RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 SMIM13P0DJ93 91 aa12.35□□□□□ -0.43
LMNA-201ENST00000347559 PPIAL4FP0DN26 164 aa12.35□□□□□ -0.43
LMNA-201ENST00000347559 CFHR2P36980 270 aa12.35□□□□□ -0.43
LMNA-201ENST00000347559 TIMM23BQ5SRD1 257 aa12.35□□□□□ -0.43
LMNA-201ENST00000347559 OR1L8Q8NGR8 309 aa12.35□□□□□ -0.43
LMNA-201ENST00000347559 IGHV1-2P23083 117 aa12.34□□□□□ -0.43
LMNA-201ENST00000347559 ATP6V0BQ99437 205 aa12.34□□□□□ -0.43
LMNA-201ENST00000347559 TTTY13Q9BZ97 58 aa12.34□□□□□ -0.43
LMNA-201ENST00000347559 INTS1Q8N201 2190 aaKnown RBP12.34□□□□□ -0.43
LMNA-201ENST00000347559 A0A1B0GUT8 65 aa12.34□□□□□ -0.43
LMNA-201ENST00000347559 GAGE12HA6NDE8 117 aa12.34□□□□□ -0.43
LMNA-201ENST00000347559 CFIP05156 583 aa12.33□□□□□ -0.44
LMNA-201ENST00000347559 MYCNOSP40205 109 aa12.33□□□□□ -0.44
LMNA-201ENST00000347559 DUX4L9Q6RFH8 374 aaPredicted RBP12.33□□□□□ -0.44
LMNA-201ENST00000347559 DEFB108BQ8NET1 73 aa12.33□□□□□ -0.44
LMNA-201ENST00000347559 OR9G4Q8NGQ1 327 aa12.33□□□□□ -0.44
LMNA-201ENST00000347559 TCRBV4S1A1TA0A5B7 111 aa12.33□□□□□ -0.44
LMNA-201ENST00000347559 NKX2-8O15522 239 aa12.33□□□□□ -0.44
LMNA-201ENST00000347559 TCRAP04437 139 aa12.33□□□□□ -0.44
LMNA-201ENST00000347559 HOXC12P31275 282 aa12.33□□□□□ -0.44
LMNA-201ENST00000347559 RAB9AP51151 201 aa12.33□□□□□ -0.44
LMNA-201ENST00000347559 CT83Q5H943 113 aa12.33□□□□□ -0.44
LMNA-201ENST00000347559 MTURNQ8N3F0 131 aa12.33□□□□□ -0.44
LMNA-201ENST00000347559 OR4X2Q8NGF9 303 aa12.33□□□□□ -0.44
LMNA-201ENST00000347559 FMC1Q96HJ9 113 aa12.33□□□□□ -0.44
LMNA-201ENST00000347559 Q9H3A6 140 aa12.33□□□□□ -0.44
LMNA-201ENST00000347559 KLF12Q9Y4X4 402 aa12.33□□□□□ -0.44
LMNA-201ENST00000347559 SPAARA0A1B0GVQ0 90 aa12.33□□□□□ -0.44
LMNA-201ENST00000347559 HAX1O00165 279 aa12.33□□□□□ -0.44
LMNA-201ENST00000347559 NDUFS8O00217 210 aa12.33□□□□□ -0.44
LMNA-201ENST00000347559 LTAP01374 205 aa12.33□□□□□ -0.44
LMNA-201ENST00000347559 C17orf58Q2M2W7 97 aa12.33□□□□□ -0.44
LMNA-201ENST00000347559 CACNG8Q8WXS5 425 aa12.33□□□□□ -0.44
LMNA-201ENST00000347559 ABHD17AQ96GS6 310 aa12.33□□□□□ -0.44
LMNA-201ENST00000347559 SH3BGRL2Q9UJC5 107 aa12.33□□□□□ -0.44
LMNA-201ENST00000347559 MED13Q9UHV7 2174 aa12.32□□□□□ -0.44
LMNA-201ENST00000347559 APELAP0DMC3 54 aa12.32□□□□□ -0.44
LMNA-201ENST00000347559 FXYD2P54710 66 aa12.32□□□□□ -0.44
LMNA-201ENST00000347559 WFDC2Q14508 124 aa12.32□□□□□ -0.44
LMNA-201ENST00000347559 INO80CQ6PI98 192 aaPredicted RBP12.32□□□□□ -0.44
LMNA-201ENST00000347559 GOLT1AQ6ZVE7 132 aa12.32□□□□□ -0.44
LMNA-201ENST00000347559 BCL6BQ8N143 479 aaPredicted RBP12.32□□□□□ -0.44
LMNA-201ENST00000347559 OR5AN1Q8NGI8 311 aa12.32□□□□□ -0.44
LMNA-201ENST00000347559 HARBI1Q96MB7 349 aa12.32□□□□□ -0.44
LMNA-201ENST00000347559 COL25A1Q9BXS0 654 aaPredicted RBP12.32□□□□□ -0.44
LMNA-201ENST00000347559 CT45A6P0DMU7 189 aa12.32□□□□□ -0.44
LMNA-201ENST00000347559 CT45A5P0DMU8 189 aa12.32□□□□□ -0.44
LMNA-201ENST00000347559 CT45A7P0DMV0 189 aa12.32□□□□□ -0.44
LMNA-201ENST00000347559 ZNF414Q96IQ9 312 aa12.32□□□□□ -0.44
LMNA-201ENST00000347559 GFRA4Q9GZZ7 299 aa12.32□□□□□ -0.44
LMNA-201ENST00000347559 SSUH2Q9Y2M2 353 aa12.32□□□□□ -0.44
LMNA-201ENST00000347559 FTH1P19P0C7X4 201 aa12.31□□□□□ -0.44
LMNA-201ENST00000347559 CEACAM3P40198 252 aa12.31□□□□□ -0.44
LMNA-201ENST00000347559 CD300EQ496F6 205 aaPredicted RBP12.31□□□□□ -0.44
LMNA-201ENST00000347559 SPRNQ5BIV9 151 aa12.31□□□□□ -0.44
LMNA-201ENST00000347559 PEAR1Q5VY43 1037 aaPredicted RBP12.31□□□□□ -0.44
LMNA-201ENST00000347559 CNEP1R1Q8N9A8 125 aa12.31□□□□□ -0.44
LMNA-201ENST00000347559 ZNF492Q9P255 531 aa12.31□□□□□ -0.44
LMNA-201ENST00000347559 A0A096LNJ9 63 aa12.31□□□□□ -0.44
LMNA-201ENST00000347559 CKS1BP61024 79 aa12.31□□□□□ -0.44
LMNA-201ENST00000347559 SH2D6Q7Z4S9 175 aa12.31□□□□□ -0.44
LMNA-201ENST00000347559 IGKV1D-37A0A075B6S9 117 aa12.31□□□□□ -0.44
LMNA-201ENST00000347559 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.31□□□□□ -0.44
LMNA-201ENST00000347559 RIGQ13278 110 aa12.31□□□□□ -0.44
LMNA-201ENST00000347559 MOGAT3Q86VF5 341 aa12.31□□□□□ -0.44
LMNA-201ENST00000347559 RPRMLQ8N4K4 120 aa12.31□□□□□ -0.44
LMNA-201ENST00000347559 GCSAMQ8N6F7 178 aa12.31□□□□□ -0.44
LMNA-201ENST00000347559 C18orf15Q96N68 181 aa12.31□□□□□ -0.44
LMNA-201ENST00000347559 NHP2Q9NX24 153 aaKnown RBP12.31□□□□□ -0.44
LMNA-201ENST00000347559 D6R8Y8 96 aa12.3□□□□□ -0.44
LMNA-201ENST00000347559 FSTL3O95633 263 aa12.3□□□□□ -0.44
LMNA-201ENST00000347559 MEOX1P50221 254 aa12.3□□□□□ -0.44
LMNA-201ENST00000347559 SCGB2A2Q13296 93 aa12.3□□□□□ -0.44
LMNA-201ENST00000347559 POU2AF1Q16633 256 aa12.3□□□□□ -0.44
LMNA-201ENST00000347559 EXOC3-AS1Q8N2X6 119 aa12.3□□□□□ -0.44
LMNA-201ENST00000347559 TMSB15BA0A087X1C1 80 aa12.3□□□□□ -0.44
LMNA-201ENST00000347559 KBTBD11-OT1A0A1B0GTJ5 212 aa12.3□□□□□ -0.44
LMNA-201ENST00000347559 WT1-ASQ06250 92 aa12.3□□□□□ -0.44
LMNA-201ENST00000347559 ETDBQ3ZM63 59 aa12.3□□□□□ -0.44
LMNA-201ENST00000347559 RUSC1-AS1Q66K80 236 aa12.3□□□□□ -0.44
LMNA-201ENST00000347559 VGLL1Q99990 258 aa12.3□□□□□ -0.44
LMNA-201ENST00000347559 SIGLEC8Q9NYZ4 499 aa12.3□□□□□ -0.44
LMNA-201ENST00000347559 DKK2Q9UBU2 259 aa12.3□□□□□ -0.44
LMNA-201ENST00000347559 SRRM5B3KS81 715 aa12.29□□□□□ -0.44
LMNA-201ENST00000347559 HCP5Q6MZN7 132 aa12.29□□□□□ -0.44
LMNA-201ENST00000347559 CCDC144NLQ6NUI1 221 aa12.29□□□□□ -0.44
LMNA-201ENST00000347559 Q86TA4 180 aa12.29□□□□□ -0.44
LMNA-201ENST00000347559 TRAV26-1A0A087WT03 109 aa12.29□□□□□ -0.44
LMNA-201ENST00000347559 STXBP6Q8NFX7 210 aa12.29□□□□□ -0.44
LMNA-201ENST00000347559 SCGB1A1P11684 91 aa12.28□□□□□ -0.44
LMNA-201ENST00000347559 LGALS9BQ3B8N2 356 aa12.28□□□□□ -0.44
LMNA-201ENST00000347559 LGALS9CQ6DKI2 356 aa12.28□□□□□ -0.44
LMNA-201ENST00000347559 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.28□□□□□ -0.44
LMNA-201ENST00000347559 NDUFA4L2Q9NRX3 87 aa12.28□□□□□ -0.44
LMNA-201ENST00000347559 J3QR89 54 aa12.28□□□□□ -0.44
LMNA-201ENST00000347559 ARPC1AQ92747 370 aa12.28□□□□□ -0.44
LMNA-201ENST00000347559 SMPXQ9UHP9 88 aa12.28□□□□□ -0.44
LMNA-201ENST00000347559 SLC25A48Q6ZT89 311 aaKnown RBP12.28□□□□□ -0.44
LMNA-201ENST00000347559 DPF1Q92782 380 aa12.28□□□□□ -0.44
LMNA-201ENST00000347559 IFI27L1Q96BM0 104 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 197.4 ms