RNA–Protein interactions for RNA: ENST00000407418.7

CBX6-202, Transcript of chromobox 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBX6, Length 6,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-202ENST00000407418 HGFACQ04756 655 aa13.46□□□□□ -0.25
CBX6-202ENST00000407418 PSG1P11464 419 aa13.46□□□□□ -0.25
CBX6-202ENST00000407418 SUPT4H1P63272 117 aaKnown RBP13.46□□□□□ -0.25
CBX6-202ENST00000407418 IGKV2-40A0A087WW87 121 aaPredicted RBP13.46□□□□□ -0.26
CBX6-202ENST00000407418 TOMM40O96008 361 aa13.46□□□□□ -0.26
CBX6-202ENST00000407418 IGKV2D-40P01614 121 aaPredicted RBP13.46□□□□□ -0.26
CBX6-202ENST00000407418 C1orf122Q6ZSJ8 110 aa13.46□□□□□ -0.26
CBX6-202ENST00000407418 LAMTOR2Q9Y2Q5 125 aa13.46□□□□□ -0.26
CBX6-202ENST00000407418 SRRM4A7MD48 611 aaKnown RBP13.46□□□□□ -0.26
CBX6-202ENST00000407418 TDGF1P3P51864 188 aa13.45□□□□□ -0.26
CBX6-202ENST00000407418 C5orf30Q96GV9 206 aa13.45□□□□□ -0.26
CBX6-202ENST00000407418 PPBPP02775 128 aa13.45□□□□□ -0.26
CBX6-202ENST00000407418 PLA2G5P39877 138 aa13.45□□□□□ -0.26
CBX6-202ENST00000407418 RNF182Q8N6D2 247 aa13.45□□□□□ -0.26
CBX6-202ENST00000407418 HIGD1CA8MV81 97 aa13.45□□□□□ -0.26
CBX6-202ENST00000407418 ZNF138P52744 262 aa13.45□□□□□ -0.26
CBX6-202ENST00000407418 S100A7L2Q5SY68 101 aa13.45□□□□□ -0.26
CBX6-202ENST00000407418 IGHV3-73A0A0B4J1V6 119 aa13.45□□□□□ -0.26
CBX6-202ENST00000407418 IL17RELQ6ZVW7 336 aa13.45□□□□□ -0.26
CBX6-202ENST00000407418 TCF20Q9UGU0 1960 aaKnown RBP13.45□□□□□ -0.26
CBX6-202ENST00000407418 ATRAIDQ6UW56 229 aa13.45□□□□□ -0.26
CBX6-202ENST00000407418 RPRMLQ8N4K4 120 aa13.45□□□□□ -0.26
CBX6-202ENST00000407418 CCL20P78556 96 aa13.44□□□□□ -0.26
CBX6-202ENST00000407418 TRAV9-2A0A087WT02 112 aa13.44□□□□□ -0.26
CBX6-202ENST00000407418 TRAV8-4A0A0B4J246 113 aa13.44□□□□□ -0.26
CBX6-202ENST00000407418 OVOL3O00110 214 aa13.44□□□□□ -0.26
CBX6-202ENST00000407418 DEFB130BP0DP73 79 aa13.44□□□□□ -0.26
CBX6-202ENST00000407418 DEFB130AP0DP74 79 aa13.44□□□□□ -0.26
CBX6-202ENST00000407418 MEGF9Q9H1U4 602 aa13.44□□□□□ -0.26
CBX6-202ENST00000407418 LAIR2Q6ISS4 152 aa13.44□□□□□ -0.26
CBX6-202ENST00000407418 PNRC2Q9NPJ4 139 aaKnown RBP13.44□□□□□ -0.26
CBX6-202ENST00000407418 A0A0A6YYD4 124 aa13.44□□□□□ -0.26
CBX6-202ENST00000407418 PRB1P04280 392 aa13.44□□□□□ -0.26
CBX6-202ENST00000407418 SERF1AO75920 110 aa13.43□□□□□ -0.26
CBX6-202ENST00000407418 IGKV1-27A0A075B6S5 117 aa13.43□□□□□ -0.26
CBX6-202ENST00000407418 DEFB131AP59861 70 aa13.43□□□□□ -0.26
CBX6-202ENST00000407418 TMEM170AQ8WVE7 144 aa13.43□□□□□ -0.26
CBX6-202ENST00000407418 F5H768 121 aa13.43□□□□□ -0.26
CBX6-202ENST00000407418 PPIFP30405 207 aaKnown RBP13.43□□□□□ -0.26
CBX6-202ENST00000407418 Q6P435 159 aa13.43□□□□□ -0.26
CBX6-202ENST00000407418 RMI2Q96E14 147 aa13.43□□□□□ -0.26
CBX6-202ENST00000407418 PMS2P5A8MQ11 134 aa13.43□□□□□ -0.26
CBX6-202ENST00000407418 PRR32B1ATL7 298 aa13.43□□□□□ -0.26
CBX6-202ENST00000407418 SCRT1Q9BWW7 348 aa13.43□□□□□ -0.26
CBX6-202ENST00000407418 BRWD1Q9NSI6 2320 aa13.43□□□□□ -0.26
CBX6-202ENST00000407418 LINC00614P0C842 121 aa13.42□□□□□ -0.26
CBX6-202ENST00000407418 FOXL2NBQ6ZUU3 175 aa13.42□□□□□ -0.26
CBX6-202ENST00000407418 SRSF3P84103 164 aaKnown RBP13.42□□□□□ -0.26
CBX6-202ENST00000407418 MST1LQ2TV78 715 aa13.42□□□□□ -0.26
CBX6-202ENST00000407418 HOXA3O43365 443 aaPredicted RBP13.42□□□□□ -0.26
CBX6-202ENST00000407418 LINC00158P58513 81 aa13.42□□□□□ -0.26
CBX6-202ENST00000407418 KLF17Q5JT82 389 aaPredicted RBP13.42□□□□□ -0.26
CBX6-202ENST00000407418 IGF2-ASQ6U949 168 aa13.42□□□□□ -0.26
CBX6-202ENST00000407418 TRBV6-6A0A0A6YYG2 114 aa13.41□□□□□ -0.26
CBX6-202ENST00000407418 ATP6V0E1O15342 81 aa13.41□□□□□ -0.26
CBX6-202ENST00000407418 SIGMAR1Q99720 223 aa13.41□□□□□ -0.26
CBX6-202ENST00000407418 NDUFAF3Q9BU61 184 aa13.41□□□□□ -0.26
CBX6-202ENST00000407418 SS18Q15532 418 aa13.41□□□□□ -0.26
CBX6-202ENST00000407418 CD55P08174 381 aa13.41□□□□□ -0.26
CBX6-202ENST00000407418 ERCC8Q13216 396 aa13.41□□□□□ -0.26
CBX6-202ENST00000407418 MORN3Q6PF18 240 aaPredicted RBP13.41□□□□□ -0.26
CBX6-202ENST00000407418 RPL23P62829 140 aaKnown RBP13.4□□□□□ -0.26
CBX6-202ENST00000407418 CST9LQ9H4G1 147 aa13.4□□□□□ -0.26
CBX6-202ENST00000407418 TSSC4Q9Y5U2 329 aaPredicted RBP13.4□□□□□ -0.26
CBX6-202ENST00000407418 ANK1P16157 1881 aa13.4□□□□□ -0.26
CBX6-202ENST00000407418 SVILO95425 2214 aa13.4□□□□□ -0.26
CBX6-202ENST00000407418 RNF222A6NCQ9 220 aa13.4□□□□□ -0.26
CBX6-202ENST00000407418 PAX2Q02962 417 aa13.4□□□□□ -0.26
CBX6-202ENST00000407418 NHP2Q9NX24 153 aaKnown RBP13.4□□□□□ -0.26
CBX6-202ENST00000407418 SHISA3A0PJX4 238 aa13.4□□□□□ -0.27
CBX6-202ENST00000407418 NPIPB5A8MRT5 1133 aa13.4□□□□□ -0.27
CBX6-202ENST00000407418 DMRTC2Q8IXT2 367 aaPredicted RBP13.4□□□□□ -0.27
CBX6-202ENST00000407418 COQ2Q96H96 371 aa13.4□□□□□ -0.27
CBX6-202ENST00000407418 WDR83OSQ9Y284 106 aa13.39□□□□□ -0.27
CBX6-202ENST00000407418 CHTOPQ9Y3Y2 248 aaKnown RBP13.39□□□□□ -0.27
CBX6-202ENST00000407418 SCN8AQ9UQD0 1980 aa13.39□□□□□ -0.27
CBX6-202ENST00000407418 CKAP5Q14008 2032 aa13.39□□□□□ -0.27
CBX6-202ENST00000407418 TRAV5A0A0B4J249 113 aa13.39□□□□□ -0.27
CBX6-202ENST00000407418 FAM90A2PQ658T7 463 aa13.39□□□□□ -0.27
CBX6-202ENST00000407418 ZNF562Q6V9R5 426 aa13.39□□□□□ -0.27
CBX6-202ENST00000407418 TANC1Q9C0D5 1861 aa13.39□□□□□ -0.27
CBX6-202ENST00000407418 UBE2CO00762 179 aa13.38□□□□□ -0.27
CBX6-202ENST00000407418 MPZP25189 248 aa13.38□□□□□ -0.27
CBX6-202ENST00000407418 ZNF876PQ49A33 203 aa13.38□□□□□ -0.27
CBX6-202ENST00000407418 MAP1BP46821 2468 aaKnown RBP13.38□□□□□ -0.27
CBX6-202ENST00000407418 J3QRE1 110 aa13.38□□□□□ -0.27
CBX6-202ENST00000407418 RFNGQ9Y644 331 aa13.38□□□□□ -0.27
CBX6-202ENST00000407418 FRMPD3Q5JV73 1810 aa13.38□□□□□ -0.27
CBX6-202ENST00000407418 F8WEM9 126 aa13.38□□□□□ -0.27
CBX6-202ENST00000407418 CGB3P0DN86 165 aa13.38□□□□□ -0.27
CBX6-202ENST00000407418 RNASE7Q9H1E1 156 aaKnown RBP13.38□□□□□ -0.27
CBX6-202ENST00000407418 GFI1BQ5VTD9 330 aa13.38□□□□□ -0.27
CBX6-202ENST00000407418 TREML4Q6UXN2 200 aa13.38□□□□□ -0.27
CBX6-202ENST00000407418 A0A1B0GUS0 222 aa13.38□□□□□ -0.27
CBX6-202ENST00000407418 EVI2AP22794 236 aa13.38□□□□□ -0.27
CBX6-202ENST00000407418 OSTCQ9NRP0 149 aa13.38□□□□□ -0.27
CBX6-202ENST00000407418 ITGB1BP1O14713 200 aa13.37□□□□□ -0.27
CBX6-202ENST00000407418 SFTA2Q6UW10 78 aa13.37□□□□□ -0.27
CBX6-202ENST00000407418 LHFPL4Q7Z7J7 247 aa13.37□□□□□ -0.27
CBX6-202ENST00000407418 PLXNA3P51805 1871 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms