9 282 aa0.71□□□□□ -2.3
SMC4-205ENST00000465563 ARL2BPQ9Y2Y0 163 aa0.71□□□□□ -2.3
SMC4-205ENST00000465563 PEAK1Q9H792 1746 aa0.7□□□□□ -2.3
SMC4-205ENST00000465563 E9PCH4 1651 aa0.7□□□□□ -2.3
SMC4-205ENST00000465563 M0R378 163 aa0.7□□□□□ -2.3
SMC4-205ENST00000465563 GADD45GO95257 159 aa0.7□□□□□ -2.3
SMC4-205ENST00000465563 DHFRP00374 187 aa0.7□□□□□ -2.3
SMC4-205ENST00000465563 SERPINA1P01009 418 aa0.7□□□□□ -2.3
SMC4-205ENST00000465563 ROMO1P60602 79 aa0.7□□□□□ -2.3
SMC4-205ENST00000465563 RHOBP62745 196 aa0.7□□□□□ -2.3
SMC4-205ENST00000465563 KRR1Q13601 381 aaKnown RBP0.7□□□□□ -2.3
SMC4-205ENST00000465563 C22orf39Q6P5X5 142 aa0.7□□□□□ -2.3
SMC4-205ENST00000465563 PDZD9Q8IXQ8 264 aa0.7□□□□□ -2.3
SMC4-205ENST00000465563 SLC30A7Q8NEW0 376 aa0.7□□□□□ -2.3
SMC4-205ENST00000465563 C9orf16Q9BUW7 83 aa0.7□□□□□ -2.3
SMC4-205ENST00000465563 ENY2Q9NPA8 101 aa0.7□□□□□ -2.3
SMC4-205ENST00000465563 RASL12Q9NYN1 266 aa0.7□□□□□ -2.3
SMC4-205ENST00000465563 FAM32AQ9Y421 112 aaKnown RBP0.7□□□□□ -2.3
SMC4-205ENST00000465563 TET1Q8NFU7 2136 aa0.7□□□□□ -2.3
SMC4-205ENST00000465563 CITO14578 2027 aa0.69□□□□□ -2.3
SMC4-205ENST00000465563 COL1A1P02452 1464 aaPredicted RBP0.69□□□□□ -2.3
SMC4-205ENST00000465563 B4DSR2 109 aa0.69□□□□□ -2.3
SMC4-205ENST00000465563 TAX1BP3O14907 124 aa0.69□□□□□ -2.3
SMC4-205ENST00000465563 SRP14P37108 136 aaKnown RBP0.69□□□□□ -2.3
SMC4-205ENST00000465563 KRTAP26-1Q6PEX3 210 aa0.69□□□□□ -2.3
SMC4-205ENST00000465563 TEX261Q6UWH6 196 aa0.69□□□□□ -2.3
SMC4-205ENST00000465563 C4orf3Q8WVX3 66 aa0.69□□□□□ -2.3
SMC4-205ENST00000465563 CHMP6Q96FZ7 201 aa0.69□□□□□ -2.3
SMC4-205ENST00000465563 IMUPQ9GZP8 106 aa0.69□□□□□ -2.3
SMC4-205ENST00000465563 CDC42SE1Q9NRR8 79 aa0.69□□□□□ -2.3
SMC4-205ENST00000465563 OPTCQ9UBM4 332 aa0.69□□□□□ -2.3
SMC4-205ENST00000465563 U3KQ87 197 aa0.69□□□□□ -2.3
SMC4-205ENST00000465563 FANCMQ8IYD8 2048 aa0.69□□□□□ -2.3
SMC4-205ENST00000465563 ZGRF1Q86YA3 2104 aa0.68□□□□□ -2.3
SMC4-205ENST00000465563 TRGV10A0A0A0MS01 117 aa0.68□□□□□ -2.3
SMC4-205ENST00000465563 CCL16O15467 120 aa0.68□□□□□ -2.3
SMC4-205ENST00000465563 TIMM17BO60830 172 aa0.68□□□□□ -2.3
SMC4-205ENST00000465563 MPV17LQ2QL34 196 aa0.68□□□□□ -2.3
SMC4-205ENST00000465563 DHRS4L2Q6PKH6 230 aa0.68□□□□□ -2.3
SMC4-205ENST00000465563 CLECL1Q8IZS7 167 aa0.68□□□□□ -2.3
SMC4-205ENST00000465563 LINC00467Q9BRT7 94 aa0.68□□□□□ -2.3
SMC4-205ENST00000465563 CCDC160A6NGH7 325 aa0.67□□□□□ -2.3
SMC4-205ENST00000465563 A8MWV9 139 aa0.67□□□□□ -2.3
SMC4-205ENST00000465563 HMGB3O15347 200 aaKnown RBP0.67□□□□□ -2.3
SMC4-205ENST00000465563 IFNA7P01567 189 aa0.67□□□□□ -2.3
SMC4-205ENST00000465563 ZNF25P17030 456 aaPredicted RBP0.67□□□□□ -2.3
SMC4-205ENST00000465563 ARF6P62330 175 aa0.67□□□□□ -2.3
SMC4-205ENST00000465563 TAF1AQ15573 450 aaPredicted RBP0.67□□□□□ -2.3
SMC4-205ENST00000465563 SPRNQ5BIV9 151 aa0.67□□□□□ -2.3
SMC4-205ENST00000465563 EXOC3-AS1Q8N2X6 119 aa0.67□□□□□ -2.3
SMC4-205ENST00000465563 OR10K1Q8NGX5 313 aa0.67□□□□□ -2.3
SMC4-205ENST00000465563 CANT1Q8WVQ1 401 aa0.67□□□□□ -2.3
SMC4-205ENST00000465563 YPEL2Q96QA6 119 aa0.67□□□□□ -2.3
SMC4-205ENST00000465563 GPER1Q99527 375 aa0.67□□□□□ -2.3
SMC4-205ENST00000465563 C6orf62Q9GZU0 229 aaPredicted RBP0.67□□□□□ -2.3
SMC4-205ENST00000465563 ARL5AQ9Y689 179 aa0.67□□□□□ -2.3
SMC4-205ENST00000465563 MIA2Q96PC5 1412 aa0.66□□□□□ -2.3
SMC4-205ENST00000465563 ARHGEF11O15085 1522 aa0.66□□□□□ -2.3
SMC4-205ENST00000465563 TRBV6-4A0A1B0GX49 114 aa0.66□□□□□ -2.3
SMC4-205ENST00000465563 CCL25O15444 150 aa0.66□□□□□ -2.3
SMC4-205ENST00000465563 NDUFB3O43676 98 aa0.66□□□□□ -2.3
SMC4-205ENST00000465563 ATP5HO75947 161 aa0.66□□□□□ -2.3
SMC4-205ENST00000465563 MRPS25P82663 173 aaKnown RBP0.66□□□□□ -2.3
SMC4-205ENST00000465563 MRPS15P82914 257 aaKnown RBP0.66□□□□□ -2.3
SMC4-205ENST00000465563 PATE2Q6UY27 113 aa0.66□□□□□ -2.3
SMC4-205ENST00000465563 PXT1Q8NFP0 134 aa0.66□□□□□ -2.3
SMC4-205ENST00000465563 TEX37Q96LM6 180 aa0.66□□□□□ -2.3
SMC4-205ENST00000465563 SPTBP11277 2137 aa0.65□□□□□ -2.3
SMC4-205ENST00000465563 N4BP2Q86UW6 1770 aaPredicted RBP0.65□□□□□ -2.3
SMC4-205ENST00000465563 TNS3Q68CZ2 1445 aa0.65□□□□□ -2.3
SMC4-205ENST00000465563 TCRBV4S1A1TA0A5B7 111 aa0.65□□□□□ -2.31
SMC4-205ENST00000465563 TMEM256-PLSCR3K7ERE1 68 aa0.65□□□□□ -2.31
SMC4-205ENST00000465563 IGLV1-51P01701 117 aa0.65□□□□□ -2.31
SMC4-205ENST00000465563 NCALDP61601 193 aa0.65□□□□□ -2.31
SMC4-205ENST00000465563 ZNF833PQ6ZTB9 187 aa0.65□□□□□ -2.31
SMC4-205ENST00000465563 OR2T35Q8NGX2 323 aa0.65□□□□□ -2.31
SMC4-205ENST00000465563 TMEM254Q8TBM7 123 aa0.65□□□□□ -2.31
SMC4-205ENST00000465563 SLC25A21Q9BQT8 299 aaPredicted RBP0.65□□□□□ -2.31
SMC4-205ENST00000465563 PRNDQ9UKY0 176 aa0.65□□□□□ -2.31
SMC4-205ENST00000465563 TRPM1Q7Z4N2 1603 aa0.64□□□□□ -2.31
SMC4-205ENST00000465563 PHRF1Q9P1Y6 1649 aaKnown RBP0.64□□□□□ -2.31
SMC4-205ENST00000465563 A0A087WSZ3 146 aa0.64□□□□□ -2.31
SMC4-205ENST00000465563 E7EUB6 86 aa0.64□□□□□ -2.31
SMC4-205ENST00000465563 GGCTO75223 188 aaKnown RBP0.64□□□□□ -2.31
SMC4-205ENST00000465563 DSCR4P56555 118 aaPredicted RBP0.64□□□□□ -2.31
SMC4-205ENST00000465563 UBE2BP63146 152 aa0.64□□□□□ -2.31
SMC4-205ENST00000465563 TMED2Q15363 201 aa0.64□□□□□ -2.31
SMC4-205ENST00000465563 BCL2L15Q5TBC7 163 aa0.64□□□□□ -2.31
SMC4-205ENST00000465563 GRINAQ7Z429 371 aa0.64□□□□□ -2.31
SMC4-205ENST00000465563 Q8N6K4 173 aa0.64□□□□□ -2.31
SMC4-205ENST00000465563 AMELYQ99218 206 aa0.64□□□□□ -2.31
SMC4-205ENST00000465563 PYCARDQ9ULZ3 195 aa0.64□□□□□ -2.31
SMC4-205ENST00000465563 RFX7Q2KHR2 1363 aa0.63□□□□□ -2.31
SMC4-205ENST00000465563 IGHV1-58A0A0C4DH39 117 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms