RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 LRRC28Q86X40 367 aaPredicted RBP2.77□□□□□ -1.97
LSM5-205ENST00000409952 C3orf56Q8N813 242 aa2.77□□□□□ -1.97
LSM5-205ENST00000409952 HS3ST2Q9Y278 367 aa2.77□□□□□ -1.97
LSM5-205ENST00000409952 U3KQ87 197 aa2.77□□□□□ -1.97
LSM5-205ENST00000409952 GLI2P10070 1586 aa2.77□□□□□ -1.97
LSM5-205ENST00000409952 CUX1P39880 1505 aa2.77□□□□□ -1.97
LSM5-205ENST00000409952 RFX7Q2KHR2 1363 aa2.76□□□□□ -1.97
LSM5-205ENST00000409952 LOC107984640A0A0U1RRK4 108 aa2.76□□□□□ -1.97
LSM5-205ENST00000409952 G3V3Q6 166 aa2.76□□□□□ -1.97
LSM5-205ENST00000409952 HIST1H2BKO60814 126 aa2.76□□□□□ -1.97
LSM5-205ENST00000409952 PGLYRP1O75594 196 aaPredicted RBP2.76□□□□□ -1.97
LSM5-205ENST00000409952 HIST1H2BJP06899 126 aa2.76□□□□□ -1.97
LSM5-205ENST00000409952 EVI2AP22794 236 aa2.76□□□□□ -1.97
LSM5-205ENST00000409952 RPL35P42766 123 aaKnown RBP2.76□□□□□ -1.97
LSM5-205ENST00000409952 LINC00315P59091 139 aa2.76□□□□□ -1.97
LSM5-205ENST00000409952 HIST1H1AQ02539 215 aaPredicted RBP2.76□□□□□ -1.97
LSM5-205ENST00000409952 Q5XG85 94 aa2.76□□□□□ -1.97
LSM5-205ENST00000409952 SOSTDC1Q6X4U4 206 aa2.76□□□□□ -1.97
LSM5-205ENST00000409952 OR4E2Q8NGC2 313 aa2.76□□□□□ -1.97
LSM5-205ENST00000409952 NHP2Q9NX24 153 aaKnown RBP2.76□□□□□ -1.97
LSM5-205ENST00000409952 RIC1Q4ADV7 1423 aa2.76□□□□□ -1.97
LSM5-205ENST00000409952 MAP3K4Q9Y6R4 1608 aa2.75□□□□□ -1.97
LSM5-205ENST00000409952 CCDC171Q6TFL3 1326 aa2.75□□□□□ -1.97
LSM5-205ENST00000409952 A0A096LPI6 279 aa2.75□□□□□ -1.97
LSM5-205ENST00000409952 A0A1W2PNM2 257 aa2.75□□□□□ -1.97
LSM5-205ENST00000409952 DYNLT1P63172 113 aa2.75□□□□□ -1.97
LSM5-205ENST00000409952 NDUFA5Q16718 116 aa2.75□□□□□ -1.97
LSM5-205ENST00000409952 DEFB128Q7Z7B8 93 aa2.75□□□□□ -1.97
LSM5-205ENST00000409952 SLC30A7Q8NEW0 376 aa2.75□□□□□ -1.97
LSM5-205ENST00000409952 OR51A4Q8NGJ6 313 aa2.75□□□□□ -1.97
LSM5-205ENST00000409952 CMTM2Q8TAZ6 248 aa2.75□□□□□ -1.97
LSM5-205ENST00000409952 DEDD2Q8WXF8 326 aa2.75□□□□□ -1.97
LSM5-205ENST00000409952 AQP3Q92482 292 aa2.75□□□□□ -1.97
LSM5-205ENST00000409952 ZNF714Q96N38 554 aa2.75□□□□□ -1.97
LSM5-205ENST00000409952 MARCOQ9UEW3 520 aaPredicted RBP2.75□□□□□ -1.97
LSM5-205ENST00000409952 PSORS1C2Q9UIG4 136 aa2.75□□□□□ -1.97
LSM5-205ENST00000409952 A2MP01023 1474 aa2.75□□□□□ -1.97
LSM5-205ENST00000409952 MAGI1Q96QZ7 1491 aaPredicted RBP2.75□□□□□ -1.97
LSM5-205ENST00000409952 ADCY10Q96PN6 1610 aa2.75□□□□□ -1.97
LSM5-205ENST00000409952 MAST2Q6P0Q8 1798 aa2.74□□□□□ -1.97
LSM5-205ENST00000409952 CPS1P31327 1500 aa2.74□□□□□ -1.97
LSM5-205ENST00000409952 ODF3BA8MYP8 253 aa2.74□□□□□ -1.97
LSM5-205ENST00000409952 H3BMG7 143 aa2.74□□□□□ -1.97
LSM5-205ENST00000409952 K7ERJ3 54 aa2.74□□□□□ -1.97
LSM5-205ENST00000409952 SDCBPO00560 298 aaPredicted RBP2.74□□□□□ -1.97
LSM5-205ENST00000409952 RTL8CO15255 209 aa2.74□□□□□ -1.97
LSM5-205ENST00000409952 CLPSP04118 112 aa2.74□□□□□ -1.97
LSM5-205ENST00000409952 IFNA4P05014 189 aa2.74□□□□□ -1.97
LSM5-205ENST00000409952 METTL15P1P0C7V9 234 aa2.74□□□□□ -1.97
LSM5-205ENST00000409952 CRYGAP11844 174 aa2.74□□□□□ -1.97
LSM5-205ENST00000409952 KRTAP13-2Q52LG2 175 aa2.74□□□□□ -1.97
LSM5-205ENST00000409952 LCN15Q6UWW0 184 aa2.74□□□□□ -1.97
LSM5-205ENST00000409952 C4orf22Q6V702 233 aa2.74□□□□□ -1.97
LSM5-205ENST00000409952 WFDC11Q8NEX6 87 aa2.74□□□□□ -1.97
LSM5-205ENST00000409952 TSTD1Q8NFU3 115 aa2.74□□□□□ -1.97
LSM5-205ENST00000409952 OR5D16Q8NGK9 328 aa2.74□□□□□ -1.97
LSM5-205ENST00000409952 MRPS24Q96EL2 167 aaKnown RBP2.74□□□□□ -1.97
LSM5-205ENST00000409952 SMIM3Q9BZL3 60 aa2.74□□□□□ -1.97
LSM5-205ENST00000409952 CBLN4Q9NTU7 201 aa2.74□□□□□ -1.97
LSM5-205ENST00000409952 BAIAP2Q9UQB8 552 aa2.74□□□□□ -1.97
LSM5-205ENST00000409952 IGLV3-9A0A075B6K5 115 aa2.73□□□□□ -1.97
LSM5-205ENST00000409952 TRAV13-1A0A0B4J241 112 aa2.73□□□□□ -1.97
LSM5-205ENST00000409952 OR51F1A6NGY5 319 aa2.73□□□□□ -1.97
LSM5-205ENST00000409952 M0R2Z0 102 aa2.73□□□□□ -1.97
LSM5-205ENST00000409952 MT-ND4LP03901 98 aa2.73□□□□□ -1.97
LSM5-205ENST00000409952 PAEPP09466 180 aa2.73□□□□□ -1.97
LSM5-205ENST00000409952 RPL22P35268 128 aaKnown RBP2.73□□□□□ -1.97
LSM5-205ENST00000409952 AQP4P55087 323 aa2.73□□□□□ -1.97
LSM5-205ENST00000409952 DNAJB13P59910 316 aa2.73□□□□□ -1.97
LSM5-205ENST00000409952 ZNF90Q03938 601 aa2.73□□□□□ -1.97
LSM5-205ENST00000409952 IGFBP7Q16270 282 aa2.73□□□□□ -1.97
LSM5-205ENST00000409952 Q6ZQT0 140 aa2.73□□□□□ -1.97
LSM5-205ENST00000409952 C1orf54Q8WWF1 131 aa2.73□□□□□ -1.97
LSM5-205ENST00000409952 AP1S3Q96PC3 154 aa2.73□□□□□ -1.97
LSM5-205ENST00000409952 BCL2L10Q9HD36 194 aa2.73□□□□□ -1.97
LSM5-205ENST00000409952 CYTL1Q9NRR1 136 aa2.73□□□□□ -1.97
LSM5-205ENST00000409952 KDM5CP41229 1560 aa2.73□□□□□ -1.97
LSM5-205ENST00000409952 TTC37Q6PGP7 1564 aa2.73□□□□□ -1.97
LSM5-205ENST00000409952 ZNF407Q9C0G0 2248 aa2.73□□□□□ -1.97
LSM5-205ENST00000409952 SUPT6HQ7KZ85 1726 aaKnown RBP2.73□□□□□ -1.97
LSM5-205ENST00000409952 CACNA1SQ13698 1873 aa2.73□□□□□ -1.97
LSM5-205ENST00000409952 ZNF106Q9H2Y7 1883 aaKnown RBP2.73□□□□□ -1.97
LSM5-205ENST00000409952 ADGBQ8N7X0 1667 aa2.73□□□□□ -1.97
LSM5-205ENST00000409952 WDR7Q9Y4E6 1490 aa2.72□□□□□ -1.97
LSM5-205ENST00000409952 COL16A1Q07092 1604 aaPredicted RBP2.72□□□□□ -1.97
LSM5-205ENST00000409952 RNF17Q9BXT8 1623 aaKnown RBP2.72□□□□□ -1.97
LSM5-205ENST00000409952 TRBV27A0A0K0K1C4 114 aa2.72□□□□□ -1.97
LSM5-205ENST00000409952 A0A1B0GVG6 124 aa2.72□□□□□ -1.97
LSM5-205ENST00000409952 A8MWV9 139 aa2.72□□□□□ -1.97
LSM5-205ENST00000409952 LY6LH3BQJ8 138 aa2.72□□□□□ -1.97
LSM5-205ENST00000409952 RER1O15258 196 aa2.72□□□□□ -1.97
LSM5-205ENST00000409952 TPST1O60507 370 aa2.72□□□□□ -1.97
LSM5-205ENST00000409952 SHBGP04278 402 aa2.72□□□□□ -1.97
LSM5-205ENST00000409952 KRTAP12-2P59991 146 aa2.72□□□□□ -1.97
LSM5-205ENST00000409952 RELAQ04206 551 aa2.72□□□□□ -1.97
LSM5-205ENST00000409952 PRR9Q5T870 116 aa2.72□□□□□ -1.97
LSM5-205ENST00000409952 TMEM244Q5VVB8 128 aa2.72□□□□□ -1.97
LSM5-205ENST00000409952 PATE2Q6UY27 113 aa2.72□□□□□ -1.97
LSM5-205ENST00000409952 AAED1Q7RTV5 226 aa2.72□□□□□ -1.97
LSM5-205ENST00000409952 TEX29Q8N6K0 151 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms