RNA–Protein interactions for RNA: ENST00000440860.1

LINC00354-202, long intergenic non-protein coding RNA 354, humanhuman

TSL 2 BASIC

Gene LINC00354, Length 376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00354-202ENST00000440860 SIP14410 1827 aa0.41□□□□□ -2.34
LINC00354-202ENST00000440860 PIK3C2GO75747 1445 aa0.41□□□□□ -2.34
LINC00354-202ENST00000440860 A0A087WUJ7 227 aa0.41□□□□□ -2.34
LINC00354-202ENST00000440860 TRAV10A0A0B4J240 114 aa0.41□□□□□ -2.34
LINC00354-202ENST00000440860 KPNA3O00505 521 aaPredicted RBP0.41□□□□□ -2.34
LINC00354-202ENST00000440860 NIPSNAP2O75323 286 aa0.41□□□□□ -2.34
LINC00354-202ENST00000440860 HIST1H3AP68431 136 aa0.41□□□□□ -2.34
LINC00354-202ENST00000440860 H3F3AP84243 136 aa0.41□□□□□ -2.34
LINC00354-202ENST00000440860 PDZD9Q8IXQ8 264 aa0.41□□□□□ -2.34
LINC00354-202ENST00000440860 IFT20Q8IY31 132 aa0.41□□□□□ -2.34
LINC00354-202ENST00000440860 GNPDA2Q8TDQ7 276 aa0.41□□□□□ -2.34
LINC00354-202ENST00000440860 PSMF1Q92530 271 aa0.41□□□□□ -2.34
LINC00354-202ENST00000440860 LINC00052Q96N35 136 aa0.41□□□□□ -2.34
LINC00354-202ENST00000440860 RNASE7Q9H1E1 156 aaKnown RBP0.41□□□□□ -2.34
LINC00354-202ENST00000440860 FAM32AQ9Y421 112 aaKnown RBP0.41□□□□□ -2.34
LINC00354-202ENST00000440860 CITO14578 2027 aa0.41□□□□□ -2.34
LINC00354-202ENST00000440860 FANCMQ8IYD8 2048 aa0.41□□□□□ -2.34
LINC00354-202ENST00000440860 ADCY9O60503 1353 aa0.41□□□□□ -2.34
LINC00354-202ENST00000440860 MYO5AQ9Y4I1 1855 aaKnown RBP0.41□□□□□ -2.34
LINC00354-202ENST00000440860 ZNF462Q96JM2 2506 aa0.4□□□□□ -2.34
LINC00354-202ENST00000440860 NCOA1Q15788 1441 aa0.4□□□□□ -2.34
LINC00354-202ENST00000440860 ZGRF1Q86YA3 2104 aa0.4□□□□□ -2.35
LINC00354-202ENST00000440860 NAV2Q8IVL1 2488 aa0.4□□□□□ -2.35
LINC00354-202ENST00000440860 PLXNA4Q9HCM2 1894 aa0.4□□□□□ -2.35
LINC00354-202ENST00000440860 ERC2-IT1O76042 136 aa0.4□□□□□ -2.35
LINC00354-202ENST00000440860 SERPINB9P50453 376 aa0.4□□□□□ -2.35
LINC00354-202ENST00000440860 PIGPP57054 158 aa0.4□□□□□ -2.35
LINC00354-202ENST00000440860 TMEM97Q5BJF2 176 aa0.4□□□□□ -2.35
LINC00354-202ENST00000440860 LINC00575Q6W349 94 aa0.4□□□□□ -2.35
LINC00354-202ENST00000440860 SIGMAR1Q99720 223 aa0.4□□□□□ -2.35
LINC00354-202ENST00000440860 PARD6GQ9BYG4 376 aaPredicted RBP0.4□□□□□ -2.35
LINC00354-202ENST00000440860 WFDC10AQ9H1F0 79 aa0.4□□□□□ -2.35
LINC00354-202ENST00000440860 UCK1Q9HA47 277 aa0.4□□□□□ -2.35
LINC00354-202ENST00000440860 ARHGEF28Q8N1W1 1705 aaKnown RBP0.4□□□□□ -2.35
LINC00354-202ENST00000440860 SPTBP11277 2137 aa0.4□□□□□ -2.35
LINC00354-202ENST00000440860 ARHGEF11O15085 1522 aa0.39□□□□□ -2.35
LINC00354-202ENST00000440860 NAV3Q8IVL0 2385 aa0.39□□□□□ -2.35
LINC00354-202ENST00000440860 MYLKQ15746 1914 aa0.39□□□□□ -2.35
LINC00354-202ENST00000440860 TRAV23DV6A0A075B6W5 121 aa0.39□□□□□ -2.35
LINC00354-202ENST00000440860 NUPR2A6NF83 97 aa0.39□□□□□ -2.35
LINC00354-202ENST00000440860 A8MWV9 139 aa0.39□□□□□ -2.35
LINC00354-202ENST00000440860 M0R233 179 aa0.39□□□□□ -2.35
LINC00354-202ENST00000440860 HMGB3O15347 200 aaKnown RBP0.39□□□□□ -2.35
LINC00354-202ENST00000440860 NUPR1O60356 82 aa0.39□□□□□ -2.35
LINC00354-202ENST00000440860 BANF1O75531 89 aa0.39□□□□□ -2.35
LINC00354-202ENST00000440860 SRIP30626 198 aa0.39□□□□□ -2.35
LINC00354-202ENST00000440860 CDK6Q00534 326 aa0.39□□□□□ -2.35
LINC00354-202ENST00000440860 LIN52Q52LA3 116 aa0.39□□□□□ -2.35
LINC00354-202ENST00000440860 EIF5AL1Q6IS14 154 aaKnown RBP0.39□□□□□ -2.35
LINC00354-202ENST00000440860 OTUD6BQ8N6M0 293 aa0.39□□□□□ -2.35
LINC00354-202ENST00000440860 OR10K1Q8NGX5 313 aa0.39□□□□□ -2.35
LINC00354-202ENST00000440860 OR10AC1Q8NH08 325 aa0.39□□□□□ -2.35
LINC00354-202ENST00000440860 PBOV1Q9GZY1 135 aa0.39□□□□□ -2.35
LINC00354-202ENST00000440860 NMNAT1Q9HAN9 279 aaPredicted RBP0.39□□□□□ -2.35
LINC00354-202ENST00000440860 ENY2Q9NPA8 101 aa0.39□□□□□ -2.35
LINC00354-202ENST00000440860 OPTCQ9UBM4 332 aa0.39□□□□□ -2.35
LINC00354-202ENST00000440860 CACNA1EQ15878 2313 aa0.39□□□□□ -2.35
LINC00354-202ENST00000440860 COL1A1P02452 1464 aaPredicted RBP0.39□□□□□ -2.35
LINC00354-202ENST00000440860 TMEM114B3SHH9 223 aa0.38□□□□□ -2.35
LINC00354-202ENST00000440860 IFNA7P01567 189 aa0.38□□□□□ -2.35
LINC00354-202ENST00000440860 UBE2BP63146 152 aa0.38□□□□□ -2.35
LINC00354-202ENST00000440860 KRTAP21-1Q3LI58 79 aa0.38□□□□□ -2.35
LINC00354-202ENST00000440860 SPINK9Q5DT21 86 aa0.38□□□□□ -2.35
LINC00354-202ENST00000440860 C22orf39Q6P5X5 142 aa0.38□□□□□ -2.35
LINC00354-202ENST00000440860 Q8IYB0 196 aa0.38□□□□□ -2.35
LINC00354-202ENST00000440860 STAG3L4Q8TBR4 150 aa0.38□□□□□ -2.35
LINC00354-202ENST00000440860 TSKUQ8WUA8 353 aa0.38□□□□□ -2.35
LINC00354-202ENST00000440860 MUCL1Q96DR8 90 aa0.38□□□□□ -2.35
LINC00354-202ENST00000440860 CHCHD2Q9Y6H1 151 aaPredicted RBP0.38□□□□□ -2.35
LINC00354-202ENST00000440860 FMN1Q68DA7 1419 aa0.38□□□□□ -2.35
LINC00354-202ENST00000440860 TET1Q8NFU7 2136 aa0.37□□□□□ -2.35
LINC00354-202ENST00000440860 ZDBF2Q9HCK1 2354 aa0.37□□□□□ -2.35
LINC00354-202ENST00000440860 C17orf112F2Z3M2 114 aa0.37□□□□□ -2.35
LINC00354-202ENST00000440860 M0R378 163 aa0.37□□□□□ -2.35
LINC00354-202ENST00000440860 GGCTO75223 188 aaKnown RBP0.37□□□□□ -2.35
LINC00354-202ENST00000440860 PPYP01298 95 aa0.37□□□□□ -2.35
LINC00354-202ENST00000440860 TCRBP04435 133 aa0.37□□□□□ -2.35
LINC00354-202ENST00000440860 CXCL8P10145 99 aa0.37□□□□□ -2.35
LINC00354-202ENST00000440860 COX7CP15954 63 aa0.37□□□□□ -2.35
LINC00354-202ENST00000440860 RNASE4P34096 147 aaKnown RBP0.37□□□□□ -2.35
LINC00354-202ENST00000440860 CDKN2CP42773 168 aa0.37□□□□□ -2.35
LINC00354-202ENST00000440860 RANP62826 216 aaKnown RBP0.37□□□□□ -2.35
LINC00354-202ENST00000440860 RRN3P1Q2M238 152 aa0.37□□□□□ -2.35
LINC00354-202ENST00000440860 OR4K15Q8NH41 348 aa0.37□□□□□ -2.35
LINC00354-202ENST00000440860 RAB37Q96AX2 223 aa0.37□□□□□ -2.35
LINC00354-202ENST00000440860 ZNF714Q96N38 554 aa0.37□□□□□ -2.35
LINC00354-202ENST00000440860 NPCDR1Q9BY65 106 aa0.37□□□□□ -2.35
LINC00354-202ENST00000440860 IMUPQ9GZP8 106 aa0.37□□□□□ -2.35
LINC00354-202ENST00000440860 C10orf95Q9H7T3 257 aa0.37□□□□□ -2.35
LINC00354-202ENST00000440860 OR52A1Q9UKL2 312 aa0.37□□□□□ -2.35
LINC00354-202ENST00000440860 DOCK4Q8N1I0 1966 aa0.37□□□□□ -2.35
LINC00354-202ENST00000440860 PHRF1Q9P1Y6 1649 aaKnown RBP0.36□□□□□ -2.35
LINC00354-202ENST00000440860 MGAMO43451 1857 aa0.36□□□□□ -2.35
LINC00354-202ENST00000440860 FAM159BA6NKW6 160 aa0.36□□□□□ -2.35
LINC00354-202ENST00000440860 TAX1BP3O14907 124 aa0.36□□□□□ -2.35
LINC00354-202ENST00000440860 OR7C1O76099 320 aaPredicted RBP0.36□□□□□ -2.35
LINC00354-202ENST00000440860 SPINT3P49223 89 aa0.36□□□□□ -2.35
LINC00354-202ENST00000440860 FXYD6P3P58550 94 aa0.36□□□□□ -2.35
LINC00354-202ENST00000440860 TAF1AQ15573 450 aaPredicted RBP0.36□□□□□ -2.35
LINC00354-202ENST00000440860 KRTAP26-1Q6PEX3 210 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms