RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 DPM3Q9P2X0 92 aa12.37□□□□□ -0.43
CHL1-202ENST00000397491 RBMY1BA6NDE4 496 aaKnown RBP12.36□□□□□ -0.43
CHL1-202ENST00000397491 RBMY1EA6NEQ0 496 aaKnown RBP12.36□□□□□ -0.43
CHL1-202ENST00000397491 TMEM238C9JI98 176 aa12.36□□□□□ -0.43
CHL1-202ENST00000397491 RBMY1DP0C7P1 496 aaKnown RBP12.36□□□□□ -0.43
CHL1-202ENST00000397491 RBMY1A1P0DJD3 496 aaKnown RBP12.36□□□□□ -0.43
CHL1-202ENST00000397491 RBMY1CP0DJD4 496 aa12.36□□□□□ -0.43
CHL1-202ENST00000397491 C10orf55Q5SWW7 151 aa12.36□□□□□ -0.43
CHL1-202ENST00000397491 C9JAW5 83 aa12.36□□□□□ -0.43
CHL1-202ENST00000397491 CCL25O15444 150 aa12.36□□□□□ -0.43
CHL1-202ENST00000397491 CLEC19AQ6UXS0 136 aa12.36□□□□□ -0.43
CHL1-202ENST00000397491 TMEM158Q8WZ71 300 aa12.36□□□□□ -0.43
CHL1-202ENST00000397491 TNFRSF14Q92956 283 aa12.36□□□□□ -0.43
CHL1-202ENST00000397491 NKX2-8O15522 239 aa12.36□□□□□ -0.43
CHL1-202ENST00000397491 GFRA3O60609 400 aa12.36□□□□□ -0.43
CHL1-202ENST00000397491 TMEM101Q96IK0 257 aa12.36□□□□□ -0.43
CHL1-202ENST00000397491 IGKV2-40A0A087WW87 121 aaPredicted RBP12.36□□□□□ -0.43
CHL1-202ENST00000397491 MMP23AO75900 390 aa12.36□□□□□ -0.43
CHL1-202ENST00000397491 IGKV2D-40P01614 121 aaPredicted RBP12.36□□□□□ -0.43
CHL1-202ENST00000397491 TRGV3P03979 118 aa12.36□□□□□ -0.43
CHL1-202ENST00000397491 AMN1Q8IY45 258 aa12.36□□□□□ -0.43
CHL1-202ENST00000397491 SAP25Q8TEE9 199 aa12.36□□□□□ -0.43
CHL1-202ENST00000397491 A0A1W2PR77 199 aa12.35□□□□□ -0.43
CHL1-202ENST00000397491 SMKR1H3BMG3 65 aa12.35□□□□□ -0.43
CHL1-202ENST00000397491 PSPNO60542 156 aa12.35□□□□□ -0.43
CHL1-202ENST00000397491 IGHV1-2P23083 117 aa12.35□□□□□ -0.43
CHL1-202ENST00000397491 SLC50A1Q9BRV3 221 aa12.35□□□□□ -0.43
CHL1-202ENST00000397491 PAX1P15863 534 aa12.35□□□□□ -0.43
CHL1-202ENST00000397491 NPC2P61916 151 aa12.35□□□□□ -0.43
CHL1-202ENST00000397491 PPP1R27Q86WC6 154 aa12.35□□□□□ -0.43
CHL1-202ENST00000397491 DOCK11Q5JSL3 2073 aa12.35□□□□□ -0.43
CHL1-202ENST00000397491 IGLV3-32A0A0A0MS00 114 aa12.35□□□□□ -0.43
CHL1-202ENST00000397491 LINC00473A8K010 186 aa12.35□□□□□ -0.43
CHL1-202ENST00000397491 ZIC4Q8N9L1 334 aa12.35□□□□□ -0.43
CHL1-202ENST00000397491 A0A0G2JMZ2 1700 aa12.35□□□□□ -0.43
CHL1-202ENST00000397491 LRRC37A2A6NM11 1700 aa12.35□□□□□ -0.43
CHL1-202ENST00000397491 LRRC37AA6NMS7 1700 aa12.35□□□□□ -0.43
CHL1-202ENST00000397491 RBBP6Q7Z6E9 1792 aaKnown RBP12.35□□□□□ -0.43
CHL1-202ENST00000397491 TMPRSS3P57727 454 aa12.34□□□□□ -0.43
CHL1-202ENST00000397491 LY6EQ16553 131 aa12.34□□□□□ -0.43
CHL1-202ENST00000397491 BVES-AS1Q5T3Y7 98 aa12.34□□□□□ -0.43
CHL1-202ENST00000397491 GLMPQ8WWB7 406 aa12.34□□□□□ -0.43
CHL1-202ENST00000397491 LIME1Q9H400 295 aa12.34□□□□□ -0.43
CHL1-202ENST00000397491 GREB1LQ9C091 1923 aaPredicted RBP12.34□□□□□ -0.43
CHL1-202ENST00000397491 TRAV21A0A0B4J279 112 aa12.34□□□□□ -0.43
CHL1-202ENST00000397491 KIR2DL5BA0A0G2JN68 375 aa12.34□□□□□ -0.43
CHL1-202ENST00000397491 KIR2DL5BA0A0G2JPC4 375 aa12.34□□□□□ -0.43
CHL1-202ENST00000397491 LINC00205P59089 165 aa12.34□□□□□ -0.43
CHL1-202ENST00000397491 PRSS57Q6UWY2 283 aa12.34□□□□□ -0.43
CHL1-202ENST00000397491 KIR2DL5AQ8N109 375 aa12.34□□□□□ -0.43
CHL1-202ENST00000397491 F8W1H4 67 aa12.34□□□□□ -0.43
CHL1-202ENST00000397491 CD7P09564 240 aa12.34□□□□□ -0.43
CHL1-202ENST00000397491 SLAQ13239 276 aa12.34□□□□□ -0.43
CHL1-202ENST00000397491 DUX5Q96PT3 197 aa12.34□□□□□ -0.43
CHL1-202ENST00000397491 MLNRO43193 412 aa12.34□□□□□ -0.43
CHL1-202ENST00000397491 MYOD1P15172 320 aa12.34□□□□□ -0.43
CHL1-202ENST00000397491 PRB3Q04118 309 aaPredicted RBP12.34□□□□□ -0.43
CHL1-202ENST00000397491 PAX9P55771 341 aa12.34□□□□□ -0.43
CHL1-202ENST00000397491 HIST1H4AP62805 103 aaKnown RBP12.34□□□□□ -0.43
CHL1-202ENST00000397491 CSRP2Q16527 193 aa12.34□□□□□ -0.43
CHL1-202ENST00000397491 ATP1A1-AS1Q5TC04 95 aa12.34□□□□□ -0.43
CHL1-202ENST00000397491 CD28P10747 220 aa12.33□□□□□ -0.44
CHL1-202ENST00000397491 ZNF329Q86UD4 541 aa12.33□□□□□ -0.44
CHL1-202ENST00000397491 SLC25A39Q9BZJ4 359 aaPredicted RBP12.33□□□□□ -0.44
CHL1-202ENST00000397491 COX8AP10176 69 aa12.33□□□□□ -0.44
CHL1-202ENST00000397491 C9orf153Q5TBE3 101 aa12.33□□□□□ -0.44
CHL1-202ENST00000397491 CLEC2AQ6UVW9 174 aa12.33□□□□□ -0.44
CHL1-202ENST00000397491 ZNF114Q8NC26 417 aa12.33□□□□□ -0.44
CHL1-202ENST00000397491 CREBBPQ92793 2442 aa12.33□□□□□ -0.44
CHL1-202ENST00000397491 A0A1W2PPM0 123 aa12.33□□□□□ -0.44
CHL1-202ENST00000397491 GGTLC3B5MD39 225 aa12.33□□□□□ -0.44
CHL1-202ENST00000397491 PATJQ8NI35 1801 aa12.33□□□□□ -0.44
CHL1-202ENST00000397491 LRRK1Q38SD2 2015 aa12.33□□□□□ -0.44
CHL1-202ENST00000397491 TRAV40A0A0B4J280 105 aa12.33□□□□□ -0.44
CHL1-202ENST00000397491 Q6ZS49 121 aa12.33□□□□□ -0.44
CHL1-202ENST00000397491 RNASE8Q8TDE3 154 aaKnown RBP12.33□□□□□ -0.44
CHL1-202ENST00000397491 MED12Q93074 2177 aa12.32□□□□□ -0.44
CHL1-202ENST00000397491 PARP14Q460N5 1801 aa12.32□□□□□ -0.44
CHL1-202ENST00000397491 CD24P25063 80 aa12.32□□□□□ -0.44
CHL1-202ENST00000397491 DEFB104AQ8WTQ1 72 aa12.32□□□□□ -0.44
CHL1-202ENST00000397491 IMMP1LQ96LU5 166 aa12.32□□□□□ -0.44
CHL1-202ENST00000397491 SPANXA1Q9NS26 97 aa12.32□□□□□ -0.44
CHL1-202ENST00000397491 PDCD11Q14690 1871 aaKnown RBP12.32□□□□□ -0.44
CHL1-202ENST00000397491 TMEM42Q69YG0 159 aa12.32□□□□□ -0.44
CHL1-202ENST00000397491 ZNF562Q6V9R5 426 aa12.32□□□□□ -0.44
CHL1-202ENST00000397491 RNF115Q9Y4L5 304 aa12.32□□□□□ -0.44
CHL1-202ENST00000397491 DIDO1Q9BTC0 2240 aaKnown RBP12.32□□□□□ -0.44
CHL1-202ENST00000397491 GREB1Q4ZG55 1949 aa12.32□□□□□ -0.44
CHL1-202ENST00000397491 TRBV6-6A0A0A6YYG2 114 aa12.32□□□□□ -0.44
CHL1-202ENST00000397491 SH2D1AO60880 128 aa12.32□□□□□ -0.44
CHL1-202ENST00000397491 EFEMP2O95967 443 aa12.32□□□□□ -0.44
CHL1-202ENST00000397491 ARMS2P0C7Q2 107 aa12.32□□□□□ -0.44
CHL1-202ENST00000397491 NRXN2Q9P2S2 1712 aa12.32□□□□□ -0.44
CHL1-202ENST00000397491 CCL21O00585 134 aa12.31□□□□□ -0.44
CHL1-202ENST00000397491 TOMM40O96008 361 aa12.31□□□□□ -0.44
CHL1-202ENST00000397491 ASCL4Q6XD76 172 aa12.31□□□□□ -0.44
CHL1-202ENST00000397491 C20orf204Q6ZNR8 217 aa12.31□□□□□ -0.44
CHL1-202ENST00000397491 PRR7Q8TB68 274 aa12.31□□□□□ -0.44
CHL1-202ENST00000397491 V9GYV3 84 aa12.31□□□□□ -0.44
CHL1-202ENST00000397491 ABCA4P78363 2273 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms