RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 OR4B1Q8NGF8 309 aa12.06□□□□□ -0.48
SMN2-201ENST00000380741 DUXBA0A1W2PPF3 345 aa12.05□□□□□ -0.48
SMN2-201ENST00000380741 SMIM9A6NGZ8 99 aa12.05□□□□□ -0.48
SMN2-201ENST00000380741 F6UB75 175 aa12.05□□□□□ -0.48
SMN2-201ENST00000380741 H3BMQ9 156 aa12.05□□□□□ -0.48
SMN2-201ENST00000380741 SPART-AS1P0CW21 52 aa12.05□□□□□ -0.48
SMN2-201ENST00000380741 P0DMU3 169 aa12.05□□□□□ -0.48
SMN2-201ENST00000380741 FAM231AP0DMU4 169 aa12.05□□□□□ -0.48
SMN2-201ENST00000380741 FAM231CP0DMU5 169 aa12.05□□□□□ -0.48
SMN2-201ENST00000380741 RAB11AP62491 216 aa12.05□□□□□ -0.48
SMN2-201ENST00000380741 PPP1R14BQ96C90 147 aa12.05□□□□□ -0.48
SMN2-201ENST00000380741 CLUHP3Q96NS8 147 aa12.05□□□□□ -0.48
SMN2-201ENST00000380741 TRGV9Q99603 122 aa12.05□□□□□ -0.48
SMN2-201ENST00000380741 SLC35B3Q9H1N7 401 aa12.05□□□□□ -0.48
SMN2-201ENST00000380741 PAIP2BQ9ULR5 123 aaKnown RBP12.05□□□□□ -0.48
SMN2-201ENST00000380741 DNAH11Q96DT5 4516 aa12.05□□□□□ -0.48
SMN2-201ENST00000380741 PIGBOS1A0A0B4J2F0 54 aa12.04□□□□□ -0.48
SMN2-201ENST00000380741 TMEM189A5PLL7 270 aa12.04□□□□□ -0.48
SMN2-201ENST00000380741 ISLRO14498 428 aa12.04□□□□□ -0.48
SMN2-201ENST00000380741 FAUP35544 74 aaKnown RBP12.04□□□□□ -0.48
SMN2-201ENST00000380741 ZNF79Q15937 498 aa12.04□□□□□ -0.48
SMN2-201ENST00000380741 TMEM128Q5BJH2 165 aa12.04□□□□□ -0.48
SMN2-201ENST00000380741 LINC00336Q6ZUF6 198 aa12.04□□□□□ -0.48
SMN2-201ENST00000380741 OR8I2Q8N0Y5 310 aa12.04□□□□□ -0.48
SMN2-201ENST00000380741 THAP8Q8NA92 274 aa12.04□□□□□ -0.48
SMN2-201ENST00000380741 MCFD2Q8NI22 146 aa12.04□□□□□ -0.48
SMN2-201ENST00000380741 TRIM63Q969Q1 353 aa12.04□□□□□ -0.48
SMN2-201ENST00000380741 RFNGQ9Y644 331 aa12.04□□□□□ -0.48
SMN2-201ENST00000380741 PCLOQ9Y6V0 5065 aa12.04□□□□□ -0.48
SMN2-201ENST00000380741 VAMP1P23763 118 aa12.03□□□□□ -0.48
SMN2-201ENST00000380741 PAX9P55771 341 aa12.03□□□□□ -0.48
SMN2-201ENST00000380741 FAM78BQ5VT40 261 aa12.03□□□□□ -0.48
SMN2-201ENST00000380741 DKK2Q9UBU2 259 aa12.03□□□□□ -0.48
SMN2-201ENST00000380741 NOL3O60936 208 aaKnown RBP12.02□□□□□ -0.49
SMN2-201ENST00000380741 SLC25A6P12236 298 aa12.02□□□□□ -0.49
SMN2-201ENST00000380741 PSG9Q00887 426 aa12.02□□□□□ -0.49
SMN2-201ENST00000380741 FAM222AQ5U5X8 452 aa12.02□□□□□ -0.49
SMN2-201ENST00000380741 SPATA31B1PQ5VZV4 182 aa12.02□□□□□ -0.49
SMN2-201ENST00000380741 EBLN2Q6P2I7 272 aa12.02□□□□□ -0.49
SMN2-201ENST00000380741 TOMM5Q8N4H5 51 aa12.02□□□□□ -0.49
SMN2-201ENST00000380741 LRTM2Q8N967 370 aa12.02□□□□□ -0.49
SMN2-201ENST00000380741 C20orf173Q96LM9 149 aa12.02□□□□□ -0.49
SMN2-201ENST00000380741 MAGT1Q9H0U3 335 aa12.02□□□□□ -0.49
SMN2-201ENST00000380741 SLC25A32Q9H2D1 315 aa12.02□□□□□ -0.49
SMN2-201ENST00000380741 A0A0J9YX75 114 aa12.01□□□□□ -0.49
SMN2-201ENST00000380741 A0A1B0GVY2 172 aa12.01□□□□□ -0.49
SMN2-201ENST00000380741 PRSS46E5RG02 174 aa12.01□□□□□ -0.49
SMN2-201ENST00000380741 M0R2N4 97 aa12.01□□□□□ -0.49
SMN2-201ENST00000380741 MED6O75586 246 aa12.01□□□□□ -0.49
SMN2-201ENST00000380741 AP3S2P59780 193 aa12.01□□□□□ -0.49
SMN2-201ENST00000380741 PYDC2Q56P42 97 aa12.01□□□□□ -0.49
SMN2-201ENST00000380741 SAMD13Q5VXD3 122 aa12.01□□□□□ -0.49
SMN2-201ENST00000380741 C1orf158Q8N1D5 194 aa12.01□□□□□ -0.49
SMN2-201ENST00000380741 C16orf92Q96LL3 132 aa12.01□□□□□ -0.49
SMN2-201ENST00000380741 C17orf77Q96MU5 243 aa12.01□□□□□ -0.49
SMN2-201ENST00000380741 NIPSNAP3BQ9BS92 247 aa12.01□□□□□ -0.49
SMN2-201ENST00000380741 SLC25A22Q9H936 323 aa12.01□□□□□ -0.49
SMN2-201ENST00000380741 RPRMQ9NS64 109 aa12.01□□□□□ -0.49
SMN2-201ENST00000380741 PLA2G2EQ9NZK7 142 aa12.01□□□□□ -0.49
SMN2-201ENST00000380741 GOLT1BQ9Y3E0 138 aa12.01□□□□□ -0.49
SMN2-201ENST00000380741 TMED3Q9Y3Q3 217 aa12.01□□□□□ -0.49
SMN2-201ENST00000380741 TEX48A0A1B0GUV7 120 aa12□□□□□ -0.49
SMN2-201ENST00000380741 RTL8CO15255 209 aa12□□□□□ -0.49
SMN2-201ENST00000380741 SYNGR2O43760 224 aa12□□□□□ -0.49
SMN2-201ENST00000380741 CFDP00746 253 aaPredicted RBP12□□□□□ -0.49
SMN2-201ENST00000380741 GALR1P47211 349 aa12□□□□□ -0.49
SMN2-201ENST00000380741 MEOX2P50222 304 aa12□□□□□ -0.49
SMN2-201ENST00000380741 PPP1R1AQ13522 171 aa12□□□□□ -0.49
SMN2-201ENST00000380741 GGNBP1Q5YKI7 109 aa12□□□□□ -0.49
SMN2-201ENST00000380741 CIB3Q96Q77 187 aaPredicted RBP12□□□□□ -0.49
SMN2-201ENST00000380741 C7orf50Q9BRJ6 194 aaKnown RBP12□□□□□ -0.49
SMN2-201ENST00000380741 V9GYH0 126 aa12□□□□□ -0.49
SMN2-201ENST00000380741 LOC102723971A0A1B0GUV8 181 aa11.99□□□□□ -0.49
SMN2-201ENST00000380741 ZNF98A6NK75 572 aa11.99□□□□□ -0.49
SMN2-201ENST00000380741 WRBO00258 174 aa11.99□□□□□ -0.49
SMN2-201ENST00000380741 SFT2D2O95562 160 aa11.99□□□□□ -0.49
SMN2-201ENST00000380741 HBE1P02100 147 aa11.99□□□□□ -0.49
SMN2-201ENST00000380741 GATA2P23769 480 aaPredicted RBP11.99□□□□□ -0.49
SMN2-201ENST00000380741 RPP30P78346 268 aaKnown RBP11.99□□□□□ -0.49
SMN2-201ENST00000380741 TMEM182Q6ZP80 229 aaPredicted RBP11.99□□□□□ -0.49
SMN2-201ENST00000380741 FAM210BQ96KR6 192 aa11.99□□□□□ -0.49
SMN2-201ENST00000380741 SLC25A21Q9BQT8 299 aaPredicted RBP11.99□□□□□ -0.49
SMN2-201ENST00000380741 RSG1Q9BU20 258 aa11.99□□□□□ -0.49
SMN2-201ENST00000380741 DOK5Q9P104 306 aa11.99□□□□□ -0.49
SMN2-201ENST00000380741 SLC45A2Q9UMX9 530 aa11.99□□□□□ -0.49
SMN2-201ENST00000380741 YTHDF2Q9Y5A9 579 aaKnown RBP11.99□□□□□ -0.49
SMN2-201ENST00000380741 PRSS29PA6NIE9 313 aa11.98□□□□□ -0.49
SMN2-201ENST00000380741 H3BP45 60 aa11.98□□□□□ -0.49
SMN2-201ENST00000380741 HOXB5P09067 269 aa11.98□□□□□ -0.49
SMN2-201ENST00000380741 HTN3P15516 51 aa11.98□□□□□ -0.49
SMN2-201ENST00000380741 ORM2P19652 201 aa11.98□□□□□ -0.49
SMN2-201ENST00000380741 SPANXN5Q5MJ07 72 aa11.98□□□□□ -0.49
SMN2-201ENST00000380741 AMTNQ6UX39 209 aa11.98□□□□□ -0.49
SMN2-201ENST00000380741 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.98□□□□□ -0.49
SMN2-201ENST00000380741 BPIFCQ8NFQ6 507 aa11.98□□□□□ -0.49
SMN2-201ENST00000380741 A8MTW9 85 aa11.97□□□□□ -0.49
SMN2-201ENST00000380741 IFNA21P01568 189 aa11.97□□□□□ -0.49
SMN2-201ENST00000380741 AKR1C1Q04828 323 aa11.97□□□□□ -0.49
SMN2-201ENST00000380741 OXA1LQ15070 435 aa11.97□□□□□ -0.49
SMN2-201ENST00000380741 RRN3P1Q2M238 152 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms