RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 GCSAMQ8N6F7 178 aa12.99□□□□□ -0.33
CHD1L-203ENST00000369259 THAP8Q8NA92 274 aa12.99□□□□□ -0.33
CHD1L-203ENST00000369259 RAB9BQ9NP90 201 aa12.99□□□□□ -0.33
CHD1L-203ENST00000369259 F11RQ9Y624 299 aaKnown RBP12.99□□□□□ -0.33
CHD1L-203ENST00000369259 FAM186AA6NE01 2351 aa12.98□□□□□ -0.33
CHD1L-203ENST00000369259 IGHV3OR15-7A0A075B7D8 119 aa12.98□□□□□ -0.33
CHD1L-203ENST00000369259 SRRM5B3KS81 715 aa12.98□□□□□ -0.33
CHD1L-203ENST00000369259 NKX2-8O15522 239 aa12.98□□□□□ -0.33
CHD1L-203ENST00000369259 CT45A6P0DMU7 189 aa12.98□□□□□ -0.33
CHD1L-203ENST00000369259 CT45A5P0DMU8 189 aa12.98□□□□□ -0.33
CHD1L-203ENST00000369259 CT45A7P0DMV0 189 aa12.98□□□□□ -0.33
CHD1L-203ENST00000369259 ORM2P19652 201 aa12.98□□□□□ -0.33
CHD1L-203ENST00000369259 CKS1BP61024 79 aa12.98□□□□□ -0.33
CHD1L-203ENST00000369259 TM4SF20Q53R12 229 aa12.98□□□□□ -0.33
CHD1L-203ENST00000369259 CIARTQ8N365 385 aaPredicted RBP12.98□□□□□ -0.33
CHD1L-203ENST00000369259 SPANXB1Q9NS25 103 aaPredicted RBP12.98□□□□□ -0.33
CHD1L-203ENST00000369259 KBTBD11-OT1A0A1B0GTJ5 212 aa12.98□□□□□ -0.33
CHD1L-203ENST00000369259 IGHV3-48P01763 117 aa12.98□□□□□ -0.33
CHD1L-203ENST00000369259 Q86TA4 180 aa12.98□□□□□ -0.33
CHD1L-203ENST00000369259 Q9H3A6 140 aa12.98□□□□□ -0.33
CHD1L-203ENST00000369259 A0A1B0GW15 77 aa12.97□□□□□ -0.33
CHD1L-203ENST00000369259 FBLL1A6NHQ2 334 aaKnown RBP12.97□□□□□ -0.33
CHD1L-203ENST00000369259 LYZL6O75951 148 aa12.97□□□□□ -0.33
CHD1L-203ENST00000369259 IGHV1-2P23083 117 aa12.97□□□□□ -0.33
CHD1L-203ENST00000369259 GCSHP23434 173 aa12.97□□□□□ -0.33
CHD1L-203ENST00000369259 INO80CQ6PI98 192 aaPredicted RBP12.97□□□□□ -0.33
CHD1L-203ENST00000369259 ZNF414Q96IQ9 312 aa12.97□□□□□ -0.33
CHD1L-203ENST00000369259 DNAJC13O75165 2243 aa12.97□□□□□ -0.33
CHD1L-203ENST00000369259 CACNA1EQ15878 2313 aa12.97□□□□□ -0.33
CHD1L-203ENST00000369259 C19orf67A6NJJ6 358 aa12.96□□□□□ -0.33
CHD1L-203ENST00000369259 F8W1H4 67 aa12.96□□□□□ -0.33
CHD1L-203ENST00000369259 FXYD2P54710 66 aa12.96□□□□□ -0.33
CHD1L-203ENST00000369259 BCL6BQ8N143 479 aaPredicted RBP12.96□□□□□ -0.33
CHD1L-203ENST00000369259 SIGLEC8Q9NYZ4 499 aa12.96□□□□□ -0.33
CHD1L-203ENST00000369259 LOC389332A0A1B0GUA5 103 aa12.96□□□□□ -0.33
CHD1L-203ENST00000369259 INS-IGF2F8WCM5 200 aa12.96□□□□□ -0.33
CHD1L-203ENST00000369259 SRSF12Q8WXF0 261 aaKnown RBP12.96□□□□□ -0.33
CHD1L-203ENST00000369259 TRAV8-1A0A0A6YYK1 113 aa12.95□□□□□ -0.34
CHD1L-203ENST00000369259 CT45A10P0DMU9 189 aa12.95□□□□□ -0.34
CHD1L-203ENST00000369259 MZT1Q08AG7 82 aa12.95□□□□□ -0.34
CHD1L-203ENST00000369259 TCTEX1D4Q5JR98 221 aa12.95□□□□□ -0.34
CHD1L-203ENST00000369259 ZCCHC24Q8N2G6 241 aaKnown RBP12.95□□□□□ -0.34
CHD1L-203ENST00000369259 MRPL36Q9P0J6 103 aaKnown RBP12.95□□□□□ -0.34
CHD1L-203ENST00000369259 E7EUB6 86 aa12.95□□□□□ -0.34
CHD1L-203ENST00000369259 H3BTX0 84 aa12.95□□□□□ -0.34
CHD1L-203ENST00000369259 CFHR2P36980 270 aa12.95□□□□□ -0.34
CHD1L-203ENST00000369259 WFDC2Q14508 124 aa12.95□□□□□ -0.34
CHD1L-203ENST00000369259 C18orf15Q96N68 181 aa12.95□□□□□ -0.34
CHD1L-203ENST00000369259 HIGD1BQ9P298 99 aa12.95□□□□□ -0.34
CHD1L-203ENST00000369259 hADV38S2A0JD32 116 aa12.94□□□□□ -0.34
CHD1L-203ENST00000369259 GP9P14770 177 aa12.94□□□□□ -0.34
CHD1L-203ENST00000369259 PRNTQ86SH4 94 aa12.94□□□□□ -0.34
CHD1L-203ENST00000369259 PHLDA1Q8WV24 401 aaPredicted RBP12.94□□□□□ -0.34
CHD1L-203ENST00000369259 FLYWCH2Q96CP2 140 aaKnown RBP12.94□□□□□ -0.34
CHD1L-203ENST00000369259 HBDP02042 147 aa12.94□□□□□ -0.34
CHD1L-203ENST00000369259 SUB1P53999 127 aaKnown RBP eCLIP12.94□□□□□ -0.346e-11■■■■■ 33.7
CHD1L-203ENST00000369259 IFI27L1Q96BM0 104 aa12.94□□□□□ -0.34
CHD1L-203ENST00000369259 TRAV26-1A0A087WT03 109 aa12.93□□□□□ -0.34
CHD1L-203ENST00000369259 K7ERJ3 54 aa12.93□□□□□ -0.34
CHD1L-203ENST00000369259 WT1-ASQ06250 92 aa12.93□□□□□ -0.34
CHD1L-203ENST00000369259 SPAG8Q99932 426 aaPredicted RBP12.93□□□□□ -0.34
CHD1L-203ENST00000369259 SSUH2Q9Y2M2 353 aa12.93□□□□□ -0.34
CHD1L-203ENST00000369259 EYSQ5T1H1 3165 aa12.93□□□□□ -0.34
CHD1L-203ENST00000369259 FRYQ5TBA9 3013 aa12.93□□□□□ -0.34
CHD1L-203ENST00000369259 A0A1W2PRD5 423 aa12.93□□□□□ -0.34
CHD1L-203ENST00000369259 A0A1W2PRF3 423 aa12.93□□□□□ -0.34
CHD1L-203ENST00000369259 A0A1W2PRM7 423 aa12.93□□□□□ -0.34
CHD1L-203ENST00000369259 D6R8Y8 96 aa12.93□□□□□ -0.34
CHD1L-203ENST00000369259 NTN3O00634 580 aaPredicted RBP12.93□□□□□ -0.34
CHD1L-203ENST00000369259 IGLV2-11P01706 119 aa12.93□□□□□ -0.34
CHD1L-203ENST00000369259 OSR1Q8TAX0 266 aaPredicted RBP12.93□□□□□ -0.34
CHD1L-203ENST00000369259 PCSK5Q92824 1860 aa12.92□□□□□ -0.34
CHD1L-203ENST00000369259 SPAARA0A1B0GVQ0 90 aa12.92□□□□□ -0.34
CHD1L-203ENST00000369259 ZNF785A8K8V0 405 aa12.92□□□□□ -0.34
CHD1L-203ENST00000369259 TMEM164Q5U3C3 297 aa12.92□□□□□ -0.34
CHD1L-203ENST00000369259 ZNF493Q6ZR52 646 aa12.92□□□□□ -0.34
CHD1L-203ENST00000369259 Q71RC1 249 aaPredicted RBP12.92□□□□□ -0.34
CHD1L-203ENST00000369259 PIFOQ8TCI5 191 aa12.92□□□□□ -0.34
CHD1L-203ENST00000369259 HARBI1Q96MB7 349 aa12.92□□□□□ -0.34
CHD1L-203ENST00000369259 OTORQ9NRC9 128 aa12.92□□□□□ -0.34
CHD1L-203ENST00000369259 U3KQK5 164 aa12.92□□□□□ -0.34
CHD1L-203ENST00000369259 IGKV3-15P01624 115 aa12.92□□□□□ -0.34
CHD1L-203ENST00000369259 CRYBA4P53673 196 aa12.92□□□□□ -0.34
CHD1L-203ENST00000369259 FXYD7P58549 80 aa12.92□□□□□ -0.34
CHD1L-203ENST00000369259 GOLT1AQ6ZVE7 132 aa12.92□□□□□ -0.34
CHD1L-203ENST00000369259 RND1Q92730 232 aa12.92□□□□□ -0.34
CHD1L-203ENST00000369259 MRAP2Q96G30 205 aa12.92□□□□□ -0.34
CHD1L-203ENST00000369259 PRELID3AQ96N28 172 aa12.92□□□□□ -0.34
CHD1L-203ENST00000369259 C22orf46C9J442 243 aa12.91□□□□□ -0.34
CHD1L-203ENST00000369259 E9PLD3 99 aa12.91□□□□□ -0.34
CHD1L-203ENST00000369259 PAX8Q06710 450 aa12.91□□□□□ -0.34
CHD1L-203ENST00000369259 PSMG4Q5JS54 123 aa12.91□□□□□ -0.34
CHD1L-203ENST00000369259 CHAC1Q9BUX1 264 aa12.91□□□□□ -0.34
CHD1L-203ENST00000369259 DKK2Q9UBU2 259 aa12.91□□□□□ -0.34
CHD1L-203ENST00000369259 MRPS17Q9Y2R5 130 aaKnown RBP12.91□□□□□ -0.34
CHD1L-203ENST00000369259 SERTM2A0A1B0GWG4 89 aa12.91□□□□□ -0.34
CHD1L-203ENST00000369259 PRR33A8MZF0 331 aa12.91□□□□□ -0.34
CHD1L-203ENST00000369259 NDUFS7O75251 213 aa12.91□□□□□ -0.34
CHD1L-203ENST00000369259 Q6AWC8 147 aa12.91□□□□□ -0.34
CHD1L-203ENST00000369259 FER1L6-AS2Q96M78 137 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms