RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 IGF2BP2-AS1Q96M15 143 aa12.88□□□□□ -0.35
UPK3BP1-201ENST00000428678 DOK5Q9P104 306 aa12.88□□□□□ -0.35
UPK3BP1-201ENST00000428678 CACFD1Q9UGQ2 172 aa12.88□□□□□ -0.35
UPK3BP1-201ENST00000428678 U3KQ87 197 aa12.88□□□□□ -0.35
UPK3BP1-201ENST00000428678 DNAH5Q8TE73 4624 aa12.87□□□□□ -0.35
UPK3BP1-201ENST00000428678 IGKV1D-37A0A075B6S9 117 aa12.87□□□□□ -0.35
UPK3BP1-201ENST00000428678 DEFB130BP0DP73 79 aa12.87□□□□□ -0.35
UPK3BP1-201ENST00000428678 DEFB130AP0DP74 79 aa12.87□□□□□ -0.35
UPK3BP1-201ENST00000428678 OR2F1Q13607 317 aa12.87□□□□□ -0.35
UPK3BP1-201ENST00000428678 SAMD13Q5VXD3 122 aa12.87□□□□□ -0.35
UPK3BP1-201ENST00000428678 Q8N1X5 172 aa12.87□□□□□ -0.35
UPK3BP1-201ENST00000428678 DTD1Q8TEA8 209 aa12.87□□□□□ -0.35
UPK3BP1-201ENST00000428678 C16orf92Q96LL3 132 aa12.87□□□□□ -0.35
UPK3BP1-201ENST00000428678 C20orf173Q96LM9 149 aa12.87□□□□□ -0.35
UPK3BP1-201ENST00000428678 FUNDC2Q9BWH2 189 aa12.87□□□□□ -0.35
UPK3BP1-201ENST00000428678 A0A087WXM4 84 aa12.86□□□□□ -0.35
UPK3BP1-201ENST00000428678 CRYM-AS1A6NIL9 109 aa12.86□□□□□ -0.35
UPK3BP1-201ENST00000428678 LYRM9A8MSI8 78 aa12.86□□□□□ -0.35
UPK3BP1-201ENST00000428678 ZNF705GA8MUZ8 300 aaPredicted RBP12.86□□□□□ -0.35
UPK3BP1-201ENST00000428678 F5H768 121 aa12.86□□□□□ -0.35
UPK3BP1-201ENST00000428678 GABARAPH6UMI1 98 aa12.86□□□□□ -0.35
UPK3BP1-201ENST00000428678 GABARAPO95166 117 aa12.86□□□□□ -0.35
UPK3BP1-201ENST00000428678 PRM2P04554 102 aa12.86□□□□□ -0.35
UPK3BP1-201ENST00000428678 FABP1P07148 127 aa12.86□□□□□ -0.35
UPK3BP1-201ENST00000428678 GAMTQ14353 236 aa12.86□□□□□ -0.35
UPK3BP1-201ENST00000428678 RBKSQ9H477 322 aa12.86□□□□□ -0.35
UPK3BP1-201ENST00000428678 SNRPGP15A8MWD9 76 aa12.85□□□□□ -0.35
UPK3BP1-201ENST00000428678 MEOX2P50222 304 aa12.85□□□□□ -0.35
UPK3BP1-201ENST00000428678 SURF2Q15527 256 aaPredicted RBP12.85□□□□□ -0.35
UPK3BP1-201ENST00000428678 AMTNQ6UX39 209 aa12.85□□□□□ -0.35
UPK3BP1-201ENST00000428678 AP3S1Q92572 193 aa12.85□□□□□ -0.35
UPK3BP1-201ENST00000428678 SCRT2Q9NQ03 307 aa12.85□□□□□ -0.35
UPK3BP1-201ENST00000428678 PRR13Q9NZ81 148 aa12.85□□□□□ -0.35
UPK3BP1-201ENST00000428678 HSPB7Q9UBY9 170 aa12.85□□□□□ -0.35
UPK3BP1-201ENST00000428678 TMEM56-RWDD3S4R434 201 aa12.85□□□□□ -0.35
UPK3BP1-201ENST00000428678 HERC1Q15751 4861 aa12.85□□□□□ -0.35
UPK3BP1-201ENST00000428678 A8MTW9 85 aa12.84□□□□□ -0.35
UPK3BP1-201ENST00000428678 DISC1C4P0D8 188 aa12.84□□□□□ -0.35
UPK3BP1-201ENST00000428678 INSP01308 110 aa12.84□□□□□ -0.35
UPK3BP1-201ENST00000428678 GPX4P36969 197 aaPredicted RBP12.84□□□□□ -0.35
UPK3BP1-201ENST00000428678 GALR1P47211 349 aa12.84□□□□□ -0.35
UPK3BP1-201ENST00000428678 CCL18P55774 89 aa12.84□□□□□ -0.35
UPK3BP1-201ENST00000428678 SPATA12Q7Z6I5 190 aa12.84□□□□□ -0.35
UPK3BP1-201ENST00000428678 C15orf40Q8WUR7 153 aa12.84□□□□□ -0.35
UPK3BP1-201ENST00000428678 M0R2Z0 102 aa12.83□□□□□ -0.36
UPK3BP1-201ENST00000428678 SMCO1Q147U7 214 aa12.83□□□□□ -0.36
UPK3BP1-201ENST00000428678 SPINK13Q1W4C9 94 aa12.83□□□□□ -0.36
UPK3BP1-201ENST00000428678 OR4C16Q8NGL9 310 aa12.83□□□□□ -0.36
UPK3BP1-201ENST00000428678 IL22RA2Q969J5 263 aa12.83□□□□□ -0.36
UPK3BP1-201ENST00000428678 RSG1Q9BU20 258 aa12.83□□□□□ -0.36
UPK3BP1-201ENST00000428678 SLC25A32Q9H2D1 315 aa12.83□□□□□ -0.36
UPK3BP1-201ENST00000428678 SLC25A22Q9H936 323 aa12.83□□□□□ -0.36
UPK3BP1-201ENST00000428678 LINC00588Q9Y4M8 146 aa12.83□□□□□ -0.36
UPK3BP1-201ENST00000428678 DMBT1Q9UGM3 2413 aaPredicted RBP12.82□□□□□ -0.36
UPK3BP1-201ENST00000428678 CCR6P51684 374 aa12.82□□□□□ -0.36
UPK3BP1-201ENST00000428678 CNN1P51911 297 aaKnown RBP12.82□□□□□ -0.36
UPK3BP1-201ENST00000428678 CLINT1Q14677 625 aa12.82□□□□□ -0.36
UPK3BP1-201ENST00000428678 OR11H7Q8NGC8 314 aa12.82□□□□□ -0.36
UPK3BP1-201ENST00000428678 TRGV9Q99603 122 aa12.82□□□□□ -0.36
UPK3BP1-201ENST00000428678 GPR132Q9UNW8 380 aa12.82□□□□□ -0.36
UPK3BP1-201ENST00000428678 DUSP14O95147 198 aaKnown RBP12.81□□□□□ -0.36
UPK3BP1-201ENST00000428678 ATP5G1P05496 136 aa12.81□□□□□ -0.36
UPK3BP1-201ENST00000428678 ATP5G3P48201 142 aa12.81□□□□□ -0.36
UPK3BP1-201ENST00000428678 ATP5IP56385 69 aaPredicted RBP12.81□□□□□ -0.36
UPK3BP1-201ENST00000428678 FCN2Q15485 313 aa12.81□□□□□ -0.36
UPK3BP1-201ENST00000428678 BAP18Q8IXM2 172 aa12.81□□□□□ -0.36
UPK3BP1-201ENST00000428678 KCNIP3Q9Y2W7 256 aa12.81□□□□□ -0.36
UPK3BP1-201ENST00000428678 CRXO43186 299 aaPredicted RBP12.8□□□□□ -0.36
UPK3BP1-201ENST00000428678 ZNF182P17025 639 aaPredicted RBP12.8□□□□□ -0.36
UPK3BP1-201ENST00000428678 TSPOP30536 169 aa12.8□□□□□ -0.36
UPK3BP1-201ENST00000428678 B2MP61769 119 aa12.8□□□□□ -0.36
UPK3BP1-201ENST00000428678 SSBP1Q04837 148 aaKnown RBP12.8□□□□□ -0.36
UPK3BP1-201ENST00000428678 LYZL2Q7Z4W2 148 aa12.8□□□□□ -0.36
UPK3BP1-201ENST00000428678 OR1S1Q8NH92 325 aa12.8□□□□□ -0.36
UPK3BP1-201ENST00000428678 RNF141Q8WVD5 230 aa12.8□□□□□ -0.36
UPK3BP1-201ENST00000428678 PAIP2BQ9ULR5 123 aaKnown RBP12.8□□□□□ -0.36
UPK3BP1-201ENST00000428678 A0A0B4J2A0 478 aa12.79□□□□□ -0.36
UPK3BP1-201ENST00000428678 ZNF98A6NK75 572 aa12.79□□□□□ -0.36
UPK3BP1-201ENST00000428678 AKAIN1P0CW23 69 aa12.79□□□□□ -0.36
UPK3BP1-201ENST00000428678 AZU1P20160 251 aa12.79□□□□□ -0.36
UPK3BP1-201ENST00000428678 IGFL4Q6B9Z1 124 aa12.79□□□□□ -0.36
UPK3BP1-201ENST00000428678 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.79□□□□□ -0.36
UPK3BP1-201ENST00000428678 SSX7Q7RTT5 188 aa12.79□□□□□ -0.36
UPK3BP1-201ENST00000428678 GPR141Q7Z602 305 aa12.79□□□□□ -0.36
UPK3BP1-201ENST00000428678 C17orf77Q96MU5 243 aa12.79□□□□□ -0.36
UPK3BP1-201ENST00000428678 PRRT1Q99946 306 aa12.79□□□□□ -0.36
UPK3BP1-201ENST00000428678 SHPKQ9UHJ6 478 aa12.79□□□□□ -0.36
UPK3BP1-201ENST00000428678 TRAV12-2A0A075B6T6 113 aa12.78□□□□□ -0.36
UPK3BP1-201ENST00000428678 IGKV1OR2-108A0A075B7D4 117 aa12.78□□□□□ -0.36
UPK3BP1-201ENST00000428678 PLAC8L1A1L4L8 177 aa12.78□□□□□ -0.36
UPK3BP1-201ENST00000428678 CBY3A6NI87 242 aa12.78□□□□□ -0.36
UPK3BP1-201ENST00000428678 RAB11AP62491 216 aa12.78□□□□□ -0.36
UPK3BP1-201ENST00000428678 MRPS10P82664 201 aaKnown RBP12.78□□□□□ -0.36
UPK3BP1-201ENST00000428678 GGNBP1Q5YKI7 109 aa12.78□□□□□ -0.36
UPK3BP1-201ENST00000428678 RNF182Q8N6D2 247 aa12.78□□□□□ -0.36
UPK3BP1-201ENST00000428678 THAP8Q8NA92 274 aa12.78□□□□□ -0.36
UPK3BP1-201ENST00000428678 OR51S1Q8NGJ8 323 aa12.78□□□□□ -0.36
UPK3BP1-201ENST00000428678 RGS5O15539 181 aa12.77□□□□□ -0.37
UPK3BP1-201ENST00000428678 CFDP00746 253 aaPredicted RBP12.77□□□□□ -0.37
UPK3BP1-201ENST00000428678 IAPPP10997 89 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms