RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 NUP37Q8NFH4 326 aa17.31■□□□□ 0.36
TGFBR1-202ENST00000374994 GAFA1Q96PS6 74 aa17.31■□□□□ 0.36
TGFBR1-202ENST00000374994 EXOC3-AS1Q8N2X6 119 aa17.31■□□□□ 0.36
TGFBR1-202ENST00000374994 COX11Q9Y6N1 276 aa17.31■□□□□ 0.36
TGFBR1-202ENST00000374994 hDV102S1A0JD36 115 aa17.31■□□□□ 0.36
TGFBR1-202ENST00000374994 IGHV1-3A0A0C4DH29 117 aa17.3■□□□□ 0.36
TGFBR1-202ENST00000374994 NPIPB5A8MRT5 1133 aa17.3■□□□□ 0.36
TGFBR1-202ENST00000374994 TRAV8-2A0A0B4J237 113 aa17.3■□□□□ 0.36
TGFBR1-202ENST00000374994 PLNP26678 52 aa17.3■□□□□ 0.36
TGFBR1-202ENST00000374994 ARHGEF17Q96PE2 2063 aaPredicted RBP17.3■□□□□ 0.36
TGFBR1-202ENST00000374994 IGKV3-20P01619 116 aa17.3■□□□□ 0.36
TGFBR1-202ENST00000374994 IGLV3-1P01715 115 aa17.3■□□□□ 0.36
TGFBR1-202ENST00000374994 TMEM178BH3BS89 294 aa17.3■□□□□ 0.36
TGFBR1-202ENST00000374994 Q86TA4 180 aa17.3■□□□□ 0.36
TGFBR1-202ENST00000374994 FAM231DQ6ZW35 169 aa17.3■□□□□ 0.36
TGFBR1-202ENST00000374994 ABCA7Q8IZY2 2146 aa17.29■□□□□ 0.36
TGFBR1-202ENST00000374994 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.29■□□□□ 0.36
TGFBR1-202ENST00000374994 C18orf32Q8TCD1 76 aa17.29■□□□□ 0.36
TGFBR1-202ENST00000374994 IGHG3P01860 377 aa17.29■□□□□ 0.36
TGFBR1-202ENST00000374994 CD33P20138 364 aa17.29■□□□□ 0.36
TGFBR1-202ENST00000374994 CENPVQ7Z7K6 275 aaPredicted RBP17.29■□□□□ 0.36
TGFBR1-202ENST00000374994 COX6B1P14854 86 aa17.28■□□□□ 0.36
TGFBR1-202ENST00000374994 PDE6HQ13956 83 aa17.28■□□□□ 0.36
TGFBR1-202ENST00000374994 HS3ST6Q96QI5 342 aa17.28■□□□□ 0.36
TGFBR1-202ENST00000374994 PRDM6Q9NQX0 595 aa17.28■□□□□ 0.36
TGFBR1-202ENST00000374994 WIPF3A6NGB9 483 aa17.28■□□□□ 0.36
TGFBR1-202ENST00000374994 CD7P09564 240 aa17.27■□□□□ 0.36
TGFBR1-202ENST00000374994 RIPPLY3P57055 190 aa17.27■□□□□ 0.36
TGFBR1-202ENST00000374994 RNF182Q8N6D2 247 aa17.27■□□□□ 0.36
TGFBR1-202ENST00000374994 DUX3Q96PT4 197 aa17.27■□□□□ 0.36
TGFBR1-202ENST00000374994 TMEM14BQ9NUH8 114 aa17.27■□□□□ 0.36
TGFBR1-202ENST00000374994 PSMB11A5LHX3 300 aa17.27■□□□□ 0.36
TGFBR1-202ENST00000374994 IGKV1-39P01597 117 aa17.27■□□□□ 0.35
TGFBR1-202ENST00000374994 IGKV1D-39P04432 117 aa17.27■□□□□ 0.35
TGFBR1-202ENST00000374994 EVI2AP22794 236 aa17.27■□□□□ 0.35
TGFBR1-202ENST00000374994 TMEM249Q2WGJ8 235 aa17.27■□□□□ 0.35
TGFBR1-202ENST00000374994 KIR3DL3Q8N743 410 aa17.27■□□□□ 0.35
TGFBR1-202ENST00000374994 VDAC2P45880 294 aaPredicted RBP17.27■□□□□ 0.35
TGFBR1-202ENST00000374994 MINOS1Q5TGZ0 78 aa17.26■□□□□ 0.35
TGFBR1-202ENST00000374994 MINOS1-NBL1R4GNA1 71 aa17.26■□□□□ 0.35
TGFBR1-202ENST00000374994 A0A087X0K7 114 aa17.26■□□□□ 0.35
TGFBR1-202ENST00000374994 MBD3L4A6NDZ8 208 aaPredicted RBP17.26■□□□□ 0.35
TGFBR1-202ENST00000374994 MBD3L3A6NE82 208 aaPredicted RBP17.26■□□□□ 0.35
TGFBR1-202ENST00000374994 MBD3L5A6NJ08 208 aaPredicted RBP17.26■□□□□ 0.35
TGFBR1-202ENST00000374994 MBD3L2Q8NHZ7 208 aaPredicted RBP17.26■□□□□ 0.35
TGFBR1-202ENST00000374994 C11orf52Q96A22 123 aa17.26■□□□□ 0.35
TGFBR1-202ENST00000374994 SH2D1AO60880 128 aa17.26■□□□□ 0.35
TGFBR1-202ENST00000374994 TPTE2P1Q5T6R2 138 aa17.26■□□□□ 0.35
TGFBR1-202ENST00000374994 ICE1Q9Y2F5 2266 aa17.26■□□□□ 0.35
TGFBR1-202ENST00000374994 ZCCHC24Q8N2G6 241 aaKnown RBP17.26■□□□□ 0.35
TGFBR1-202ENST00000374994 JMJD8Q96S16 334 aa17.26■□□□□ 0.35
TGFBR1-202ENST00000374994 SIGLEC9Q9Y336 463 aa17.26■□□□□ 0.35
TGFBR1-202ENST00000374994 ZDBF2Q9HCK1 2354 aa17.26■□□□□ 0.35
TGFBR1-202ENST00000374994 PPIFP30405 207 aaKnown RBP17.26■□□□□ 0.35
TGFBR1-202ENST00000374994 OR13C6PQ8NH95 151 aa17.26■□□□□ 0.35
TGFBR1-202ENST00000374994 IGHV3OR16-10A0A075B7F0 116 aa17.25■□□□□ 0.35
TGFBR1-202ENST00000374994 IGLC2P0DOY2 106 aa17.25■□□□□ 0.35
TGFBR1-202ENST00000374994 IGLC3P0DOY3 106 aa17.25■□□□□ 0.35
TGFBR1-202ENST00000374994 ZNF138P52744 262 aa17.25■□□□□ 0.35
TGFBR1-202ENST00000374994 C9orf139Q6ZV77 190 aa17.25■□□□□ 0.35
TGFBR1-202ENST00000374994 GTSCR1Q86UQ5 136 aa17.25■□□□□ 0.35
TGFBR1-202ENST00000374994 CCL19Q99731 98 aa17.25■□□□□ 0.35
TGFBR1-202ENST00000374994 TRGV11A0A075B6L2 103 aa17.25■□□□□ 0.35
TGFBR1-202ENST00000374994 IGKV2-40A0A087WW87 121 aaPredicted RBP17.25■□□□□ 0.35
TGFBR1-202ENST00000374994 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.25■□□□□ 0.35
TGFBR1-202ENST00000374994 IGKV2D-40P01614 121 aaPredicted RBP17.25■□□□□ 0.35
TGFBR1-202ENST00000374994 CNTFRP26992 372 aa17.25■□□□□ 0.35
TGFBR1-202ENST00000374994 PAX8Q06710 450 aa17.25■□□□□ 0.35
TGFBR1-202ENST00000374994 CD59P13987 128 aa17.25■□□□□ 0.35
TGFBR1-202ENST00000374994 SIGLEC15Q6ZMC9 328 aa17.25■□□□□ 0.35
TGFBR1-202ENST00000374994 GAGE1Q13065 139 aa17.25■□□□□ 0.35
TGFBR1-202ENST00000374994 NCR2O95944 276 aa17.25■□□□□ 0.35
TGFBR1-202ENST00000374994 THBDP07204 575 aa17.25■□□□□ 0.35
TGFBR1-202ENST00000374994 KIR3DS1Q14943 382 aa17.24■□□□□ 0.35
TGFBR1-202ENST00000374994 SMAD7O15105 426 aaKnown RBP17.24■□□□□ 0.35
TGFBR1-202ENST00000374994 SHANK2-AS3Q9BTD1 123 aa17.24■□□□□ 0.35
TGFBR1-202ENST00000374994 TMEM238C9JI98 176 aa17.24■□□□□ 0.35
TGFBR1-202ENST00000374994 CDKN1AP38936 164 aa17.23■□□□□ 0.35
TGFBR1-202ENST00000374994 THSD7BQ9C0I4 1608 aa17.23■□□□□ 0.35
TGFBR1-202ENST00000374994 WNT2P09544 360 aa17.23■□□□□ 0.35
TGFBR1-202ENST00000374994 GAGE12BA1L429 117 aa17.23■□□□□ 0.35
TGFBR1-202ENST00000374994 ESDP10768 282 aa17.23■□□□□ 0.35
TGFBR1-202ENST00000374994 C5orf64Q2M2E5 130 aa17.23■□□□□ 0.35
TGFBR1-202ENST00000374994 V9GYV3 84 aa17.23■□□□□ 0.35
TGFBR1-202ENST00000374994 CACNA1EQ15878 2313 aa17.23■□□□□ 0.35
TGFBR1-202ENST00000374994 DMRTC2Q8IXT2 367 aaPredicted RBP17.22■□□□□ 0.35
TGFBR1-202ENST00000374994 ERG28Q9UKR5 140 aa17.22■□□□□ 0.35
TGFBR1-202ENST00000374994 Q8NFD4 153 aa17.22■□□□□ 0.35
TGFBR1-202ENST00000374994 ANAPC13Q9BS18 74 aa17.22■□□□□ 0.35
TGFBR1-202ENST00000374994 PLXNA4Q9HCM2 1894 aa17.22■□□□□ 0.35
TGFBR1-202ENST00000374994 ZNF524Q96C55 264 aa17.22■□□□□ 0.35
TGFBR1-202ENST00000374994 RSPO1Q2MKA7 263 aaPredicted RBP17.22■□□□□ 0.35
TGFBR1-202ENST00000374994 LINC00205P59089 165 aa17.22■□□□□ 0.35
TGFBR1-202ENST00000374994 Q6ZWC4 215 aa17.22■□□□□ 0.35
TGFBR1-202ENST00000374994 TMEM105Q8N8V8 129 aa17.22■□□□□ 0.35
TGFBR1-202ENST00000374994 IGHV3-11P01762 117 aa17.21■□□□□ 0.35
TGFBR1-202ENST00000374994 FAM168AQ92567 244 aa17.21■□□□□ 0.35
TGFBR1-202ENST00000374994 DPH3P1Q9H4G8 78 aa17.21■□□□□ 0.35
TGFBR1-202ENST00000374994 MYLKQ15746 1914 aa17.21■□□□□ 0.35
TGFBR1-202ENST00000374994 CD300EQ496F6 205 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms