RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 C3orf36Q3SXR2 165 aa9.89□□□□□ -0.83
UBR4-205ENST00000417040 SPSB3Q6PJ21 355 aa9.89□□□□□ -0.83
UBR4-205ENST00000417040 NRN1LQ496H8 165 aa9.89□□□□□ -0.83
UBR4-205ENST00000417040 C2orf82Q6UX34 121 aa9.89□□□□□ -0.83
UBR4-205ENST00000417040 STHQ8IWL8 128 aa9.89□□□□□ -0.83
UBR4-205ENST00000417040 CLPSP04118 112 aa9.89□□□□□ -0.83
UBR4-205ENST00000417040 PLNP26678 52 aa9.89□□□□□ -0.83
UBR4-205ENST00000417040 SSBP2P81877 361 aaPredicted RBP9.88□□□□□ -0.83
UBR4-205ENST00000417040 PSMG4Q5JS54 123 aa9.88□□□□□ -0.83
UBR4-205ENST00000417040 MRPL14Q6P1L8 145 aaKnown RBP9.88□□□□□ -0.83
UBR4-205ENST00000417040 Q6ZRM9 215 aa9.88□□□□□ -0.83
UBR4-205ENST00000417040 TMEM219Q86XT9 240 aa9.88□□□□□ -0.83
UBR4-205ENST00000417040 FAM90A1Q86YD7 464 aa9.88□□□□□ -0.83
UBR4-205ENST00000417040 C7orf69Q9H7B7 122 aa9.88□□□□□ -0.83
UBR4-205ENST00000417040 MBNL3Q9NUK0 354 aaKnown RBP9.88□□□□□ -0.83
UBR4-205ENST00000417040 SLC50A1Q9BRV3 221 aa9.88□□□□□ -0.83
UBR4-205ENST00000417040 CHAC1Q9BUX1 264 aa9.88□□□□□ -0.83
UBR4-205ENST00000417040 CST9LQ9H4G1 147 aa9.88□□□□□ -0.83
UBR4-205ENST00000417040 TMEM200BQ69YZ2 307 aa9.88□□□□□ -0.83
UBR4-205ENST00000417040 CYYR1Q96J86 154 aa9.88□□□□□ -0.83
UBR4-205ENST00000417040 ZNRD1Q9P1U0 126 aa9.88□□□□□ -0.83
UBR4-205ENST00000417040 IGHV1-46P01743 117 aa9.88□□□□□ -0.83
UBR4-205ENST00000417040 ADARB2-AS1A8MUL3 147 aa9.88□□□□□ -0.83
UBR4-205ENST00000417040 TRAV40A0A0B4J280 105 aa9.87□□□□□ -0.83
UBR4-205ENST00000417040 F2Z2F3 143 aa9.87□□□□□ -0.83
UBR4-205ENST00000417040 CDPF1Q6NVV7 123 aa9.87□□□□□ -0.83
UBR4-205ENST00000417040 ANK1P16157 1881 aa9.87□□□□□ -0.83
UBR4-205ENST00000417040 GGTLC3B5MD39 225 aa9.87□□□□□ -0.83
UBR4-205ENST00000417040 TMEM14EPQ6UXP3 125 aa9.87□□□□□ -0.83
UBR4-205ENST00000417040 GREB1LQ9C091 1923 aaPredicted RBP9.87□□□□□ -0.83
UBR4-205ENST00000417040 IGHV3-53P01767 116 aa9.87□□□□□ -0.83
UBR4-205ENST00000417040 PPBPP02775 128 aa9.87□□□□□ -0.83
UBR4-205ENST00000417040 RPRMLQ8N4K4 120 aa9.87□□□□□ -0.83
UBR4-205ENST00000417040 C1orf162Q8NEQ5 155 aaPredicted RBP9.87□□□□□ -0.83
UBR4-205ENST00000417040 DLX4Q92988 240 aaPredicted RBP9.87□□□□□ -0.83
UBR4-205ENST00000417040 C8orf49Q96NF6 230 aa9.87□□□□□ -0.83
UBR4-205ENST00000417040 HS3ST6Q96QI5 342 aa9.87□□□□□ -0.83
UBR4-205ENST00000417040 THSD7AQ9UPZ6 1657 aa9.87□□□□□ -0.83
UBR4-205ENST00000417040 LYL1P12980 280 aa9.87□□□□□ -0.83
UBR4-205ENST00000417040 CSTL1Q9H114 145 aa9.87□□□□□ -0.83
UBR4-205ENST00000417040 SLC25A20O43772 301 aa9.87□□□□□ -0.83
UBR4-205ENST00000417040 IGHV2-70P01814 119 aa9.87□□□□□ -0.83
UBR4-205ENST00000417040 ZNF562Q6V9R5 426 aa9.87□□□□□ -0.83
UBR4-205ENST00000417040 C14orf178Q8N769 122 aaPredicted RBP9.87□□□□□ -0.83
UBR4-205ENST00000417040 SNRNP200O75643 2136 aaKnown RBP9.87□□□□□ -0.83
UBR4-205ENST00000417040 C15orf62A8K5M9 175 aa9.86□□□□□ -0.83
UBR4-205ENST00000417040 SLC25A48Q6ZT89 311 aaKnown RBP9.86□□□□□ -0.83
UBR4-205ENST00000417040 RALGAPA1Q6GYQ0 2036 aa9.86□□□□□ -0.83
UBR4-205ENST00000417040 GGNQ86UU5 652 aa9.86□□□□□ -0.83
UBR4-205ENST00000417040 ABHD17AQ96GS6 310 aa9.86□□□□□ -0.83
UBR4-205ENST00000417040 A0A087WWL8 130 aa9.86□□□□□ -0.83
UBR4-205ENST00000417040 C9JAW5 83 aa9.86□□□□□ -0.83
UBR4-205ENST00000417040 FAM57AQ8TBR7 257 aa9.86□□□□□ -0.83
UBR4-205ENST00000417040 FAM90A9PA6NNJ1 464 aa9.86□□□□□ -0.83
UBR4-205ENST00000417040 PAX8Q06710 450 aa9.86□□□□□ -0.83
UBR4-205ENST00000417040 FAM166AQ6J272 317 aa9.86□□□□□ -0.83
UBR4-205ENST00000417040 TMEM213A2RRL7 107 aa9.85□□□□□ -0.83
UBR4-205ENST00000417040 CFHR2P36980 270 aa9.85□□□□□ -0.83
UBR4-205ENST00000417040 ZNF876PQ49A33 203 aa9.85□□□□□ -0.83
UBR4-205ENST00000417040 IGHV2-26A0A0B4J1V2 119 aa9.85□□□□□ -0.83
UBR4-205ENST00000417040 ZC2HC1BQ5TFG8 222 aa9.85□□□□□ -0.83
UBR4-205ENST00000417040 PHLDA1Q8WV24 401 aaPredicted RBP9.85□□□□□ -0.83
UBR4-205ENST00000417040 CFHR1Q03591 330 aa9.85□□□□□ -0.83
UBR4-205ENST00000417040 GAGE2AQ6NT46 116 aa9.85□□□□□ -0.83
UBR4-205ENST00000417040 Q6ZWC4 215 aa9.85□□□□□ -0.83
UBR4-205ENST00000417040 FAM168AQ92567 244 aa9.85□□□□□ -0.83
UBR4-205ENST00000417040 TRGV4A0A0C4DH28 118 aa9.85□□□□□ -0.83
UBR4-205ENST00000417040 SPXQ9BT56 116 aa9.85□□□□□ -0.83
UBR4-205ENST00000417040 CASP8AP2Q9UKL3 1982 aa9.84□□□□□ -0.83
UBR4-205ENST00000417040 ZNF415Q09FC8 603 aa9.84□□□□□ -0.83
UBR4-205ENST00000417040 C15orf32Q32M92 178 aa9.84□□□□□ -0.83
UBR4-205ENST00000417040 TSSC4Q9Y5U2 329 aaPredicted RBP9.84□□□□□ -0.83
UBR4-205ENST00000417040 XIRP1Q702N8 1843 aaKnown RBP9.84□□□□□ -0.83
UBR4-205ENST00000417040 CD5LO43866 347 aa9.84□□□□□ -0.83
UBR4-205ENST00000417040 TMEM238C9JI98 176 aa9.84□□□□□ -0.83
UBR4-205ENST00000417040 ARMS2P0C7Q2 107 aa9.84□□□□□ -0.83
UBR4-205ENST00000417040 SRSF7Q16629 238 aaKnown RBP eCLIP9.84□□□□□ -0.83
UBR4-205ENST00000417040 S100A7L2Q5SY68 101 aa9.84□□□□□ -0.83
UBR4-205ENST00000417040 RASL11AQ6T310 242 aa9.84□□□□□ -0.83
UBR4-205ENST00000417040 Q6ZVH6 145 aa9.84□□□□□ -0.83
UBR4-205ENST00000417040 VMO1Q7Z5L0 202 aa9.84□□□□□ -0.83
UBR4-205ENST00000417040 SMPXQ9UHP9 88 aa9.84□□□□□ -0.83
UBR4-205ENST00000417040 Q6P435 159 aa9.84□□□□□ -0.83
UBR4-205ENST00000417040 VDAC2P45880 294 aaPredicted RBP9.83□□□□□ -0.84
UBR4-205ENST00000417040 CHCHD5Q9BSY4 110 aa9.83□□□□□ -0.84
UBR4-205ENST00000417040 MRPL27Q9P0M9 148 aaKnown RBP9.83□□□□□ -0.84
UBR4-205ENST00000417040 MRPS18CQ9Y3D5 142 aaKnown RBP9.83□□□□□ -0.84
UBR4-205ENST00000417040 LTBP4Q8N2S1 1624 aa9.83□□□□□ -0.84
UBR4-205ENST00000417040 IGHV1-3A0A0C4DH29 117 aa9.83□□□□□ -0.84
UBR4-205ENST00000417040 PAX4O43316 350 aa9.83□□□□□ -0.84
UBR4-205ENST00000417040 ZNF726P1Q15940 193 aa9.83□□□□□ -0.84
UBR4-205ENST00000417040 TOMM40O96008 361 aa9.83□□□□□ -0.84
UBR4-205ENST00000417040 RP1P56715 2156 aa9.82□□□□□ -0.84
UBR4-205ENST00000417040 IGLV3-32A0A0A0MS00 114 aa9.82□□□□□ -0.84
UBR4-205ENST00000417040 H0YJW9 148 aa9.82□□□□□ -0.84
UBR4-205ENST00000417040 TCF15Q12870 199 aa9.82□□□□□ -0.84
UBR4-205ENST00000417040 NEU4Q8WWR8 484 aaPredicted RBP9.82□□□□□ -0.84
UBR4-205ENST00000417040 RCHY1Q96PM5 261 aa9.82□□□□□ -0.84
UBR4-205ENST00000417040 CACNA1IQ9P0X4 2223 aa9.82□□□□□ -0.84
UBR4-205ENST00000417040 TRAV26-2A0A0B4J265 109 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms