RNA–Protein interactions for RNA: ENST00000349995.9

COG3-201, Transcript of component of oligomeric golgi complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COG3, Length 4,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-201ENST00000349995 D6R8Y8 96 aa12.49□□□□□ -0.41
COG3-201ENST00000349995 HERV-K104P63124 156 aa12.49□□□□□ -0.41
COG3-201ENST00000349995 ZFP36L1Q07352 338 aaKnown RBP12.49□□□□□ -0.41
COG3-201ENST00000349995 C10orf128Q5T292 105 aa12.49□□□□□ -0.41
COG3-201ENST00000349995 DYSFO75923 2080 aa12.49□□□□□ -0.41
COG3-201ENST00000349995 NTF4P34130 210 aa12.49□□□□□ -0.41
COG3-201ENST00000349995 SSBP2P81877 361 aaPredicted RBP12.49□□□□□ -0.41
COG3-201ENST00000349995 ZNF146Q15072 292 aa12.49□□□□□ -0.41
COG3-201ENST00000349995 DGAT2L7PQ6IED9 249 aa12.49□□□□□ -0.41
COG3-201ENST00000349995 SLC25A10Q9UBX3 287 aaPredicted RBP12.49□□□□□ -0.41
COG3-201ENST00000349995 KIF26AQ9ULI4 1882 aaPredicted RBP12.49□□□□□ -0.41
COG3-201ENST00000349995 SYNGR3O43761 229 aa12.49□□□□□ -0.41
COG3-201ENST00000349995 ASCL4Q6XD76 172 aa12.49□□□□□ -0.41
COG3-201ENST00000349995 V9GYV3 84 aa12.49□□□□□ -0.41
COG3-201ENST00000349995 TRAV12-3A0A0B4J271 114 aa12.49□□□□□ -0.41
COG3-201ENST00000349995 RASL11AQ6T310 242 aa12.49□□□□□ -0.41
COG3-201ENST00000349995 Q9H3A6 140 aa12.49□□□□□ -0.41
COG3-201ENST00000349995 C9orf172C9J069 976 aa12.48□□□□□ -0.41
COG3-201ENST00000349995 MGST3O14880 152 aa12.48□□□□□ -0.41
COG3-201ENST00000349995 LINC00205P59089 165 aa12.48□□□□□ -0.41
COG3-201ENST00000349995 ATP5G2Q06055 141 aa12.48□□□□□ -0.41
COG3-201ENST00000349995 RAB1CQ92928 201 aa12.48□□□□□ -0.41
COG3-201ENST00000349995 LY96Q9Y6Y9 160 aa12.48□□□□□ -0.41
COG3-201ENST00000349995 CACNA1BQ00975 2339 aa12.48□□□□□ -0.41
COG3-201ENST00000349995 IGHV1-24A0A0C4DH33 117 aa12.48□□□□□ -0.41
COG3-201ENST00000349995 NDUFB3O43676 98 aa12.48□□□□□ -0.41
COG3-201ENST00000349995 CSRP1P21291 193 aaKnown RBP12.48□□□□□ -0.41
COG3-201ENST00000349995 KLF12Q9Y4X4 402 aa12.48□□□□□ -0.41
COG3-201ENST00000349995 RPL27AP46776 148 aaKnown RBP12.48□□□□□ -0.41
COG3-201ENST00000349995 PRDM14Q9GZV8 571 aa12.48□□□□□ -0.41
COG3-201ENST00000349995 KLF17Q5JT82 389 aaPredicted RBP12.47□□□□□ -0.41
COG3-201ENST00000349995 HTTP42858 3142 aa12.47□□□□□ -0.41
COG3-201ENST00000349995 WFDC2Q14508 124 aa12.47□□□□□ -0.41
COG3-201ENST00000349995 RPRMLQ8N4K4 120 aa12.47□□□□□ -0.41
COG3-201ENST00000349995 IFI27P40305 119 aaPredicted RBP12.47□□□□□ -0.41
COG3-201ENST00000349995 DLX6P56179 175 aa12.47□□□□□ -0.41
COG3-201ENST00000349995 C2orf16Q68DN1 1984 aa12.47□□□□□ -0.41
COG3-201ENST00000349995 TNRC6AQ8NDV7 1962 aaKnown RBP12.47□□□□□ -0.41
COG3-201ENST00000349995 OR13A1Q8NGR1 328 aa12.47□□□□□ -0.41
COG3-201ENST00000349995 CCL17Q92583 94 aa12.47□□□□□ -0.41
COG3-201ENST00000349995 TMEM54Q969K7 222 aa12.47□□□□□ -0.41
COG3-201ENST00000349995 FMC1Q96HJ9 113 aa12.47□□□□□ -0.41
COG3-201ENST00000349995 MUC6Q6W4X9 2439 aa12.46□□□□□ -0.41
COG3-201ENST00000349995 NTN3O00634 580 aaPredicted RBP12.46□□□□□ -0.41
COG3-201ENST00000349995 SLC25A53Q5H9E4 307 aa12.46□□□□□ -0.41
COG3-201ENST00000349995 C9orf153Q5TBE3 101 aa12.46□□□□□ -0.41
COG3-201ENST00000349995 CALYQ9NYX4 217 aa12.46□□□□□ -0.41
COG3-201ENST00000349995 FRMD6-AS1P0C7T7 363 aa12.46□□□□□ -0.41
COG3-201ENST00000349995 FDCSPQ8NFU4 85 aa12.46□□□□□ -0.41
COG3-201ENST00000349995 TP73-AS1Q9UF72 201 aa12.46□□□□□ -0.41
COG3-201ENST00000349995 FAM214BQ7L5A3 538 aa12.46□□□□□ -0.42
COG3-201ENST00000349995 BRCA2P51587 3418 aa12.46□□□□□ -0.42
COG3-201ENST00000349995 RANBP2P49792 3224 aaKnown RBP12.46□□□□□ -0.42
COG3-201ENST00000349995 IGHV3-35A0A0C4DH35 117 aa12.45□□□□□ -0.42
COG3-201ENST00000349995 C9JAW5 83 aa12.45□□□□□ -0.42
COG3-201ENST00000349995 CIARTQ8N365 385 aaPredicted RBP12.45□□□□□ -0.42
COG3-201ENST00000349995 OR13C6PQ8NH95 151 aa12.45□□□□□ -0.42
COG3-201ENST00000349995 EDA2RQ9HAV5 297 aa12.45□□□□□ -0.42
COG3-201ENST00000349995 TFF1P04155 84 aa12.45□□□□□ -0.42
COG3-201ENST00000349995 TNFAIP6P98066 277 aaPredicted RBP12.45□□□□□ -0.42
COG3-201ENST00000349995 SRSF6Q13247 344 aaKnown RBP12.45□□□□□ -0.42
COG3-201ENST00000349995 LINC00173Q6ZV60 143 aa12.45□□□□□ -0.42
COG3-201ENST00000349995 ANAPC10Q9UM13 185 aa12.45□□□□□ -0.42
COG3-201ENST00000349995 PINLYPA6NC86 204 aa12.45□□□□□ -0.42
COG3-201ENST00000349995 C15orf62A8K5M9 175 aa12.44□□□□□ -0.42
COG3-201ENST00000349995 MORN2Q502X0 79 aa12.44□□□□□ -0.42
COG3-201ENST00000349995 MEIG1Q5JSS6 88 aa12.44□□□□□ -0.42
COG3-201ENST00000349995 MLNRO43193 412 aa12.44□□□□□ -0.42
COG3-201ENST00000349995 C3orf56Q8N813 242 aa12.44□□□□□ -0.42
COG3-201ENST00000349995 FOXI3A8MTJ6 420 aaPredicted RBP12.44□□□□□ -0.42
COG3-201ENST00000349995 PTGDSP41222 190 aa12.44□□□□□ -0.42
COG3-201ENST00000349995 ZNRF1Q8ND25 227 aa12.44□□□□□ -0.42
COG3-201ENST00000349995 USF3Q68DE3 2245 aa12.44□□□□□ -0.42
COG3-201ENST00000349995 E9PLN8 166 aa12.43□□□□□ -0.42
COG3-201ENST00000349995 PPDPFLQ8WWR9 84 aa12.43□□□□□ -0.42
COG3-201ENST00000349995 SMKR1H3BMG3 65 aa12.43□□□□□ -0.42
COG3-201ENST00000349995 IFITM1P13164 125 aa12.43□□□□□ -0.42
COG3-201ENST00000349995 NPPCP23582 126 aa12.43□□□□□ -0.42
COG3-201ENST00000349995 SRSF7Q16629 238 aaKnown RBP eCLIP12.43□□□□□ -0.42
COG3-201ENST00000349995 CCL13Q99616 98 aa12.43□□□□□ -0.42
COG3-201ENST00000349995 TRAV2A0A0B4J234 112 aa12.43□□□□□ -0.42
COG3-201ENST00000349995 F2RL2O00254 374 aa12.43□□□□□ -0.42
COG3-201ENST00000349995 TNFRSF6BO95407 300 aa12.43□□□□□ -0.42
COG3-201ENST00000349995 Q6AWC8 147 aa12.43□□□□□ -0.42
COG3-201ENST00000349995 RAX2Q96IS3 184 aa12.43□□□□□ -0.42
COG3-201ENST00000349995 REPIN1Q9BWE0 567 aaKnown RBP12.43□□□□□ -0.42
COG3-201ENST00000349995 IGLV3-32A0A0A0MS00 114 aa12.42□□□□□ -0.42
COG3-201ENST00000349995 ZNF883P0CG24 379 aa12.42□□□□□ -0.42
COG3-201ENST00000349995 JPT1Q9UK76 154 aa12.42□□□□□ -0.42
COG3-201ENST00000349995 LAMA2P24043 3122 aaKnown RBP12.42□□□□□ -0.42
COG3-201ENST00000349995 K7EMI3 77 aa12.42□□□□□ -0.42
COG3-201ENST00000349995 K7EN84 100 aa12.42□□□□□ -0.42
COG3-201ENST00000349995 FOXG1P55316 489 aaPredicted RBP12.42□□□□□ -0.42
COG3-201ENST00000349995 TMEM78Q5T7P6 136 aa12.42□□□□□ -0.42
COG3-201ENST00000349995 PCDH15Q96QU1 1955 aa12.42□□□□□ -0.42
COG3-201ENST00000349995 HTN1P15515 57 aa12.42□□□□□ -0.42
COG3-201ENST00000349995 ZNF56Q15929 161 aa12.42□□□□□ -0.42
COG3-201ENST00000349995 M0R381 172 aa12.41□□□□□ -0.42
COG3-201ENST00000349995 TNFRSF1AP19438 455 aa12.41□□□□□ -0.42
COG3-201ENST00000349995 SLC25A48Q6ZT89 311 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms