RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 TRAV8-4A0A0B4J246 113 aa11.3□□□□□ -0.6
VAPA-202ENST00000400000 CGB7P0DN87 165 aa11.3□□□□□ -0.6
VAPA-202ENST00000400000 CACNG8Q8WXS5 425 aa11.3□□□□□ -0.6
VAPA-202ENST00000400000 XCL2Q9UBD3 114 aa11.3□□□□□ -0.6
VAPA-202ENST00000400000 ZNF138P52744 262 aa11.3□□□□□ -0.6
VAPA-202ENST00000400000 DOPEY2Q9Y3R5 2298 aa11.3□□□□□ -0.6
VAPA-202ENST00000400000 MBD3L4A6NDZ8 208 aaPredicted RBP11.3□□□□□ -0.6
VAPA-202ENST00000400000 MBD3L3A6NE82 208 aaPredicted RBP11.3□□□□□ -0.6
VAPA-202ENST00000400000 MBD3L5A6NJ08 208 aaPredicted RBP11.3□□□□□ -0.6
VAPA-202ENST00000400000 GGTLC3B5MD39 225 aa11.3□□□□□ -0.6
VAPA-202ENST00000400000 TMEM178BH3BS89 294 aa11.3□□□□□ -0.6
VAPA-202ENST00000400000 M0R2P5 195 aa11.3□□□□□ -0.6
VAPA-202ENST00000400000 DKK1O94907 266 aa11.3□□□□□ -0.6
VAPA-202ENST00000400000 PCP4P48539 62 aa11.3□□□□□ -0.6
VAPA-202ENST00000400000 SSBP2P81877 361 aaPredicted RBP11.3□□□□□ -0.6
VAPA-202ENST00000400000 MBD3L2Q8NHZ7 208 aaPredicted RBP11.3□□□□□ -0.6
VAPA-202ENST00000400000 RNF126Q9BV68 326 aa11.3□□□□□ -0.6
VAPA-202ENST00000400000 PHF3Q92576 2039 aaKnown RBP11.3□□□□□ -0.6
VAPA-202ENST00000400000 ANK1P16157 1881 aa11.3□□□□□ -0.6
VAPA-202ENST00000400000 IGKV1-12A0A0C4DH73 117 aa11.3□□□□□ -0.6
VAPA-202ENST00000400000 IGKV1D-12P01611 117 aa11.3□□□□□ -0.6
VAPA-202ENST00000400000 CLPSL2Q6UWE3 100 aa11.3□□□□□ -0.6
VAPA-202ENST00000400000 NR2C2APQ86WQ0 139 aa11.3□□□□□ -0.6
VAPA-202ENST00000400000 CEP250Q9BV73 2442 aa11.3□□□□□ -0.6
VAPA-202ENST00000400000 TIMP3P35625 211 aa11.29□□□□□ -0.6
VAPA-202ENST00000400000 F5H768 121 aa11.29□□□□□ -0.6
VAPA-202ENST00000400000 PSPNO60542 156 aa11.29□□□□□ -0.6
VAPA-202ENST00000400000 SCN10AQ9Y5Y9 1956 aa11.29□□□□□ -0.6
VAPA-202ENST00000400000 CADP27708 2225 aa11.29□□□□□ -0.6
VAPA-202ENST00000400000 KLK9Q9UKQ9 250 aa11.29□□□□□ -0.6
VAPA-202ENST00000400000 LYZL1Q6UWQ5 148 aa11.29□□□□□ -0.6
VAPA-202ENST00000400000 RNF222A6NCQ9 220 aa11.29□□□□□ -0.6
VAPA-202ENST00000400000 EFNA2O43921 213 aa11.29□□□□□ -0.6
VAPA-202ENST00000400000 FREM3P0C091 2139 aa11.29□□□□□ -0.6
VAPA-202ENST00000400000 RPRMLQ8N4K4 120 aa11.29□□□□□ -0.6
VAPA-202ENST00000400000 TMEM86BQ8N661 226 aa11.29□□□□□ -0.6
VAPA-202ENST00000400000 IGKV1-27A0A075B6S5 117 aa11.29□□□□□ -0.6
VAPA-202ENST00000400000 IGFBPL1Q8WX77 278 aa11.29□□□□□ -0.6
VAPA-202ENST00000400000 A8MXK9 166 aa11.28□□□□□ -0.6
VAPA-202ENST00000400000 B4DSR2 109 aa11.28□□□□□ -0.6
VAPA-202ENST00000400000 TOMM40O96008 361 aa11.28□□□□□ -0.6
VAPA-202ENST00000400000 GGNQ86UU5 652 aa11.28□□□□□ -0.6
VAPA-202ENST00000400000 MST1P26927 711 aa11.28□□□□□ -0.6
VAPA-202ENST00000400000 ASPHD1Q5U4P2 390 aa11.28□□□□□ -0.6
VAPA-202ENST00000400000 ANXA2RQ3ZCQ2 193 aa11.28□□□□□ -0.6
VAPA-202ENST00000400000 C6orf226Q5I0X4 101 aa11.28□□□□□ -0.6
VAPA-202ENST00000400000 CLPSP04118 112 aa11.28□□□□□ -0.6
VAPA-202ENST00000400000 IGFBP3P17936 291 aaPredicted RBP11.28□□□□□ -0.6
VAPA-202ENST00000400000 PRCDQ00LT1 54 aa11.28□□□□□ -0.6
VAPA-202ENST00000400000 SPXQ9BT56 116 aa11.28□□□□□ -0.6
VAPA-202ENST00000400000 J3QW42 95 aa11.27□□□□□ -0.6
VAPA-202ENST00000400000 SAA4P35542 130 aa11.27□□□□□ -0.6
VAPA-202ENST00000400000 ATP5L2Q7Z4Y8 100 aa11.27□□□□□ -0.6
VAPA-202ENST00000400000 SH2D1AO60880 128 aa11.27□□□□□ -0.61
VAPA-202ENST00000400000 DEFB131AP59861 70 aa11.27□□□□□ -0.61
VAPA-202ENST00000400000 SPTA1P02549 2419 aa11.27□□□□□ -0.61
VAPA-202ENST00000400000 IGHV3-38A0A0C4DH36 116 aa11.27□□□□□ -0.61
VAPA-202ENST00000400000 LAGE3Q14657 143 aa11.27□□□□□ -0.61
VAPA-202ENST00000400000 CSTL1Q9H114 145 aa11.27□□□□□ -0.61
VAPA-202ENST00000400000 WNK3Q9BYP7 1800 aa11.27□□□□□ -0.61
VAPA-202ENST00000400000 hDV102S1A0JD36 115 aa11.26□□□□□ -0.61
VAPA-202ENST00000400000 LINC00114Q6XXX2 140 aa11.26□□□□□ -0.61
VAPA-202ENST00000400000 LINC00518Q8N0U6 118 aa11.26□□□□□ -0.61
VAPA-202ENST00000400000 LINC01356Q8N9X3 169 aa11.26□□□□□ -0.61
VAPA-202ENST00000400000 CACNA1BQ00975 2339 aa11.26□□□□□ -0.61
VAPA-202ENST00000400000 FLVCR1-AS1Q8TAF5 88 aa11.26□□□□□ -0.61
VAPA-202ENST00000400000 MGST2Q99735 147 aa11.26□□□□□ -0.61
VAPA-202ENST00000400000 SUMO4Q6EEV6 95 aa11.26□□□□□ -0.61
VAPA-202ENST00000400000 ARFGEF3Q5TH69 2177 aa11.26□□□□□ -0.61
VAPA-202ENST00000400000 HOXD3P31249 432 aaPredicted RBP11.26□□□□□ -0.61
VAPA-202ENST00000400000 OVOL3O00110 214 aa11.25□□□□□ -0.61
VAPA-202ENST00000400000 NTN3O00634 580 aaPredicted RBP11.25□□□□□ -0.61
VAPA-202ENST00000400000 OVOL1O14753 267 aa11.25□□□□□ -0.61
VAPA-202ENST00000400000 EDA2RQ9HAV5 297 aa11.25□□□□□ -0.61
VAPA-202ENST00000400000 IL18BPO95998 194 aa11.25□□□□□ -0.61
VAPA-202ENST00000400000 PLNP26678 52 aa11.25□□□□□ -0.61
VAPA-202ENST00000400000 LCN12Q6JVE5 192 aa11.25□□□□□ -0.61
VAPA-202ENST00000400000 SPSB3Q6PJ21 355 aa11.25□□□□□ -0.61
VAPA-202ENST00000400000 TRAV12-2A0A075B6T6 113 aa11.25□□□□□ -0.61
VAPA-202ENST00000400000 BUB1B-PAK6H3BSN5 160 aa11.25□□□□□ -0.61
VAPA-202ENST00000400000 IGLV3-19P01714 112 aa11.25□□□□□ -0.61
VAPA-202ENST00000400000 DOCK9Q9BZ29 2069 aa11.25□□□□□ -0.61
VAPA-202ENST00000400000 GAGE12JA6NER3 117 aa11.25□□□□□ -0.61
VAPA-202ENST00000400000 GAGE1Q13065 139 aa11.25□□□□□ -0.61
VAPA-202ENST00000400000 GAGE4Q13068 117 aa11.25□□□□□ -0.61
VAPA-202ENST00000400000 GAGE5Q13069 117 aa11.25□□□□□ -0.61
VAPA-202ENST00000400000 GAGE13Q4V321 117 aa11.25□□□□□ -0.61
VAPA-202ENST00000400000 SPINK13Q1W4C9 94 aa11.24□□□□□ -0.61
VAPA-202ENST00000400000 TEX38Q6PEX7 206 aa11.24□□□□□ -0.61
VAPA-202ENST00000400000 ZNF114Q8NC26 417 aa11.24□□□□□ -0.61
VAPA-202ENST00000400000 RPL36AP83881 106 aaKnown RBP11.24□□□□□ -0.61
VAPA-202ENST00000400000 TREML4Q6UXN2 200 aa11.24□□□□□ -0.61
VAPA-202ENST00000400000 RPL36ALQ969Q0 106 aaKnown RBP11.24□□□□□ -0.61
VAPA-202ENST00000400000 IFI27L1Q96BM0 104 aa11.24□□□□□ -0.61
VAPA-202ENST00000400000 TRAV8-3A0A0A6YYJ7 113 aa11.24□□□□□ -0.61
VAPA-202ENST00000400000 IGLV2-23P01705 113 aa11.24□□□□□ -0.61
VAPA-202ENST00000400000 GAFA1Q96PS6 74 aa11.24□□□□□ -0.61
VAPA-202ENST00000400000 MRPS18CQ9Y3D5 142 aaKnown RBP11.24□□□□□ -0.61
VAPA-202ENST00000400000 TRPM7Q96QT4 1865 aa11.24□□□□□ -0.61
VAPA-202ENST00000400000 ATP5IP56385 69 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms