RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 VAX2Q9UIW0 290 aa13.2□□□□□ -0.3
TPM1-205ENST00000357980 PUS1Q9Y606 427 aaKnown RBP eCLIP13.2□□□□□ -0.3
TPM1-205ENST00000357980 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.19□□□□□ -0.3
TPM1-205ENST00000357980 A0A0G2JLM5 398 aa13.19□□□□□ -0.3
TPM1-205ENST00000357980 HSPB1P04792 205 aaKnown RBP13.19□□□□□ -0.3
TPM1-205ENST00000357980 SFTA3P0C7M3 94 aa13.19□□□□□ -0.3
TPM1-205ENST00000357980 PPT1P50897 306 aa13.19□□□□□ -0.3
TPM1-205ENST00000357980 RPL15P61313 204 aaKnown RBP13.19□□□□□ -0.3
TPM1-205ENST00000357980 SLC35B1P78383 322 aa13.19□□□□□ -0.3
TPM1-205ENST00000357980 KIAA0141Q14154 515 aaPredicted RBP13.19□□□□□ -0.3
TPM1-205ENST00000357980 ZNF600Q6ZNG1 722 aa13.19□□□□□ -0.3
TPM1-205ENST00000357980 Q6ZSV7 163 aa13.19□□□□□ -0.3
TPM1-205ENST00000357980 OR5AU1Q8NGC0 362 aa13.19□□□□□ -0.3
TPM1-205ENST00000357980 RXFP4Q8TDU9 374 aa13.19□□□□□ -0.3
TPM1-205ENST00000357980 SLC25A39Q9BZJ4 359 aaPredicted RBP13.19□□□□□ -0.3
TPM1-205ENST00000357980 INAFM1C9JVW0 142 aa13.18□□□□□ -0.3
TPM1-205ENST00000357980 OR7C2O60412 319 aa13.18□□□□□ -0.3
TPM1-205ENST00000357980 TAGLN2P37802 199 aaKnown RBP13.18□□□□□ -0.3
TPM1-205ENST00000357980 FOXE3Q13461 319 aa13.18□□□□□ -0.3
TPM1-205ENST00000357980 ZNF343Q6P1L6 599 aa13.18□□□□□ -0.3
TPM1-205ENST00000357980 TEX38Q6PEX7 206 aa13.18□□□□□ -0.3
TPM1-205ENST00000357980 RNF152Q8N8N0 203 aa13.18□□□□□ -0.3
TPM1-205ENST00000357980 SUN5Q8TC36 379 aa13.18□□□□□ -0.3
TPM1-205ENST00000357980 MYOZ3Q8TDC0 251 aa13.18□□□□□ -0.3
TPM1-205ENST00000357980 ZFAND3Q9H8U3 227 aa13.18□□□□□ -0.3
TPM1-205ENST00000357980 PPP5D1E7EU14 171 aa13.18□□□□□ -0.3
TPM1-205ENST00000357980 PAGE4O60829 102 aa13.18□□□□□ -0.3
TPM1-205ENST00000357980 MEF2BQ02080 365 aaPredicted RBP13.18□□□□□ -0.3
TPM1-205ENST00000357980 C10orf91Q5T1B1 145 aa13.18□□□□□ -0.3
TPM1-205ENST00000357980 SLC35B3Q9H1N7 401 aa13.18□□□□□ -0.3
TPM1-205ENST00000357980 IGHV3-35A0A0C4DH35 117 aa13.17□□□□□ -0.3
TPM1-205ENST00000357980 H3BRN7 92 aa13.17□□□□□ -0.3
TPM1-205ENST00000357980 TRBV12-3P01733 135 aa13.17□□□□□ -0.3
TPM1-205ENST00000357980 IGHV3-11P01762 117 aa13.17□□□□□ -0.3
TPM1-205ENST00000357980 ELANEP08246 267 aa13.17□□□□□ -0.3
TPM1-205ENST00000357980 SRP19P09132 144 aaKnown RBP13.17□□□□□ -0.3
TPM1-205ENST00000357980 CD81P60033 236 aa13.17□□□□□ -0.3
TPM1-205ENST00000357980 SHANK2-AS3Q9BTD1 123 aa13.17□□□□□ -0.3
TPM1-205ENST00000357980 GNB4Q9HAV0 340 aa13.17□□□□□ -0.3
TPM1-205ENST00000357980 TMEM167BQ9NRX6 74 aa13.17□□□□□ -0.3
TPM1-205ENST00000357980 LEMD1Q68G75 181 aa13.16□□□□□ -0.3
TPM1-205ENST00000357980 TOMM20LQ6UXN7 152 aa13.16□□□□□ -0.3
TPM1-205ENST00000357980 OR4X2Q8NGF9 303 aa13.16□□□□□ -0.3
TPM1-205ENST00000357980 SEC11CQ9BY50 192 aa13.16□□□□□ -0.3
TPM1-205ENST00000357980 FN1P02751 2386 aaKnown RBP13.16□□□□□ -0.3
TPM1-205ENST00000357980 RPLP1P05386 114 aaKnown RBP13.16□□□□□ -0.3
TPM1-205ENST00000357980 OR10J4P0C629 311 aa13.16□□□□□ -0.3
TPM1-205ENST00000357980 PYYP10082 97 aa13.16□□□□□ -0.3
TPM1-205ENST00000357980 GP9P14770 177 aa13.16□□□□□ -0.3
TPM1-205ENST00000357980 ARL3P36405 182 aa13.16□□□□□ -0.3
TPM1-205ENST00000357980 UBE2G2P60604 165 aa13.16□□□□□ -0.3
TPM1-205ENST00000357980 RELQ04864 619 aaPredicted RBP13.16□□□□□ -0.3
TPM1-205ENST00000357980 STXBP6Q8NFX7 210 aa13.16□□□□□ -0.3
TPM1-205ENST00000357980 FXYD5Q96DB9 178 aa13.16□□□□□ -0.3
TPM1-205ENST00000357980 PAXXQ9BUH6 204 aa13.16□□□□□ -0.3
TPM1-205ENST00000357980 OR51M1Q9H341 326 aa13.16□□□□□ -0.3
TPM1-205ENST00000357980 YTHDF2Q9Y5A9 579 aaKnown RBP13.16□□□□□ -0.3
TPM1-205ENST00000357980 ARL2-SNX15V9GYD0 113 aa13.16□□□□□ -0.3
TPM1-205ENST00000357980 FAM74A7A6NL05 159 aa13.15□□□□□ -0.3
TPM1-205ENST00000357980 F8W036 122 aa13.15□□□□□ -0.3
TPM1-205ENST00000357980 BMPR1BO00238 502 aa13.15□□□□□ -0.3
TPM1-205ENST00000357980 NDUFS6O75380 124 aaKnown RBP13.15□□□□□ -0.3
TPM1-205ENST00000357980 UBE2L3P68036 154 aaKnown RBP13.15□□□□□ -0.3
TPM1-205ENST00000357980 CYB561D1Q8N8Q1 229 aa13.15□□□□□ -0.3
TPM1-205ENST00000357980 CARHSP1Q9Y2V2 147 aaKnown RBP13.15□□□□□ -0.3
TPM1-205ENST00000357980 IGHV3OR16-8A0A075B7F1 116 aa13.13□□□□□ -0.31
TPM1-205ENST00000357980 CLPSL1A2RUU4 121 aa13.13□□□□□ -0.31
TPM1-205ENST00000357980 ZNF98A6NK75 572 aa13.13□□□□□ -0.31
TPM1-205ENST00000357980 C11orf94C9JXX5 98 aa13.13□□□□□ -0.31
TPM1-205ENST00000357980 ATP5G3P48201 142 aa13.13□□□□□ -0.31
TPM1-205ENST00000357980 FAM209BQ5JX69 171 aa13.13□□□□□ -0.31
TPM1-205ENST00000357980 S100A7AQ86SG5 101 aa13.13□□□□□ -0.31
TPM1-205ENST00000357980 KLHDC1Q8N7A1 406 aa13.13□□□□□ -0.31
TPM1-205ENST00000357980 TMEM14CQ9P0S9 112 aa13.13□□□□□ -0.31
TPM1-205ENST00000357980 RABAC1Q9UI14 185 aa13.13□□□□□ -0.31
TPM1-205ENST00000357980 F8P00451 2351 aa13.13□□□□□ -0.31
TPM1-205ENST00000357980 CST9LP1Q5W188 147 aa13.13□□□□□ -0.31
TPM1-205ENST00000357980 WIPF2Q8TF74 440 aaPredicted RBP13.13□□□□□ -0.31
TPM1-205ENST00000357980 JMJD8Q96S16 334 aa13.13□□□□□ -0.31
TPM1-205ENST00000357980 TXNDC17Q9BRA2 123 aa13.13□□□□□ -0.31
TPM1-205ENST00000357980 CRYBA1P05813 215 aa13.12□□□□□ -0.31
TPM1-205ENST00000357980 FAM90A2PQ658T7 463 aa13.12□□□□□ -0.31
TPM1-205ENST00000357980 OR4F5Q8NH21 305 aa13.12□□□□□ -0.31
TPM1-205ENST00000357980 OR4F4Q96R69 305 aa13.12□□□□□ -0.31
TPM1-205ENST00000357980 C16orf95Q9H693 158 aa13.12□□□□□ -0.31
TPM1-205ENST00000357980 TMEM250H0YL14 139 aa13.11□□□□□ -0.31
TPM1-205ENST00000357980 MRPS12O15235 138 aaKnown RBP13.11□□□□□ -0.31
TPM1-205ENST00000357980 APOC3P02656 99 aa13.11□□□□□ -0.31
TPM1-205ENST00000357980 SOHLH1Q5JUK2 328 aa13.11□□□□□ -0.31
TPM1-205ENST00000357980 UBE2E2Q96LR5 201 aa13.11□□□□□ -0.31
TPM1-205ENST00000357980 OR5B12Q96R08 314 aa13.11□□□□□ -0.31
TPM1-205ENST00000357980 PEF1Q9UBV8 284 aaKnown RBP13.11□□□□□ -0.31
TPM1-205ENST00000357980 A0A1W2PRE2 83 aa13.11□□□□□ -0.31
TPM1-205ENST00000357980 CYSRT1A8MQ03 144 aa13.11□□□□□ -0.31
TPM1-205ENST00000357980 NDUFA4O00483 81 aa13.11□□□□□ -0.31
TPM1-205ENST00000357980 PDE6DO43924 150 aa13.11□□□□□ -0.31
TPM1-205ENST00000357980 GUCA2BQ16661 112 aa13.11□□□□□ -0.31
TPM1-205ENST00000357980 TCTEX1D4Q5JR98 221 aa13.11□□□□□ -0.31
TPM1-205ENST00000357980 CCDC28AQ8IWP9 274 aa13.11□□□□□ -0.31
TPM1-205ENST00000357980 GGTLC3B5MD39 225 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms