RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 OVOL3O00110 214 aa11.07□□□□□ -0.64
SMC6-201ENST00000351948 ASIPP42127 132 aa11.07□□□□□ -0.64
SMC6-201ENST00000351948 SIGLEC15Q6ZMC9 328 aa11.07□□□□□ -0.64
SMC6-201ENST00000351948 RNF5Q99942 180 aa11.07□□□□□ -0.64
SMC6-201ENST00000351948 OTORQ9NRC9 128 aa11.07□□□□□ -0.64
SMC6-201ENST00000351948 RPL23P62829 140 aaKnown RBP11.07□□□□□ -0.64
SMC6-201ENST00000351948 BEND2Q8NDZ0 799 aa11.07□□□□□ -0.64
SMC6-201ENST00000351948 REG4Q9BYZ8 158 aa11.07□□□□□ -0.64
SMC6-201ENST00000351948 IGKV1-39P01597 117 aa11.07□□□□□ -0.64
SMC6-201ENST00000351948 IGKV1D-39P04432 117 aa11.07□□□□□ -0.64
SMC6-201ENST00000351948 CD7P09564 240 aa11.07□□□□□ -0.64
SMC6-201ENST00000351948 SRSF4Q08170 494 aaKnown RBP11.07□□□□□ -0.64
SMC6-201ENST00000351948 VAMP3Q15836 100 aa11.07□□□□□ -0.64
SMC6-201ENST00000351948 TEX38Q6PEX7 206 aa11.06□□□□□ -0.64
SMC6-201ENST00000351948 ATG101Q9BSB4 218 aa11.06□□□□□ -0.64
SMC6-201ENST00000351948 HSPB8Q9UJY1 196 aa11.06□□□□□ -0.64
SMC6-201ENST00000351948 KIAA1549LQ6ZVL6 1849 aa11.06□□□□□ -0.64
SMC6-201ENST00000351948 IGHV4-61A0A0C4DH41 118 aa11.06□□□□□ -0.64
SMC6-201ENST00000351948 NPIPB5A8MRT5 1133 aa11.06□□□□□ -0.64
SMC6-201ENST00000351948 DIRC3C9JPN6 131 aa11.06□□□□□ -0.64
SMC6-201ENST00000351948 TRGC1P0CF51 173 aa11.06□□□□□ -0.64
SMC6-201ENST00000351948 HBBP68871 147 aa11.06□□□□□ -0.64
SMC6-201ENST00000351948 DERL1Q9BUN8 251 aa11.06□□□□□ -0.64
SMC6-201ENST00000351948 GPR61Q9BZJ8 451 aa11.06□□□□□ -0.64
SMC6-201ENST00000351948 RANBP2P49792 3224 aaKnown RBP11.06□□□□□ -0.64
SMC6-201ENST00000351948 MEOX2P50222 304 aa11.06□□□□□ -0.64
SMC6-201ENST00000351948 SYNJ2BPP57105 145 aa11.06□□□□□ -0.64
SMC6-201ENST00000351948 FMC1Q96HJ9 113 aa11.06□□□□□ -0.64
SMC6-201ENST00000351948 SDF2L1Q9HCN8 221 aa11.06□□□□□ -0.64
SMC6-201ENST00000351948 OR4C46A6NHA9 309 aa11.06□□□□□ -0.64
SMC6-201ENST00000351948 HIGD1CA8MV81 97 aa11.06□□□□□ -0.64
SMC6-201ENST00000351948 NMUP48645 174 aa11.06□□□□□ -0.64
SMC6-201ENST00000351948 TMEM97Q5BJF2 176 aa11.06□□□□□ -0.64
SMC6-201ENST00000351948 MAP1LC3AQ9H492 121 aa11.06□□□□□ -0.64
SMC6-201ENST00000351948 PSG8Q9UQ74 426 aa11.06□□□□□ -0.64
SMC6-201ENST00000351948 UBE2L6O14933 153 aa11.05□□□□□ -0.64
SMC6-201ENST00000351948 TMEM50AO95807 157 aa11.05□□□□□ -0.64
SMC6-201ENST00000351948 MSMPQ1L6U9 139 aa11.05□□□□□ -0.64
SMC6-201ENST00000351948 FAM120AOSQ5T036 256 aa11.05□□□□□ -0.64
SMC6-201ENST00000351948 SSBP4Q9BWG4 385 aaPredicted RBP11.05□□□□□ -0.64
SMC6-201ENST00000351948 IGHV4-30-2A0A087WSY4 118 aa11.05□□□□□ -0.64
SMC6-201ENST00000351948 OCC1Q8TAD7 63 aa11.05□□□□□ -0.64
SMC6-201ENST00000351948 RPP21Q9H633 154 aaKnown RBP11.05□□□□□ -0.64
SMC6-201ENST00000351948 ZNF98A6NK75 572 aa11.05□□□□□ -0.64
SMC6-201ENST00000351948 A8MXK9 166 aa11.05□□□□□ -0.64
SMC6-201ENST00000351948 Q8TAT8 98 aa11.05□□□□□ -0.64
SMC6-201ENST00000351948 DYSFO75923 2080 aa11.05□□□□□ -0.64
SMC6-201ENST00000351948 CEP192Q8TEP8 1941 aa11.05□□□□□ -0.64
SMC6-201ENST00000351948 TRAV8-1A0A0A6YYK1 113 aa11.05□□□□□ -0.64
SMC6-201ENST00000351948 FXYD7P58549 80 aa11.05□□□□□ -0.64
SMC6-201ENST00000351948 TCF23Q7RTU1 214 aa11.05□□□□□ -0.64
SMC6-201ENST00000351948 TRGV2A0A075B6R0 118 aa11.05□□□□□ -0.64
SMC6-201ENST00000351948 ZNF562Q6V9R5 426 aa11.05□□□□□ -0.64
SMC6-201ENST00000351948 C18orf15Q96N68 181 aa11.05□□□□□ -0.64
SMC6-201ENST00000351948 C1orf122Q6ZSJ8 110 aa11.04□□□□□ -0.64
SMC6-201ENST00000351948 SLC50A1Q9BRV3 221 aa11.04□□□□□ -0.64
SMC6-201ENST00000351948 NPIPB6E9PJ23 425 aa11.04□□□□□ -0.64
SMC6-201ENST00000351948 SCGB1C2P0DMR2 95 aa11.04□□□□□ -0.64
SMC6-201ENST00000351948 GZMBP10144 247 aa11.04□□□□□ -0.64
SMC6-201ENST00000351948 SRRM4A7MD48 611 aaKnown RBP11.04□□□□□ -0.64
SMC6-201ENST00000351948 NDUFB8O95169 186 aa11.04□□□□□ -0.64
SMC6-201ENST00000351948 LEPROTL1O95214 131 aa11.04□□□□□ -0.64
SMC6-201ENST00000351948 STAG3L2P0CL84 134 aa11.04□□□□□ -0.64
SMC6-201ENST00000351948 STAG3L3P0CL85 134 aa11.04□□□□□ -0.64
SMC6-201ENST00000351948 ATOH7Q8N100 152 aa11.04□□□□□ -0.64
SMC6-201ENST00000351948 A0A1B0GUT8 65 aa11.04□□□□□ -0.64
SMC6-201ENST00000351948 MED12LQ86YW9 2145 aa11.04□□□□□ -0.64
SMC6-201ENST00000351948 FER1L6-AS1Q8NA97 138 aa11.04□□□□□ -0.64
SMC6-201ENST00000351948 DEFB104AQ8WTQ1 72 aa11.04□□□□□ -0.64
SMC6-201ENST00000351948 AGMATQ9BSE5 352 aa11.04□□□□□ -0.64
SMC6-201ENST00000351948 IL36BQ9NZH7 164 aa11.04□□□□□ -0.64
SMC6-201ENST00000351948 EML6Q6ZMW3 1958 aa11.03□□□□□ -0.64
SMC6-201ENST00000351948 A0A1W2PRE2 83 aa11.03□□□□□ -0.64
SMC6-201ENST00000351948 M0R3E3 92 aa11.03□□□□□ -0.64
SMC6-201ENST00000351948 AP5S1Q9NUS5 200 aa11.03□□□□□ -0.64
SMC6-201ENST00000351948 CRXO43186 299 aaPredicted RBP11.03□□□□□ -0.64
SMC6-201ENST00000351948 FCN3O75636 299 aa11.03□□□□□ -0.64
SMC6-201ENST00000351948 IGHV4-39P01824 125 aa11.03□□□□□ -0.64
SMC6-201ENST00000351948 PLA2G5P39877 138 aa11.03□□□□□ -0.64
SMC6-201ENST00000351948 TMEM136Q6ZRR5 245 aa11.03□□□□□ -0.64
SMC6-201ENST00000351948 ZNF833PQ6ZTB9 187 aa11.03□□□□□ -0.64
SMC6-201ENST00000351948 C22orf34Q6ZV56 151 aa11.03□□□□□ -0.64
SMC6-201ENST00000351948 CIARTQ8N365 385 aaPredicted RBP11.03□□□□□ -0.64
SMC6-201ENST00000351948 OR5AN1Q8NGI8 311 aa11.03□□□□□ -0.64
SMC6-201ENST00000351948 JMJD1CQ15652 2540 aa11.03□□□□□ -0.64
SMC6-201ENST00000351948 TMEM262E9PQX1 116 aa11.03□□□□□ -0.64
SMC6-201ENST00000351948 IGHV2-70P01814 119 aa11.03□□□□□ -0.64
SMC6-201ENST00000351948 CXorf65A6NEN9 183 aa11.03□□□□□ -0.64
SMC6-201ENST00000351948 FABP5P3A8MUU1 101 aa11.03□□□□□ -0.64
SMC6-201ENST00000351948 FGF16O43320 207 aa11.03□□□□□ -0.64
SMC6-201ENST00000351948 IGHV2-5P01817 119 aa11.02□□□□□ -0.64
SMC6-201ENST00000351948 ZNF106Q9H2Y7 1883 aaKnown RBP11.02□□□□□ -0.64
SMC6-201ENST00000351948 TAS2R60P59551 318 aa11.02□□□□□ -0.65
SMC6-201ENST00000351948 C1QL4Q86Z23 238 aa11.02□□□□□ -0.65
SMC6-201ENST00000351948 TRGV9Q99603 122 aa11.02□□□□□ -0.65
SMC6-201ENST00000351948 CARHSP1Q9Y2V2 147 aaKnown RBP11.02□□□□□ -0.65
SMC6-201ENST00000351948 HERVK_113P61574 105 aa11.02□□□□□ -0.65
SMC6-201ENST00000351948 REC114Q7Z4M0 266 aa11.02□□□□□ -0.65
SMC6-201ENST00000351948 RHPN1-AS1Q9BWJ2 59 aa11.02□□□□□ -0.65
SMC6-201ENST00000351948 ZNF324O75467 553 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms