RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 SEPSECSQ9HD40 501 aaKnown RBP20.7■□□□□ 0.9
SSBP4-202ENST00000348495 UBQLN2Q9UHD9 624 aa20.7■□□□□ 0.9
SSBP4-202ENST00000348495 SEC14L6B5MCN3 397 aa20.69■□□□□ 0.9
SSBP4-202ENST00000348495 SLURP1P55000 103 aa20.69■□□□□ 0.9
SSBP4-202ENST00000348495 REC114Q7Z4M0 266 aa20.69■□□□□ 0.9
SSBP4-202ENST00000348495 RNF141Q8WVD5 230 aa20.69■□□□□ 0.9
SSBP4-202ENST00000348495 HIGD1AQ9Y241 93 aa20.69■□□□□ 0.9
SSBP4-202ENST00000348495 LGALS9O00182 355 aa20.68■□□□□ 0.9
SSBP4-202ENST00000348495 RIPPLY3P57055 190 aa20.68■□□□□ 0.9
SSBP4-202ENST00000348495 ZNF767PQ75MW2 155 aa20.68■□□□□ 0.9
SSBP4-202ENST00000348495 C1QL4Q86Z23 238 aa20.68■□□□□ 0.9
SSBP4-202ENST00000348495 UHRF2Q96PU4 802 aa20.68■□□□□ 0.9
SSBP4-202ENST00000348495 C20orf24Q9BUV8 137 aa20.68■□□□□ 0.9
SSBP4-202ENST00000348495 ZNF726P1Q15940 193 aa20.67■□□□□ 0.9
SSBP4-202ENST00000348495 ZNF320A2RRD8 509 aa20.67■□□□□ 0.9
SSBP4-202ENST00000348495 RGS13O14921 159 aa20.67■□□□□ 0.9
SSBP4-202ENST00000348495 SYNJ2BPP57105 145 aa20.67■□□□□ 0.9
SSBP4-202ENST00000348495 FAM78BQ5VT40 261 aa20.67■□□□□ 0.9
SSBP4-202ENST00000348495 FAM122CQ6P4D5 195 aa20.67■□□□□ 0.9
SSBP4-202ENST00000348495 SLC25A39Q9BZJ4 359 aaPredicted RBP20.67■□□□□ 0.9
SSBP4-202ENST00000348495 RABAC1Q9UI14 185 aa20.67■□□□□ 0.9
SSBP4-202ENST00000348495 RHOBP62745 196 aa20.66■□□□□ 0.9
SSBP4-202ENST00000348495 MORN5Q5VZ52 161 aa20.66■□□□□ 0.9
SSBP4-202ENST00000348495 LINC00305Q7Z4B0 112 aa20.66■□□□□ 0.9
SSBP4-202ENST00000348495 FAM213BQ8TBF2 198 aa20.66■□□□□ 0.9
SSBP4-202ENST00000348495 RNF2Q99496 336 aa20.66■□□□□ 0.9
SSBP4-202ENST00000348495 A8MWP6 167 aa20.65■□□□□ 0.9
SSBP4-202ENST00000348495 K7EMT4 169 aa20.65■□□□□ 0.9
SSBP4-202ENST00000348495 CRYBB3P26998 211 aa20.65■□□□□ 0.9
SSBP4-202ENST00000348495 SPATA31B1PQ5VZV4 182 aa20.65■□□□□ 0.9
SSBP4-202ENST00000348495 SSX7Q7RTT5 188 aa20.65■□□□□ 0.9
SSBP4-202ENST00000348495 SHANK2-AS3Q9BTD1 123 aa20.65■□□□□ 0.9
SSBP4-202ENST00000348495 MRPL32Q9BYC8 188 aaKnown RBP20.65■□□□□ 0.9
SSBP4-202ENST00000348495 ACTR3CQ9C0K3 210 aaPredicted RBP20.65■□□□□ 0.9
SSBP4-202ENST00000348495 FUT9Q9Y231 359 aa20.65■□□□□ 0.9
SSBP4-202ENST00000348495 U3KQE9 123 aa20.65■□□□□ 0.9
SSBP4-202ENST00000348495 COL6A5A8TX70 2615 aa20.65■□□□□ 0.9
SSBP4-202ENST00000348495 MYCNOSP40205 109 aa20.64■□□□□ 0.9
SSBP4-202ENST00000348495 CDC34P49427 236 aaPredicted RBP20.64■□□□□ 0.9
SSBP4-202ENST00000348495 RAB24Q969Q5 203 aa20.64■□□□□ 0.9
SSBP4-202ENST00000348495 METTL26Q96S19 204 aa20.64■□□□□ 0.9
SSBP4-202ENST00000348495 SLC25A22Q9H936 323 aa20.64■□□□□ 0.9
SSBP4-202ENST00000348495 DAZ1Q9NQZ3 744 aaKnown RBP20.64■□□□□ 0.9
SSBP4-202ENST00000348495 UFC1Q9Y3C8 167 aa20.64■□□□□ 0.9
SSBP4-202ENST00000348495 ZNF705EA8MWA4 302 aaPredicted RBP20.64■□□□□ 0.89
SSBP4-202ENST00000348495 H3BRN7 92 aa20.64■□□□□ 0.89
SSBP4-202ENST00000348495 ZNF207O43670 478 aaKnown RBP20.64■□□□□ 0.89
SSBP4-202ENST00000348495 MIR17HGQ75NE6 70 aa20.64■□□□□ 0.89
SSBP4-202ENST00000348495 DLX4Q92988 240 aaPredicted RBP20.64■□□□□ 0.89
SSBP4-202ENST00000348495 NPPCP23582 126 aa20.63■□□□□ 0.89
SSBP4-202ENST00000348495 TM4SF20Q53R12 229 aa20.63■□□□□ 0.89
SSBP4-202ENST00000348495 C12orf54Q6X4T0 127 aa20.63■□□□□ 0.89
SSBP4-202ENST00000348495 CTXND1A0A1B0GTU2 59 aa20.62■□□□□ 0.89
SSBP4-202ENST00000348495 A0A1W2PPV4 95 aa20.62■□□□□ 0.89
SSBP4-202ENST00000348495 TMEM213A2RRL7 107 aa20.62■□□□□ 0.89
SSBP4-202ENST00000348495 EIF3GO75821 320 aaKnown RBP eCLIP20.62■□□□□ 0.89
SSBP4-202ENST00000348495 LRRC20Q8TCA0 184 aa20.62■□□□□ 0.89
SSBP4-202ENST00000348495 SAT2Q96F10 170 aaPredicted RBP20.62■□□□□ 0.89
SSBP4-202ENST00000348495 SCRT1Q9BWW7 348 aa20.62■□□□□ 0.89
SSBP4-202ENST00000348495 APOHP02749 345 aaPredicted RBP20.61■□□□□ 0.89
SSBP4-202ENST00000348495 S100A7AQ86SG5 101 aa20.61■□□□□ 0.89
SSBP4-202ENST00000348495 C3orf56Q8N813 242 aa20.61■□□□□ 0.89
SSBP4-202ENST00000348495 MBD3L1Q8WWY6 194 aa20.61■□□□□ 0.89
SSBP4-202ENST00000348495 FAM167A-AS1Q96KT0 104 aa20.61■□□□□ 0.89
SSBP4-202ENST00000348495 ZNF98A6NK75 572 aa20.61■□□□□ 0.89
SSBP4-202ENST00000348495 TRAV5A0A0B4J249 113 aa20.6■□□□□ 0.89
SSBP4-202ENST00000348495 BUB3O43684 328 aa20.6■□□□□ 0.89
SSBP4-202ENST00000348495 NMBP08949 121 aa20.6■□□□□ 0.89
SSBP4-202ENST00000348495 LEMD1Q68G75 181 aa20.6■□□□□ 0.89
SSBP4-202ENST00000348495 SLC25A2Q9BXI2 301 aa20.6■□□□□ 0.89
SSBP4-202ENST00000348495 TECRQ9NZ01 308 aaKnown RBP20.6■□□□□ 0.89
SSBP4-202ENST00000348495 HMGB3O15347 200 aaKnown RBP20.59■□□□□ 0.89
SSBP4-202ENST00000348495 STAG3L2P0CL84 134 aa20.59■□□□□ 0.89
SSBP4-202ENST00000348495 STAG3L3P0CL85 134 aa20.59■□□□□ 0.89
SSBP4-202ENST00000348495 C8orf88P0DMB2 117 aa20.59■□□□□ 0.89
SSBP4-202ENST00000348495 S100A7P31151 101 aa20.59■□□□□ 0.89
SSBP4-202ENST00000348495 OR9G4Q8NGQ1 327 aa20.59■□□□□ 0.89
SSBP4-202ENST00000348495 STAB1Q9NY15 2570 aa20.59■□□□□ 0.89
SSBP4-202ENST00000348495 IGHV7-4-1A0A0J9YVY3 117 aa20.58■□□□□ 0.89
SSBP4-202ENST00000348495 H2AFB1P0C5Y9 115 aa20.58■□□□□ 0.89
SSBP4-202ENST00000348495 EDN2P20800 178 aa20.58■□□□□ 0.89
SSBP4-202ENST00000348495 BLOC1S1P78537 153 aa20.58■□□□□ 0.89
SSBP4-202ENST00000348495 SHISA2Q6UWI4 295 aa20.58■□□□□ 0.89
SSBP4-202ENST00000348495 OR4F17Q8NGA8 305 aa20.58■□□□□ 0.89
SSBP4-202ENST00000348495 OR4F4Q96R69 305 aa20.58■□□□□ 0.89
SSBP4-202ENST00000348495 PFDN2Q9UHV9 154 aa20.58■□□□□ 0.89
SSBP4-202ENST00000348495 LCN15Q6UWW0 184 aa20.58■□□□□ 0.88
SSBP4-202ENST00000348495 PCNPQ8WW12 178 aaKnown RBP20.58■□□□□ 0.88
SSBP4-202ENST00000348495 SMPXQ9UHP9 88 aa20.58■□□□□ 0.88
SSBP4-202ENST00000348495 IGHV3-49A0A0A0MS15 119 aa20.57■□□□□ 0.88
SSBP4-202ENST00000348495 MAP1LC3B2A6NCE7 125 aa20.57■□□□□ 0.88
SSBP4-202ENST00000348495 C2orf70A6NJV1 201 aa20.57■□□□□ 0.88
SSBP4-202ENST00000348495 IL34Q6ZMJ4 242 aa20.57■□□□□ 0.88
SSBP4-202ENST00000348495 SFT2D1Q8WV19 159 aa20.57■□□□□ 0.88
SSBP4-202ENST00000348495 ZNF503Q96F45 646 aa20.57■□□□□ 0.88
SSBP4-202ENST00000348495 MAP1LC3BQ9GZQ8 125 aa20.57■□□□□ 0.88
SSBP4-202ENST00000348495 IGHV3OR16-13A0A075B7E8 117 aa20.56■□□□□ 0.88
SSBP4-202ENST00000348495 IGHV3-74A0A0B4J1X5 117 aa20.56■□□□□ 0.88
SSBP4-202ENST00000348495 TRAV1-1A0A0B4J248 108 aa20.56■□□□□ 0.88
SSBP4-202ENST00000348495 TAS2R45P59539 299 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms