RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 GBGT1Q8N5D6 347 aa8.78□□□□□ -1
SVIP-201ENST00000354193 Q8N9W7 124 aa8.78□□□□□ -1
SVIP-201ENST00000354193 SGMS2Q8NHU3 365 aa8.78□□□□□ -1
SVIP-201ENST00000354193 CFHR4Q92496 578 aa8.78□□□□□ -1
SVIP-201ENST00000354193 LSM4Q9Y4Z0 139 aaKnown RBP8.78□□□□□ -1
SVIP-201ENST00000354193 TEX22C9J3V5 150 aa8.78□□□□□ -1
SVIP-201ENST00000354193 FAM210BQ96KR6 192 aa8.78□□□□□ -1
SVIP-201ENST00000354193 M0R3E3 92 aa8.77□□□□□ -1
SVIP-201ENST00000354193 GOSR1O95249 250 aa8.77□□□□□ -1
SVIP-201ENST00000354193 ATP5IP56385 69 aaPredicted RBP8.77□□□□□ -1
SVIP-201ENST00000354193 FAM90A2PQ658T7 463 aa8.77□□□□□ -1
SVIP-201ENST00000354193 AAMDCQ9H7C9 122 aa8.77□□□□□ -1
SVIP-201ENST00000354193 ELOA3CA0A087WX78 387 aaPredicted RBP8.77□□□□□ -1.01
SVIP-201ENST00000354193 CSN1S1P47710 185 aa8.77□□□□□ -1.01
SVIP-201ENST00000354193 MRPL54Q6P161 138 aaKnown RBP8.77□□□□□ -1.01
SVIP-201ENST00000354193 C1orf122Q6ZSJ8 110 aa8.77□□□□□ -1.01
SVIP-201ENST00000354193 A0A1W2PRX2 142 aa8.77□□□□□ -1.01
SVIP-201ENST00000354193 CA1P00915 261 aaPredicted RBP8.77□□□□□ -1.01
SVIP-201ENST00000354193 CTRB1P17538 263 aa8.77□□□□□ -1.01
SVIP-201ENST00000354193 CAMPP49913 170 aa8.77□□□□□ -1.01
SVIP-201ENST00000354193 RPL23P62829 140 aaKnown RBP8.77□□□□□ -1.01
SVIP-201ENST00000354193 CTRB2Q6GPI1 263 aa8.77□□□□□ -1.01
SVIP-201ENST00000354193 KCNIP4Q6PIL6 250 aa8.77□□□□□ -1.01
SVIP-201ENST00000354193 CENPVQ7Z7K6 275 aaPredicted RBP8.77□□□□□ -1.01
SVIP-201ENST00000354193 OR10G8Q8NGN5 311 aa8.77□□□□□ -1.01
SVIP-201ENST00000354193 RNF5Q99942 180 aa8.77□□□□□ -1.01
SVIP-201ENST00000354193 OOSP1A8MZH6 123 aa8.77□□□□□ -1.01
SVIP-201ENST00000354193 RABAC1Q9UI14 185 aa8.77□□□□□ -1.01
SVIP-201ENST00000354193 DSCR9P59020 149 aa8.76□□□□□ -1.01
SVIP-201ENST00000354193 SNRPEP62304 92 aaKnown RBP8.76□□□□□ -1.01
SVIP-201ENST00000354193 ZNF600Q6ZNG1 722 aa8.76□□□□□ -1.01
SVIP-201ENST00000354193 RNASE7Q9H1E1 156 aaKnown RBP8.76□□□□□ -1.01
SVIP-201ENST00000354193 ODF3BA8MYP8 253 aa8.76□□□□□ -1.01
SVIP-201ENST00000354193 LY6LH3BQJ8 138 aa8.76□□□□□ -1.01
SVIP-201ENST00000354193 RAB5AP20339 215 aa8.76□□□□□ -1.01
SVIP-201ENST00000354193 OCC1Q8TAD7 63 aa8.76□□□□□ -1.01
SVIP-201ENST00000354193 CSMD2Q7Z408 3487 aa8.76□□□□□ -1.01
SVIP-201ENST00000354193 TRAV1-1A0A0B4J248 108 aa8.76□□□□□ -1.01
SVIP-201ENST00000354193 TMEM250H0YL14 139 aa8.76□□□□□ -1.01
SVIP-201ENST00000354193 PRR20EP86478 221 aa8.76□□□□□ -1.01
SVIP-201ENST00000354193 PRR20CP86479 221 aa8.76□□□□□ -1.01
SVIP-201ENST00000354193 PRR20DP86480 221 aa8.76□□□□□ -1.01
SVIP-201ENST00000354193 PRR20BP86481 221 aa8.76□□□□□ -1.01
SVIP-201ENST00000354193 PRR20AP86496 221 aa8.76□□□□□ -1.01
SVIP-201ENST00000354193 RNF2Q99496 336 aa8.76□□□□□ -1.01
SVIP-201ENST00000354193 CHRDL1Q9BU40 450 aa8.76□□□□□ -1.01
SVIP-201ENST00000354193 SLC25A39Q9BZJ4 359 aaPredicted RBP8.76□□□□□ -1.01
SVIP-201ENST00000354193 SDF2L1Q9HCN8 221 aa8.76□□□□□ -1.01
SVIP-201ENST00000354193 APCP25054 2843 aa8.76□□□□□ -1.01
SVIP-201ENST00000354193 MUC21A0A0G2JKD1 596 aa8.75□□□□□ -1.01
SVIP-201ENST00000354193 MUC21A0A140T8X8 626 aa8.75□□□□□ -1.01
SVIP-201ENST00000354193 S100A9P06702 114 aaKnown RBP8.75□□□□□ -1.01
SVIP-201ENST00000354193 MUC21Q5SSG8 566 aa8.75□□□□□ -1.01
SVIP-201ENST00000354193 S100A7AQ86SG5 101 aa8.75□□□□□ -1.01
SVIP-201ENST00000354193 OR1L6Q8NGR2 347 aa8.75□□□□□ -1.01
SVIP-201ENST00000354193 SMDT1Q9H4I9 107 aa8.75□□□□□ -1.01
SVIP-201ENST00000354193 TRAV20A0A0B4J274 112 aa8.75□□□□□ -1.01
SVIP-201ENST00000354193 IGLC1P0CG04 106 aa8.75□□□□□ -1.01
SVIP-201ENST00000354193 PNRC1Q12796 327 aaPredicted RBP8.75□□□□□ -1.01
SVIP-201ENST00000354193 ZNF114Q8NC26 417 aa8.75□□□□□ -1.01
SVIP-201ENST00000354193 HIST1H2BAQ96A08 127 aa8.75□□□□□ -1.01
SVIP-201ENST00000354193 PRELID1Q9Y255 219 aa8.75□□□□□ -1.01
SVIP-201ENST00000354193 NF1P21359 2839 aa8.75□□□□□ -1.01
SVIP-201ENST00000354193 TRGC2P03986 189 aa8.75□□□□□ -1.01
SVIP-201ENST00000354193 C17orf77Q96MU5 243 aa8.75□□□□□ -1.01
SVIP-201ENST00000354193 NACAE9PAV3 2078 aa8.75□□□□□ -1.01
SVIP-201ENST00000354193 K7EIM0 57 aa8.75□□□□□ -1.01
SVIP-201ENST00000354193 HIST1H1BP16401 226 aaKnown RBP8.75□□□□□ -1.01
SVIP-201ENST00000354193 VWC2Q2TAL6 325 aa8.75□□□□□ -1.01
SVIP-201ENST00000354193 PATE2Q6UY27 113 aa8.75□□□□□ -1.01
SVIP-201ENST00000354193 EEF1AKMT3Q96AZ1 226 aa8.75□□□□□ -1.01
SVIP-201ENST00000354193 PRSS46E5RG02 174 aa8.74□□□□□ -1.01
SVIP-201ENST00000354193 BMPR1BO00238 502 aa8.74□□□□□ -1.01
SVIP-201ENST00000354193 IGKV1-17P01599 117 aa8.74□□□□□ -1.01
SVIP-201ENST00000354193 PAX8Q06710 450 aa8.74□□□□□ -1.01
SVIP-201ENST00000354193 FABP9Q0Z7S8 132 aa8.74□□□□□ -1.01
SVIP-201ENST00000354193 Q6ZS46 218 aa8.74□□□□□ -1.01
SVIP-201ENST00000354193 LYPD6BQ8NI32 183 aa8.74□□□□□ -1.01
SVIP-201ENST00000354193 Q9H3A6 140 aa8.74□□□□□ -1.01
SVIP-201ENST00000354193 K7EQM0 130 aa8.74□□□□□ -1.01
SVIP-201ENST00000354193 STXBP6Q8NFX7 210 aa8.74□□□□□ -1.01
SVIP-201ENST00000354193 CT45A10P0DMU9 189 aa8.74□□□□□ -1.01
SVIP-201ENST00000354193 ARL3P36405 182 aa8.74□□□□□ -1.01
SVIP-201ENST00000354193 C1orf159Q96HA4 380 aa8.74□□□□□ -1.01
SVIP-201ENST00000354193 GGTLC3B5MD39 225 aa8.73□□□□□ -1.01
SVIP-201ENST00000354193 HOXA3O43365 443 aaPredicted RBP8.73□□□□□ -1.01
SVIP-201ENST00000354193 GGCTO75223 188 aaKnown RBP8.73□□□□□ -1.01
SVIP-201ENST00000354193 IGKV3-20P01619 116 aa8.73□□□□□ -1.01
SVIP-201ENST00000354193 WFDC12Q8WWY7 111 aa8.73□□□□□ -1.01
SVIP-201ENST00000354193 MRPL32Q9BYC8 188 aaKnown RBP8.73□□□□□ -1.01
SVIP-201ENST00000354193 PAX1P15863 534 aa8.73□□□□□ -1.01
SVIP-201ENST00000354193 NPPCP23582 126 aa8.73□□□□□ -1.01
SVIP-201ENST00000354193 KLK15Q9H2R5 256 aa8.73□□□□□ -1.01
SVIP-201ENST00000354193 ZNF98A6NK75 572 aa8.73□□□□□ -1.01
SVIP-201ENST00000354193 CIARTQ8N365 385 aaPredicted RBP8.73□□□□□ -1.01
SVIP-201ENST00000354193 DPF1Q92782 380 aa8.73□□□□□ -1.01
SVIP-201ENST00000354193 TRGV9Q99603 122 aa8.73□□□□□ -1.01
SVIP-201ENST00000354193 SEC14L6B5MCN3 397 aa8.73□□□□□ -1.01
SVIP-201ENST00000354193 AP4M1O00189 453 aa8.73□□□□□ -1.01
SVIP-201ENST00000354193 ISLRO14498 428 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms