RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 FBXL17Q9UF56 701 aa12.1□□□□□ -0.47
PDLIM7-201ENST00000355572 NAP1L6A6NFF2 107 aa12.09□□□□□ -0.47
PDLIM7-201ENST00000355572 MED6O75586 246 aa12.09□□□□□ -0.47
PDLIM7-201ENST00000355572 SPP1P10451 314 aa12.09□□□□□ -0.47
PDLIM7-201ENST00000355572 AP2S1P53680 142 aaPredicted RBP12.09□□□□□ -0.47
PDLIM7-201ENST00000355572 FXYD7P58549 80 aa12.09□□□□□ -0.47
PDLIM7-201ENST00000355572 C11orf45Q8TAV5 145 aa12.09□□□□□ -0.47
PDLIM7-201ENST00000355572 C20orf173Q96LM9 149 aa12.09□□□□□ -0.47
PDLIM7-201ENST00000355572 SLC25A32Q9H2D1 315 aa12.09□□□□□ -0.47
PDLIM7-201ENST00000355572 TBC1D24Q9ULP9 559 aa12.09□□□□□ -0.47
PDLIM7-201ENST00000355572 CELA1Q9UNI1 258 aa12.09□□□□□ -0.47
PDLIM7-201ENST00000355572 F6UB75 175 aa12.08□□□□□ -0.48
PDLIM7-201ENST00000355572 INPP1P49441 399 aa12.08□□□□□ -0.48
PDLIM7-201ENST00000355572 MORN3Q6PF18 240 aaPredicted RBP12.08□□□□□ -0.48
PDLIM7-201ENST00000355572 RPP25LQ8N5L8 163 aaKnown RBP12.08□□□□□ -0.48
PDLIM7-201ENST00000355572 XCL2Q9UBD3 114 aa12.08□□□□□ -0.48
PDLIM7-201ENST00000355572 RCL1Q9Y2P8 373 aaKnown RBP12.08□□□□□ -0.48
PDLIM7-201ENST00000355572 CCSO14618 274 aa12.07□□□□□ -0.48
PDLIM7-201ENST00000355572 SSSCA1O60232 199 aa12.07□□□□□ -0.48
PDLIM7-201ENST00000355572 DEDDO75618 318 aa12.07□□□□□ -0.48
PDLIM7-201ENST00000355572 IGKV3-20P01619 116 aa12.07□□□□□ -0.48
PDLIM7-201ENST00000355572 HLA-DRB4P13762 266 aa12.07□□□□□ -0.48
PDLIM7-201ENST00000355572 ARL16Q0P5N6 197 aa12.07□□□□□ -0.48
PDLIM7-201ENST00000355572 TMEM217Q8N7C4 229 aa12.07□□□□□ -0.48
PDLIM7-201ENST00000355572 CIB3Q96Q77 187 aaPredicted RBP12.07□□□□□ -0.48
PDLIM7-201ENST00000355572 SCRT1Q9BWW7 348 aa12.07□□□□□ -0.48
PDLIM7-201ENST00000355572 PSENENQ9NZ42 101 aa12.07□□□□□ -0.48
PDLIM7-201ENST00000355572 HLA-DRB4X5D2U9 266 aa12.07□□□□□ -0.48
PDLIM7-201ENST00000355572 SNRPGP15A8MWD9 76 aa12.06□□□□□ -0.48
PDLIM7-201ENST00000355572 PRB4P10163 310 aaPredicted RBP12.06□□□□□ -0.48
PDLIM7-201ENST00000355572 NKX2-1P43699 371 aaPredicted RBP12.06□□□□□ -0.48
PDLIM7-201ENST00000355572 C4orf46Q504U0 113 aa12.06□□□□□ -0.48
PDLIM7-201ENST00000355572 MZT2BQ6NZ67 158 aa12.06□□□□□ -0.48
PDLIM7-201ENST00000355572 ZNF767PQ75MW2 155 aa12.06□□□□□ -0.48
PDLIM7-201ENST00000355572 ZNF709Q8N972 641 aa12.06□□□□□ -0.48
PDLIM7-201ENST00000355572 LINC00052Q96N35 136 aa12.06□□□□□ -0.48
PDLIM7-201ENST00000355572 C7orf50Q9BRJ6 194 aaKnown RBP12.06□□□□□ -0.48
PDLIM7-201ENST00000355572 C20orf85Q9H1P6 137 aa12.06□□□□□ -0.48
PDLIM7-201ENST00000355572 SEPSECSQ9HD40 501 aaKnown RBP12.06□□□□□ -0.48
PDLIM7-201ENST00000355572 STRAPQ9Y3F4 350 aaKnown RBP12.06□□□□□ -0.48
PDLIM7-201ENST00000355572 SCGB1D2O95969 90 aa12.05□□□□□ -0.48
PDLIM7-201ENST00000355572 METTL15P1P0C7V9 234 aa12.05□□□□□ -0.48
PDLIM7-201ENST00000355572 RRAS2P62070 204 aaPredicted RBP12.05□□□□□ -0.48
PDLIM7-201ENST00000355572 PRR20EP86478 221 aa12.05□□□□□ -0.48
PDLIM7-201ENST00000355572 PRR20CP86479 221 aa12.05□□□□□ -0.48
PDLIM7-201ENST00000355572 PRR20DP86480 221 aa12.05□□□□□ -0.48
PDLIM7-201ENST00000355572 PRR20BP86481 221 aa12.05□□□□□ -0.48
PDLIM7-201ENST00000355572 PRR20AP86496 221 aa12.05□□□□□ -0.48
PDLIM7-201ENST00000355572 IGFL4Q6B9Z1 124 aa12.05□□□□□ -0.48
PDLIM7-201ENST00000355572 TMEM14EPQ6UXP3 125 aa12.05□□□□□ -0.48
PDLIM7-201ENST00000355572 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.05□□□□□ -0.48
PDLIM7-201ENST00000355572 ZBTB8BQ8NAP8 495 aaPredicted RBP12.05□□□□□ -0.48
PDLIM7-201ENST00000355572 COQ8AQ8NI60 647 aa12.05□□□□□ -0.48
PDLIM7-201ENST00000355572 SEC22CQ9BRL7 303 aa12.05□□□□□ -0.48
PDLIM7-201ENST00000355572 SAV1Q9H4B6 383 aaPredicted RBP12.05□□□□□ -0.48
PDLIM7-201ENST00000355572 DOK5Q9P104 306 aa12.05□□□□□ -0.48
PDLIM7-201ENST00000355572 PIGBOS1A0A0B4J2F0 54 aa12.04□□□□□ -0.48
PDLIM7-201ENST00000355572 ZNF98A6NK75 572 aa12.04□□□□□ -0.48
PDLIM7-201ENST00000355572 LYRM1O43325 122 aa12.04□□□□□ -0.48
PDLIM7-201ENST00000355572 ORM2P19652 201 aa12.04□□□□□ -0.48
PDLIM7-201ENST00000355572 HLA-DMBP28068 263 aa12.04□□□□□ -0.48
PDLIM7-201ENST00000355572 SNRPD3P62318 126 aaKnown RBP12.04□□□□□ -0.48
PDLIM7-201ENST00000355572 AKR1C1Q04828 323 aa12.04□□□□□ -0.48
PDLIM7-201ENST00000355572 IAH1Q2TAA2 248 aaPredicted RBP12.04□□□□□ -0.48
PDLIM7-201ENST00000355572 C1orf194Q5T5A4 169 aa12.04□□□□□ -0.48
PDLIM7-201ENST00000355572 Q6ZTC4 211 aa12.04□□□□□ -0.48
PDLIM7-201ENST00000355572 TMEM144Q7Z5S9 345 aa12.04□□□□□ -0.48
PDLIM7-201ENST00000355572 MITD1Q8WV92 249 aa12.04□□□□□ -0.48
PDLIM7-201ENST00000355572 SMIM8Q96KF7 97 aa12.04□□□□□ -0.48
PDLIM7-201ENST00000355572 SLC35B3Q9H1N7 401 aa12.04□□□□□ -0.48
PDLIM7-201ENST00000355572 SLC25A22Q9H936 323 aa12.04□□□□□ -0.48
PDLIM7-201ENST00000355572 KLK5Q9Y337 293 aaPredicted RBP12.04□□□□□ -0.48
PDLIM7-201ENST00000355572 TRAV6A0A075B6T7 132 aa12.03□□□□□ -0.48
PDLIM7-201ENST00000355572 TRAV8-2A0A0B4J237 113 aa12.03□□□□□ -0.48
PDLIM7-201ENST00000355572 H3BRN7 92 aa12.03□□□□□ -0.48
PDLIM7-201ENST00000355572 MBPP02686 304 aaPredicted RBP12.03□□□□□ -0.48
PDLIM7-201ENST00000355572 MIFP14174 115 aa12.03□□□□□ -0.48
PDLIM7-201ENST00000355572 PSMB3P49720 205 aa12.03□□□□□ -0.48
PDLIM7-201ENST00000355572 BCAP31P51572 246 aa12.03□□□□□ -0.48
PDLIM7-201ENST00000355572 CYP2G1PQ6ZSU1 146 aa12.03□□□□□ -0.48
PDLIM7-201ENST00000355572 OR8I2Q8N0Y5 310 aa12.03□□□□□ -0.48
PDLIM7-201ENST00000355572 OR1B1Q8NGR6 318 aa12.03□□□□□ -0.48
PDLIM7-201ENST00000355572 C11orf1Q9H5F2 150 aa12.03□□□□□ -0.48
PDLIM7-201ENST00000355572 FRAS1Q86XX4 4008 aa12.03□□□□□ -0.48
PDLIM7-201ENST00000355572 VPS13DQ5THJ4 4388 aa12.02□□□□□ -0.49
PDLIM7-201ENST00000355572 SMCO3A2RU48 225 aa12.02□□□□□ -0.49
PDLIM7-201ENST00000355572 PFDN1O60925 122 aa12.02□□□□□ -0.49
PDLIM7-201ENST00000355572 TCRBP04435 133 aa12.02□□□□□ -0.49
PDLIM7-201ENST00000355572 RPP30P78346 268 aaKnown RBP12.02□□□□□ -0.49
PDLIM7-201ENST00000355572 TMEM41BQ5BJD5 291 aa12.02□□□□□ -0.49
PDLIM7-201ENST00000355572 PATE2Q6UY27 113 aa12.02□□□□□ -0.49
PDLIM7-201ENST00000355572 ZNF705AQ6ZN79 300 aaPredicted RBP12.02□□□□□ -0.49
PDLIM7-201ENST00000355572 CHAC2Q8WUX2 184 aa12.02□□□□□ -0.49
PDLIM7-201ENST00000355572 UHRF2Q96PU4 802 aa12.02□□□□□ -0.49
PDLIM7-201ENST00000355572 RSG1Q9BU20 258 aa12.02□□□□□ -0.49
PDLIM7-201ENST00000355572 GSKIPQ9P0R6 139 aa12.02□□□□□ -0.49
PDLIM7-201ENST00000355572 APLNQ9ULZ1 77 aa12.02□□□□□ -0.49
PDLIM7-201ENST00000355572 hCG_2014768A0A024R1R8 64 aa12.01□□□□□ -0.49
PDLIM7-201ENST00000355572 A0A0J9YX75 114 aa12.01□□□□□ -0.49
PDLIM7-201ENST00000355572 C7orf66A4D0T2 115 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms