RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 GNG3P63215 75 aa12.18□□□□□ -0.46
VLDLR-202ENST00000382099 C12orf74Q32Q52 190 aa12.18□□□□□ -0.46
VLDLR-202ENST00000382099 GTSCR1Q86UQ5 136 aa12.18□□□□□ -0.46
VLDLR-202ENST00000382099 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.18□□□□□ -0.46
VLDLR-202ENST00000382099 IFI27L1Q96BM0 104 aa12.18□□□□□ -0.46
VLDLR-202ENST00000382099 PAXXQ9BUH6 204 aa12.18□□□□□ -0.46
VLDLR-202ENST00000382099 COL5A1P20908 1838 aaPredicted RBP12.18□□□□□ -0.46
VLDLR-202ENST00000382099 CT45A10P0DMU9 189 aa12.17□□□□□ -0.46
VLDLR-202ENST00000382099 PSMB2P49721 201 aa12.17□□□□□ -0.46
VLDLR-202ENST00000382099 SLC25A53Q5H9E4 307 aa12.17□□□□□ -0.46
VLDLR-202ENST00000382099 ZNF562Q6V9R5 426 aa12.17□□□□□ -0.46
VLDLR-202ENST00000382099 NFE4Q86UQ8 179 aa12.17□□□□□ -0.46
VLDLR-202ENST00000382099 OR9G1Q8NH87 305 aa12.17□□□□□ -0.46
VLDLR-202ENST00000382099 PHLDA1Q8WV24 401 aaPredicted RBP12.17□□□□□ -0.46
VLDLR-202ENST00000382099 TGFAP01135 160 aa12.17□□□□□ -0.46
VLDLR-202ENST00000382099 TFF1P04155 84 aa12.17□□□□□ -0.46
VLDLR-202ENST00000382099 PF4V1P10720 104 aa12.17□□□□□ -0.46
VLDLR-202ENST00000382099 SLC25A33Q9BSK2 321 aa12.17□□□□□ -0.46
VLDLR-202ENST00000382099 ATMQ13315 3056 aa12.17□□□□□ -0.46
VLDLR-202ENST00000382099 PRSS46E5RG02 174 aa12.16□□□□□ -0.46
VLDLR-202ENST00000382099 M0QXV9 152 aa12.16□□□□□ -0.46
VLDLR-202ENST00000382099 LINC00596Q86U02 117 aa12.16□□□□□ -0.46
VLDLR-202ENST00000382099 RPRMLQ8N4K4 120 aa12.16□□□□□ -0.46
VLDLR-202ENST00000382099 PPP1R35Q8TAP8 253 aa12.16□□□□□ -0.46
VLDLR-202ENST00000382099 TRBV25-1A0A075B6N4 114 aa12.16□□□□□ -0.46
VLDLR-202ENST00000382099 PGPA6NDG6 321 aa12.16□□□□□ -0.46
VLDLR-202ENST00000382099 C16orf97H3BN30 126 aa12.16□□□□□ -0.46
VLDLR-202ENST00000382099 GAGE2BQ13066 116 aa12.16□□□□□ -0.46
VLDLR-202ENST00000382099 GAGE2EQ4V326 116 aa12.16□□□□□ -0.46
VLDLR-202ENST00000382099 FLYWCH2Q96CP2 140 aaKnown RBP12.16□□□□□ -0.46
VLDLR-202ENST00000382099 GAGE2DQ9UEU5 116 aa12.16□□□□□ -0.46
VLDLR-202ENST00000382099 AGRNO00468 2067 aa12.16□□□□□ -0.46
VLDLR-202ENST00000382099 NCKAP5O14513 1909 aa12.16□□□□□ -0.46
VLDLR-202ENST00000382099 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.16□□□□□ -0.46
VLDLR-202ENST00000382099 A0A0J9YW62 118 aa12.16□□□□□ -0.46
VLDLR-202ENST00000382099 MOSP00540 346 aa12.16□□□□□ -0.46
VLDLR-202ENST00000382099 PRSS1P07477 247 aa12.16□□□□□ -0.46
VLDLR-202ENST00000382099 Q6P435 159 aa12.16□□□□□ -0.46
VLDLR-202ENST00000382099 COX7A2P2O60397 106 aa12.15□□□□□ -0.46
VLDLR-202ENST00000382099 DSCR4P56555 118 aaPredicted RBP12.15□□□□□ -0.46
VLDLR-202ENST00000382099 ZNF329Q86UD4 541 aa12.15□□□□□ -0.46
VLDLR-202ENST00000382099 SRXN1Q9BYN0 137 aa12.15□□□□□ -0.46
VLDLR-202ENST00000382099 FABP5P3A8MUU1 101 aa12.15□□□□□ -0.46
VLDLR-202ENST00000382099 TNFRSF13BO14836 293 aaPredicted RBP12.15□□□□□ -0.46
VLDLR-202ENST00000382099 HOXA4Q00056 320 aaPredicted RBP12.15□□□□□ -0.46
VLDLR-202ENST00000382099 PPDPFQ9H3Y8 114 aa12.15□□□□□ -0.46
VLDLR-202ENST00000382099 FER1L5A0AVI2 2057 aa12.15□□□□□ -0.46
VLDLR-202ENST00000382099 ICE1Q9Y2F5 2266 aa12.15□□□□□ -0.47
VLDLR-202ENST00000382099 TNCP24821 2201 aa12.15□□□□□ -0.47
VLDLR-202ENST00000382099 IGHV3-48P01763 117 aa12.15□□□□□ -0.47
VLDLR-202ENST00000382099 GRPP07492 148 aa12.15□□□□□ -0.47
VLDLR-202ENST00000382099 FADS6Q8N9I5 356 aa12.15□□□□□ -0.47
VLDLR-202ENST00000382099 PRO0461Q9UI25 63 aa12.15□□□□□ -0.47
VLDLR-202ENST00000382099 DOCK10Q96BY6 2186 aa12.14□□□□□ -0.47
VLDLR-202ENST00000382099 FOXF2Q12947 444 aa12.14□□□□□ -0.47
VLDLR-202ENST00000382099 GNG12Q9UBI6 72 aa12.14□□□□□ -0.47
VLDLR-202ENST00000382099 SOX21Q9Y651 276 aaPredicted RBP12.14□□□□□ -0.47
VLDLR-202ENST00000382099 HCFC1P51610 2035 aa12.14□□□□□ -0.47
VLDLR-202ENST00000382099 TMEM30CPA0ZSE6 113 aa12.14□□□□□ -0.47
VLDLR-202ENST00000382099 ARMS2P0C7Q2 107 aa12.14□□□□□ -0.47
VLDLR-202ENST00000382099 DEFB126Q9BYW3 111 aa12.14□□□□□ -0.47
VLDLR-202ENST00000382099 CELA2AP08217 269 aa12.13□□□□□ -0.47
VLDLR-202ENST00000382099 RRN3P1Q2M238 152 aa12.13□□□□□ -0.47
VLDLR-202ENST00000382099 ROS1P08922 2347 aa12.13□□□□□ -0.47
VLDLR-202ENST00000382099 IGKV1OR2-108A0A075B7D4 117 aa12.13□□□□□ -0.47
VLDLR-202ENST00000382099 MRPS21P82921 87 aaKnown RBP12.13□□□□□ -0.47
VLDLR-202ENST00000382099 CFHR1Q03591 330 aa12.13□□□□□ -0.47
VLDLR-202ENST00000382099 DIAPH2-AS1Q14236 149 aa12.13□□□□□ -0.47
VLDLR-202ENST00000382099 LPAL2Q16609 132 aa12.13□□□□□ -0.47
VLDLR-202ENST00000382099 CXorf67Q86X51 503 aaPredicted RBP12.13□□□□□ -0.47
VLDLR-202ENST00000382099 SNCGO76070 127 aa12.13□□□□□ -0.47
VLDLR-202ENST00000382099 NHLRC4P0CG21 123 aaPredicted RBP12.13□□□□□ -0.47
VLDLR-202ENST00000382099 EDDM3AQ14507 147 aa12.13□□□□□ -0.47
VLDLR-202ENST00000382099 SRSF12Q8WXF0 261 aaKnown RBP12.13□□□□□ -0.47
VLDLR-202ENST00000382099 S1PR3Q99500 378 aa12.13□□□□□ -0.47
VLDLR-202ENST00000382099 PRDM14Q9GZV8 571 aa12.13□□□□□ -0.47
VLDLR-202ENST00000382099 TNRC18O15417 2968 aaPredicted RBP12.12□□□□□ -0.47
VLDLR-202ENST00000382099 RIF1Q5UIP0 2472 aaKnown RBP12.12□□□□□ -0.47
VLDLR-202ENST00000382099 A0A1B0GUT8 65 aa12.12□□□□□ -0.47
VLDLR-202ENST00000382099 A0A1W2PPC4 97 aa12.12□□□□□ -0.47
VLDLR-202ENST00000382099 CXCL13O43927 109 aa12.12□□□□□ -0.47
VLDLR-202ENST00000382099 HBDP02042 147 aa12.12□□□□□ -0.47
VLDLR-202ENST00000382099 SP1P08047 785 aa12.12□□□□□ -0.47
VLDLR-202ENST00000382099 PDPNQ86YL7 162 aa12.12□□□□□ -0.47
VLDLR-202ENST00000382099 SLC25A2Q9BXI2 301 aa12.12□□□□□ -0.47
VLDLR-202ENST00000382099 PRR14LQ5THK1 2151 aa12.12□□□□□ -0.47
VLDLR-202ENST00000382099 ABCA1O95477 2261 aa12.12□□□□□ -0.47
VLDLR-202ENST00000382099 D6R8Y8 96 aa12.12□□□□□ -0.47
VLDLR-202ENST00000382099 PSPNO60542 156 aa12.12□□□□□ -0.47
VLDLR-202ENST00000382099 ZFAND5O76080 213 aa12.12□□□□□ -0.47
VLDLR-202ENST00000382099 RBP4P02753 201 aa12.12□□□□□ -0.47
VLDLR-202ENST00000382099 RPL39P5Q59GN2 51 aa12.12□□□□□ -0.47
VLDLR-202ENST00000382099 FAM159AQ6UWV7 190 aa12.12□□□□□ -0.47
VLDLR-202ENST00000382099 C1orf210Q8IVY1 113 aa12.12□□□□□ -0.47
VLDLR-202ENST00000382099 ASCL2Q99929 193 aa12.12□□□□□ -0.47
VLDLR-202ENST00000382099 INTS1Q8N201 2190 aaKnown RBP12.11□□□□□ -0.47
VLDLR-202ENST00000382099 NDUFV3P56181 108 aaKnown RBP12.11□□□□□ -0.47
VLDLR-202ENST00000382099 RAX2Q96IS3 184 aa12.11□□□□□ -0.47
VLDLR-202ENST00000382099 DCTN5Q9BTE1 182 aa12.11□□□□□ -0.47
VLDLR-202ENST00000382099 EPDR1Q9UM22 224 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms