RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 SLC25A2Q9BXI2 301 aa11.82□□□□□ -0.52
PRKN-204ENST00000366896 TP73-AS1Q9UF72 201 aa11.82□□□□□ -0.52
PRKN-204ENST00000366896 DYSFO75923 2080 aa11.82□□□□□ -0.52
PRKN-204ENST00000366896 FCN3O75636 299 aa11.82□□□□□ -0.52
PRKN-204ENST00000366896 CCL3L1P16619 93 aa11.82□□□□□ -0.52
PRKN-204ENST00000366896 ATP5L2Q7Z4Y8 100 aa11.82□□□□□ -0.52
PRKN-204ENST00000366896 PDPNQ86YL7 162 aa11.82□□□□□ -0.52
PRKN-204ENST00000366896 WFDC8Q8IUA0 241 aa11.82□□□□□ -0.52
PRKN-204ENST00000366896 ST6GALNAC6Q969X2 333 aa11.82□□□□□ -0.52
PRKN-204ENST00000366896 AMMECR1Q9Y4X0 333 aaPredicted RBP11.82□□□□□ -0.52
PRKN-204ENST00000366896 A0A1B0GXF2 115 aa11.81□□□□□ -0.52
PRKN-204ENST00000366896 UBE2L3P68036 154 aaKnown RBP11.81□□□□□ -0.52
PRKN-204ENST00000366896 THAP8Q8NA92 274 aa11.81□□□□□ -0.52
PRKN-204ENST00000366896 OR4C13Q8NGP0 309 aa11.81□□□□□ -0.52
PRKN-204ENST00000366896 CHRDL1Q9BU40 450 aa11.81□□□□□ -0.52
PRKN-204ENST00000366896 CST9LQ9H4G1 147 aa11.81□□□□□ -0.52
PRKN-204ENST00000366896 CHD6Q8TD26 2715 aa11.81□□□□□ -0.52
PRKN-204ENST00000366896 SUB1P53999 127 aaKnown RBP eCLIP11.81□□□□□ -0.52
PRKN-204ENST00000366896 BVES-AS1Q5T3Y7 98 aa11.81□□□□□ -0.52
PRKN-204ENST00000366896 FAM162BQ5T6X4 162 aa11.81□□□□□ -0.52
PRKN-204ENST00000366896 FLYWCH2Q96CP2 140 aaKnown RBP11.81□□□□□ -0.52
PRKN-204ENST00000366896 HIGD1CA8MV81 97 aa11.8□□□□□ -0.52
PRKN-204ENST00000366896 VWC2LB2RUY7 222 aa11.8□□□□□ -0.52
PRKN-204ENST00000366896 CAMPP49913 170 aa11.8□□□□□ -0.52
PRKN-204ENST00000366896 C10orf55Q5SWW7 151 aa11.8□□□□□ -0.52
PRKN-204ENST00000366896 ERASQ7Z444 233 aa11.8□□□□□ -0.52
PRKN-204ENST00000366896 DEFB125Q8N687 156 aa11.8□□□□□ -0.52
PRKN-204ENST00000366896 TMEM186Q96B77 213 aa11.8□□□□□ -0.52
PRKN-204ENST00000366896 SMIM12Q96EX1 92 aa11.8□□□□□ -0.52
PRKN-204ENST00000366896 ZNF430Q9H8G1 570 aaPredicted RBP11.8□□□□□ -0.52
PRKN-204ENST00000366896 IGHV3-48P01763 117 aa11.8□□□□□ -0.52
PRKN-204ENST00000366896 ZNF137PP52743 207 aa11.8□□□□□ -0.52
PRKN-204ENST00000366896 BPIFB3P59826 476 aa11.8□□□□□ -0.52
PRKN-204ENST00000366896 DIAPH2-AS1Q14236 149 aa11.8□□□□□ -0.52
PRKN-204ENST00000366896 OCIAD2Q56VL3 154 aa11.8□□□□□ -0.52
PRKN-204ENST00000366896 LDLRAD2Q5SZI1 272 aa11.8□□□□□ -0.52
PRKN-204ENST00000366896 LINC01560Q8TB33 94 aa11.8□□□□□ -0.52
PRKN-204ENST00000366896 C7orf69Q9H7B7 122 aa11.8□□□□□ -0.52
PRKN-204ENST00000366896 WASHC3Q9Y3C0 194 aa11.8□□□□□ -0.52
PRKN-204ENST00000366896 TCRBV4S1A1TA0A5B7 111 aa11.79□□□□□ -0.52
PRKN-204ENST00000366896 SYS1-DBNDD2H3BUS1 97 aa11.79□□□□□ -0.52
PRKN-204ENST00000366896 PEX7O00628 323 aa11.79□□□□□ -0.52
PRKN-204ENST00000366896 NUDT3O95989 172 aa11.79□□□□□ -0.52
PRKN-204ENST00000366896 HIST1H1EP10412 219 aaKnown RBP11.79□□□□□ -0.52
PRKN-204ENST00000366896 PVRIGQ6DKI7 326 aa11.79□□□□□ -0.52
PRKN-204ENST00000366896 TMEM108Q6UXF1 575 aa11.79□□□□□ -0.52
PRKN-204ENST00000366896 ZNF329Q86UD4 541 aa11.79□□□□□ -0.52
PRKN-204ENST00000366896 ARFGEF3Q5TH69 2177 aa11.79□□□□□ -0.52
PRKN-204ENST00000366896 SH2D7A6NKC9 451 aaPredicted RBP11.79□□□□□ -0.52
PRKN-204ENST00000366896 CGB1A6NKQ9 187 aa11.79□□□□□ -0.52
PRKN-204ENST00000366896 PYYP10082 97 aa11.79□□□□□ -0.52
PRKN-204ENST00000366896 PSG1P11464 419 aa11.79□□□□□ -0.52
PRKN-204ENST00000366896 SLC25A34Q6PIV7 304 aa11.79□□□□□ -0.52
PRKN-204ENST00000366896 SMIM15Q7Z3B0 74 aa11.79□□□□□ -0.52
PRKN-204ENST00000366896 STXBP6Q8NFX7 210 aa11.79□□□□□ -0.52
PRKN-204ENST00000366896 RNF24Q9Y225 148 aa11.79□□□□□ -0.52
PRKN-204ENST00000366896 OR2T8A6NH00 312 aa11.78□□□□□ -0.52
PRKN-204ENST00000366896 C17orf100A8MU93 164 aa11.78□□□□□ -0.52
PRKN-204ENST00000366896 COX7A2P2O60397 106 aa11.78□□□□□ -0.52
PRKN-204ENST00000366896 FSTL3O95633 263 aa11.78□□□□□ -0.52
PRKN-204ENST00000366896 C10orf113Q5VZT2 155 aa11.78□□□□□ -0.52
PRKN-204ENST00000366896 CHCHD1Q96BP2 118 aaKnown RBP11.78□□□□□ -0.52
PRKN-204ENST00000366896 VPS25Q9BRG1 176 aa11.78□□□□□ -0.52
PRKN-204ENST00000366896 PAXXQ9BUH6 204 aa11.78□□□□□ -0.52
PRKN-204ENST00000366896 FNDC4Q9H6D8 234 aaPredicted RBP11.78□□□□□ -0.52
PRKN-204ENST00000366896 IGHV1-24A0A0C4DH33 117 aa11.78□□□□□ -0.52
PRKN-204ENST00000366896 hDV102S1A0JD36 115 aa11.78□□□□□ -0.52
PRKN-204ENST00000366896 CORTO00230 105 aa11.78□□□□□ -0.52
PRKN-204ENST00000366896 TNFRSF13BO14836 293 aaPredicted RBP11.78□□□□□ -0.52
PRKN-204ENST00000366896 MYCNOSP40205 109 aa11.78□□□□□ -0.52
PRKN-204ENST00000366896 WT1-ASQ06250 92 aa11.78□□□□□ -0.52
PRKN-204ENST00000366896 PRR27Q6MZM9 219 aa11.78□□□□□ -0.52
PRKN-204ENST00000366896 C12orf54Q6X4T0 127 aa11.78□□□□□ -0.52
PRKN-204ENST00000366896 SPTBN1Q01082 2364 aaKnown RBP11.77□□□□□ -0.52
PRKN-204ENST00000366896 IGKV1D-37A0A075B6S9 117 aa11.77□□□□□ -0.53
PRKN-204ENST00000366896 MUC21A0A0G2JKD1 596 aa11.77□□□□□ -0.53
PRKN-204ENST00000366896 MUC21A0A140T8X8 626 aa11.77□□□□□ -0.53
PRKN-204ENST00000366896 IGLV2-23P01705 113 aa11.77□□□□□ -0.53
PRKN-204ENST00000366896 MUC21Q5SSG8 566 aa11.77□□□□□ -0.53
PRKN-204ENST00000366896 TMEM200BQ69YZ2 307 aa11.77□□□□□ -0.53
PRKN-204ENST00000366896 LINC00173Q6ZV60 143 aa11.77□□□□□ -0.53
PRKN-204ENST00000366896 NGBQ9NPG2 151 aa11.77□□□□□ -0.53
PRKN-204ENST00000366896 MRPL36Q9P0J6 103 aaKnown RBP11.77□□□□□ -0.53
PRKN-204ENST00000366896 TOX4O94842 621 aa11.77□□□□□ -0.53
PRKN-204ENST00000366896 HBBP68871 147 aa11.77□□□□□ -0.53
PRKN-204ENST00000366896 BSPH1Q075Z2 132 aa11.77□□□□□ -0.53
PRKN-204ENST00000366896 PATE2Q6UY27 113 aa11.77□□□□□ -0.53
PRKN-204ENST00000366896 ZNF841Q6ZN19 808 aa11.77□□□□□ -0.53
PRKN-204ENST00000366896 ADGRG4Q8IZF6 3080 aa11.76□□□□□ -0.53
PRKN-204ENST00000366896 CBY3A6NI87 242 aa11.76□□□□□ -0.53
PRKN-204ENST00000366896 LEPROTL1O95214 131 aa11.76□□□□□ -0.53
PRKN-204ENST00000366896 HLA-DRB1P01911 266 aa11.76□□□□□ -0.53
PRKN-204ENST00000366896 CRYGCP07315 174 aa11.76□□□□□ -0.53
PRKN-204ENST00000366896 MC5RP33032 325 aa11.76□□□□□ -0.53
PRKN-204ENST00000366896 PAX2Q02962 417 aa11.76□□□□□ -0.53
PRKN-204ENST00000366896 NPIPB3Q92617 1050 aa11.76□□□□□ -0.53
PRKN-204ENST00000366896 FXYD5Q96DB9 178 aa11.76□□□□□ -0.53
PRKN-204ENST00000366896 TMEM191AQ9H0A3 160 aa11.76□□□□□ -0.53
PRKN-204ENST00000366896 SCRT2Q9NQ03 307 aa11.76□□□□□ -0.53
PRKN-204ENST00000366896 NAV3Q8IVL0 2385 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms