RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 ONECUT1Q9UBC0 465 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 IGKV1OR2-108A0A075B7D4 117 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 A6NDN8 102 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 NUPL2O15504 423 aaKnown RBP4.67□□□□□ -1.66
PTPRD-206ENST00000397617 AAMDCQ9H7C9 122 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 A0A087X0K7 114 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 A0A1W2PRD5 423 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 A0A1W2PRF3 423 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 A0A1W2PRM7 423 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 BMPR1BO00238 502 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 COX7A2P2O60397 106 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 OR2J3O76001 311 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 RPL11P62913 178 aaKnown RBP4.67□□□□□ -1.66
PTPRD-206ENST00000397617 PSG9Q00887 426 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 MIC13Q5XKP0 118 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 BAGE3Q86Y29 109 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 BAGE2Q86Y30 109 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 PMCHL2Q9BQD1 86 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 PAXXQ9BUH6 204 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 PRSS22Q9GZN4 317 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 VCANP13611 3396 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 K7EIM0 57 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 K7EMT4 169 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 GNG4P50150 75 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 PAFAH1B2P68402 229 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 HCP5Q6MZN7 132 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 ERASQ7Z444 233 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 OR4F17Q8NGA8 305 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 ARPC1AQ92747 370 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 TRBV20OR9-2A0A075B6H5 130 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 ZNF98A6NK75 572 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 IGHG2P01859 326 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 OR5AL1P0C617 328 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 KHDC1LQ5JSQ8 128 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 FAM168AQ92567 244 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 VPS25Q9BRG1 176 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 TMEM70Q9BUB7 260 aa4.67□□□□□ -1.66
PTPRD-206ENST00000397617 K7EMI3 77 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 ZNF207O43670 478 aaKnown RBP4.66□□□□□ -1.66
PTPRD-206ENST00000397617 PAGE4O60829 102 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 PPBPP02775 128 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 PRR30Q53SZ7 412 aaPredicted RBP4.66□□□□□ -1.66
PTPRD-206ENST00000397617 NDUFAF3Q9BU61 184 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 TIMM23O14925 209 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 RD3LP0DJH9 198 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 BTF3P20290 206 aaKnown RBP4.66□□□□□ -1.66
PTPRD-206ENST00000397617 AKR1C3P42330 323 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 OR1B1Q8NGR6 318 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 CLUHP3Q96NS8 147 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 IGHV3OR15-7A0A075B7D8 119 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 TRAV2A0A0B4J234 112 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 A0A1W2PS18 150 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 CHEK1O14757 476 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 OR7C2O60412 319 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 ARL14EPLP0DKL9 152 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 RNF125Q96EQ8 232 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 IGKV1D-37A0A075B6S9 117 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 TMEM183AQ8IXX5 376 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 RNF152Q8N8N0 203 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 TMEM37Q8WXS4 190 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 NPIPB3Q92617 1050 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 HIGD1AQ9Y241 93 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 GHRHP01286 108 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 IZUMO4Q1ZYL8 232 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 PIK3CD-AS1Q5SR53 167 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 OR5AU1Q8NGC0 362 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 IL36BQ9NZH7 164 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 RFNGQ9Y644 331 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 LOC105371267A0A1B0GV96 52 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 GP9P14770 177 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 CRISP2P16562 243 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 SPATA31B1PQ5VZV4 182 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 GATD1Q8NB37 220 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 CENPVL3A0A0U1RRI6 287 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 SNRPEP62304 92 aaKnown RBP4.66□□□□□ -1.66
PTPRD-206ENST00000397617 SFRP2Q96HF1 295 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 FZR1Q9UM11 496 aa4.66□□□□□ -1.66
PTPRD-206ENST00000397617 GNG7O60262 68 aa4.65□□□□□ -1.66
PTPRD-206ENST00000397617 CIDEAO60543 219 aa4.65□□□□□ -1.66
PTPRD-206ENST00000397617 PPP1R17O96001 155 aa4.65□□□□□ -1.66
PTPRD-206ENST00000397617 CBLN2Q8IUK8 224 aa4.65□□□□□ -1.66
PTPRD-206ENST00000397617 LINC01560Q8TB33 94 aa4.65□□□□□ -1.66
PTPRD-206ENST00000397617 SCGB1D1O95968 90 aa4.65□□□□□ -1.66
PTPRD-206ENST00000397617 MRGPRG-AS1Q2M3A8 158 aa4.65□□□□□ -1.66
PTPRD-206ENST00000397617 LYPD2Q6UXB3 125 aa4.65□□□□□ -1.66
PTPRD-206ENST00000397617 U3KQE9 123 aa4.65□□□□□ -1.66
PTPRD-206ENST00000397617 CGB1A6NKQ9 187 aa4.65□□□□□ -1.66
PTPRD-206ENST00000397617 KCNS1Q96KK3 526 aa4.65□□□□□ -1.66
PTPRD-206ENST00000397617 PEX7O00628 323 aa4.65□□□□□ -1.67
PTPRD-206ENST00000397617 FCN3O75636 299 aa4.65□□□□□ -1.67
PTPRD-206ENST00000397617 OR2B11Q5JQS5 317 aa4.65□□□□□ -1.67
PTPRD-206ENST00000397617 TMEM75Q8N9X5 138 aa4.65□□□□□ -1.67
PTPRD-206ENST00000397617 OR4C5Q8NGB2 326 aa4.65□□□□□ -1.67
PTPRD-206ENST00000397617 IGHV1-69DA0A0B4J2H0 117 aa4.65□□□□□ -1.67
PTPRD-206ENST00000397617 NPFFO15130 113 aa4.65□□□□□ -1.67
PTPRD-206ENST00000397617 FSHBP01225 129 aa4.65□□□□□ -1.67
PTPRD-206ENST00000397617 IGHV1-69P01742 117 aa4.65□□□□□ -1.67
PTPRD-206ENST00000397617 COL8A2P25067 703 aa4.65□□□□□ -1.67
PTPRD-206ENST00000397617 S100A4P26447 101 aaKnown RBP4.65□□□□□ -1.67
PTPRD-206ENST00000397617 MOB3BQ86TA1 216 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms