RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 ATRQ13535 2644 aa16.84■□□□□ 0.29
HOXA4-201ENST00000360046 MAP1LC3B2A6NCE7 125 aa16.84■□□□□ 0.29
HOXA4-201ENST00000360046 NUDT19A8MXV4 375 aa16.84■□□□□ 0.29
HOXA4-201ENST00000360046 USF2Q15853 346 aaPredicted RBP16.84■□□□□ 0.29
HOXA4-201ENST00000360046 KLHL30-AS1Q8NEE0 82 aa16.84■□□□□ 0.29
HOXA4-201ENST00000360046 ZNF414Q96IQ9 312 aa16.84■□□□□ 0.29
HOXA4-201ENST00000360046 MAP1LC3BQ9GZQ8 125 aa16.84■□□□□ 0.29
HOXA4-201ENST00000360046 FUT9Q9Y231 359 aa16.84■□□□□ 0.29
HOXA4-201ENST00000360046 KRTAP24-1Q3LI83 254 aa16.83■□□□□ 0.28
HOXA4-201ENST00000360046 MIR17HGQ75NE6 70 aa16.83■□□□□ 0.28
HOXA4-201ENST00000360046 LINC00305Q7Z4B0 112 aa16.83■□□□□ 0.28
HOXA4-201ENST00000360046 C4orf3Q8WVX3 66 aa16.83■□□□□ 0.28
HOXA4-201ENST00000360046 RNF2Q99496 336 aa16.83■□□□□ 0.28
HOXA4-201ENST00000360046 A0A1W2PRX2 142 aa16.82■□□□□ 0.28
HOXA4-201ENST00000360046 I3L521 148 aa16.82■□□□□ 0.28
HOXA4-201ENST00000360046 FGF8P55075 233 aaPredicted RBP16.82■□□□□ 0.28
HOXA4-201ENST00000360046 CITED2Q99967 270 aaPredicted RBP16.82■□□□□ 0.28
HOXA4-201ENST00000360046 C20orf24Q9BUV8 137 aa16.82■□□□□ 0.28
HOXA4-201ENST00000360046 MRPL32Q9BYC8 188 aaKnown RBP16.82■□□□□ 0.28
HOXA4-201ENST00000360046 ZFAND3Q9H8U3 227 aa16.82■□□□□ 0.28
HOXA4-201ENST00000360046 TEX46H3BTG2 121 aa16.82■□□□□ 0.28
HOXA4-201ENST00000360046 DEFB136Q30KP8 78 aa16.82■□□□□ 0.28
HOXA4-201ENST00000360046 IGHV4OR15-8A0A075B7B6 117 aa16.81■□□□□ 0.28
HOXA4-201ENST00000360046 A0A087WW49 117 aa16.81■□□□□ 0.28
HOXA4-201ENST00000360046 NDUFA4O00483 81 aa16.81■□□□□ 0.28
HOXA4-201ENST00000360046 RPEL1Q2QD12 228 aa16.81■□□□□ 0.28
HOXA4-201ENST00000360046 TOR2AQ5JU69 321 aa16.81■□□□□ 0.28
HOXA4-201ENST00000360046 MBD3L1Q8WWY6 194 aa16.81■□□□□ 0.28
HOXA4-201ENST00000360046 MRPL27Q9P0M9 148 aaKnown RBP16.81■□□□□ 0.28
HOXA4-201ENST00000360046 PFDN2Q9UHV9 154 aa16.81■□□□□ 0.28
HOXA4-201ENST00000360046 RABAC1Q9UI14 185 aa16.81■□□□□ 0.28
HOXA4-201ENST00000360046 TSSC4Q9Y5U2 329 aaPredicted RBP16.81■□□□□ 0.28
HOXA4-201ENST00000360046 HSPB1P04792 205 aaKnown RBP16.8■□□□□ 0.28
HOXA4-201ENST00000360046 RIPPLY3P57055 190 aa16.8■□□□□ 0.28
HOXA4-201ENST00000360046 MORN5Q5VZ52 161 aa16.8■□□□□ 0.28
HOXA4-201ENST00000360046 SLC25A39Q9BZJ4 359 aaPredicted RBP16.8■□□□□ 0.28
HOXA4-201ENST00000360046 TENM1Q9UKZ4 2725 aa16.79■□□□□ 0.28
HOXA4-201ENST00000360046 ZNF320A2RRD8 509 aa16.79■□□□□ 0.28
HOXA4-201ENST00000360046 HBE1P02100 147 aa16.79■□□□□ 0.28
HOXA4-201ENST00000360046 AWAT1Q58HT5 328 aa16.79■□□□□ 0.28
HOXA4-201ENST00000360046 IQCF2Q8IXL9 164 aa16.79■□□□□ 0.28
HOXA4-201ENST00000360046 WFDC12Q8WWY7 111 aa16.79■□□□□ 0.28
HOXA4-201ENST00000360046 TECRQ9NZ01 308 aaKnown RBP16.79■□□□□ 0.28
HOXA4-201ENST00000360046 TRAV5A0A0B4J249 113 aa16.79■□□□□ 0.28
HOXA4-201ENST00000360046 ZNF207O43670 478 aaKnown RBP16.79■□□□□ 0.28
HOXA4-201ENST00000360046 TAS2R45P59539 299 aa16.79■□□□□ 0.28
HOXA4-201ENST00000360046 LEMD1Q68G75 181 aa16.79■□□□□ 0.28
HOXA4-201ENST00000360046 UNQ9165/PRO28630Q6UXU0 137 aa16.79■□□□□ 0.28
HOXA4-201ENST00000360046 C8orf86Q6ZUL3 223 aa16.79■□□□□ 0.28
HOXA4-201ENST00000360046 S100A7AQ86SG5 101 aa16.79■□□□□ 0.28
HOXA4-201ENST00000360046 SCRT1Q9BWW7 348 aa16.79■□□□□ 0.28
HOXA4-201ENST00000360046 STAG3L2P0CL84 134 aa16.78■□□□□ 0.28
HOXA4-201ENST00000360046 STAG3L3P0CL85 134 aa16.78■□□□□ 0.28
HOXA4-201ENST00000360046 ARL14EPLP0DKL9 152 aa16.78■□□□□ 0.28
HOXA4-201ENST00000360046 C8orf88P0DMB2 117 aa16.78■□□□□ 0.28
HOXA4-201ENST00000360046 KRTAP10-3P60369 221 aa16.78■□□□□ 0.28
HOXA4-201ENST00000360046 FAM106AQ4KMX7 169 aa16.78■□□□□ 0.28
HOXA4-201ENST00000360046 KHDC3LQ587J8 217 aa16.78■□□□□ 0.28
HOXA4-201ENST00000360046 OR11H1Q8NG94 326 aa16.78■□□□□ 0.28
HOXA4-201ENST00000360046 TRAV1-1A0A0B4J248 108 aa16.77■□□□□ 0.28
HOXA4-201ENST00000360046 OR7C2O60412 319 aa16.77■□□□□ 0.28
HOXA4-201ENST00000360046 LYPD6BQ8NI32 183 aa16.77■□□□□ 0.28
HOXA4-201ENST00000360046 TMEM190Q8WZ59 177 aa16.77■□□□□ 0.28
HOXA4-201ENST00000360046 DPF1Q92782 380 aa16.77■□□□□ 0.28
HOXA4-201ENST00000360046 DUX3Q96PT4 197 aa16.77■□□□□ 0.28
HOXA4-201ENST00000360046 METTL26Q96S19 204 aa16.77■□□□□ 0.28
HOXA4-201ENST00000360046 SHANK2-AS3Q9BTD1 123 aa16.77■□□□□ 0.28
HOXA4-201ENST00000360046 LINC01619G3V211 115 aa16.76■□□□□ 0.27
HOXA4-201ENST00000360046 H3BRN7 92 aa16.76■□□□□ 0.27
HOXA4-201ENST00000360046 CXorf1O96002 111 aa16.76■□□□□ 0.27
HOXA4-201ENST00000360046 HOXD3P31249 432 aaPredicted RBP16.76■□□□□ 0.27
HOXA4-201ENST00000360046 CCL20P78556 96 aa16.76■□□□□ 0.27
HOXA4-201ENST00000360046 GPHB5Q86YW7 130 aa16.76■□□□□ 0.27
HOXA4-201ENST00000360046 EIF4E3Q8N5X7 224 aaKnown RBP16.76■□□□□ 0.27
HOXA4-201ENST00000360046 OR1N2Q8NGR9 330 aa16.76■□□□□ 0.27
HOXA4-201ENST00000360046 SLC25A2Q9BXI2 301 aa16.76■□□□□ 0.27
HOXA4-201ENST00000360046 ZP3P21754 424 aa16.76■□□□□ 0.27
HOXA4-201ENST00000360046 S100A7P31151 101 aa16.76■□□□□ 0.27
HOXA4-201ENST00000360046 TMPRSS5Q9H3S3 457 aa16.76■□□□□ 0.27
HOXA4-201ENST00000360046 KRBOX1C9JBD0 128 aa16.75■□□□□ 0.27
HOXA4-201ENST00000360046 NPPCP23582 126 aa16.75■□□□□ 0.27
HOXA4-201ENST00000360046 FAM167A-AS1Q96KT0 104 aa16.75■□□□□ 0.27
HOXA4-201ENST00000360046 ZNF98A6NK75 572 aa16.74■□□□□ 0.27
HOXA4-201ENST00000360046 SLURP1P55000 103 aa16.74■□□□□ 0.27
HOXA4-201ENST00000360046 NSUN5P1Q3KNT7 163 aa16.74■□□□□ 0.27
HOXA4-201ENST00000360046 IL34Q6ZMJ4 242 aa16.74■□□□□ 0.27
HOXA4-201ENST00000360046 PQLC2Q6ZP29 291 aa16.74■□□□□ 0.27
HOXA4-201ENST00000360046 IGHV3-49A0A0A0MS15 119 aa16.73■□□□□ 0.27
HOXA4-201ENST00000360046 SYNJ2BPP57105 145 aa16.73■□□□□ 0.27
HOXA4-201ENST00000360046 TMEM158Q8WZ71 300 aa16.73■□□□□ 0.27
HOXA4-201ENST00000360046 IGHV3OR16-13A0A075B7E8 117 aa16.73■□□□□ 0.27
HOXA4-201ENST00000360046 IGHV3-74A0A0B4J1X5 117 aa16.73■□□□□ 0.27
HOXA4-201ENST00000360046 OR10J4P0C629 311 aa16.73■□□□□ 0.27
HOXA4-201ENST00000360046 PYYP10082 97 aa16.73■□□□□ 0.27
HOXA4-201ENST00000360046 GCHFRP30047 84 aa16.73■□□□□ 0.27
HOXA4-201ENST00000360046 RAX2Q96IS3 184 aa16.73■□□□□ 0.27
HOXA4-201ENST00000360046 DAZ1Q9NQZ3 744 aaKnown RBP16.73■□□□□ 0.27
HOXA4-201ENST00000360046 GNG13Q9P2W3 67 aa16.73■□□□□ 0.27
HOXA4-201ENST00000360046 IGHV3-66A0A0C4DH42 116 aa16.72■□□□□ 0.27
HOXA4-201ENST00000360046 CRYBB3P26998 211 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms