RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 A0A1B0GUS0 222 aa12.52□□□□□ -0.41
CCDC144A-202ENST00000340621 SMIM27A0A1W2PRY6 76 aa12.52□□□□□ -0.41
CCDC144A-202ENST00000340621 ZNF705GA8MUZ8 300 aaPredicted RBP12.52□□□□□ -0.41
CCDC144A-202ENST00000340621 SAA4P35542 130 aa12.52□□□□□ -0.41
CCDC144A-202ENST00000340621 Q8N9W7 124 aa12.52□□□□□ -0.41
CCDC144A-202ENST00000340621 MRPL18Q9H0U6 180 aaKnown RBP12.52□□□□□ -0.41
CCDC144A-202ENST00000340621 TMEM14CQ9P0S9 112 aa12.52□□□□□ -0.41
CCDC144A-202ENST00000340621 IGHV7-81A0A0B4J1V7 117 aa12.51□□□□□ -0.41
CCDC144A-202ENST00000340621 UBE2G1P62253 170 aa12.51□□□□□ -0.41
CCDC144A-202ENST00000340621 TOMM40O96008 361 aa12.5□□□□□ -0.41
CCDC144A-202ENST00000340621 IL4P05112 153 aa12.5□□□□□ -0.41
CCDC144A-202ENST00000340621 HIST1H1EP10412 219 aaKnown RBP12.5□□□□□ -0.41
CCDC144A-202ENST00000340621 BCL6BQ8N143 479 aaPredicted RBP12.5□□□□□ -0.41
CCDC144A-202ENST00000340621 TMEM256Q8N2U0 113 aa12.5□□□□□ -0.41
CCDC144A-202ENST00000340621 C5orf17Q8NAS9 161 aa12.5□□□□□ -0.41
CCDC144A-202ENST00000340621 NUDT10Q8NFP7 164 aa12.5□□□□□ -0.41
CCDC144A-202ENST00000340621 NUDT11Q96G61 164 aa12.5□□□□□ -0.41
CCDC144A-202ENST00000340621 ATG101Q9BSB4 218 aa12.5□□□□□ -0.41
CCDC144A-202ENST00000340621 SHANK2-AS3Q9BTD1 123 aa12.5□□□□□ -0.41
CCDC144A-202ENST00000340621 F8W735 103 aaPredicted RBP12.5□□□□□ -0.41
CCDC144A-202ENST00000340621 GNG7O60262 68 aa12.5□□□□□ -0.41
CCDC144A-202ENST00000340621 NDUFB8O95169 186 aa12.5□□□□□ -0.41
CCDC144A-202ENST00000340621 MFAP4P55083 255 aa12.5□□□□□ -0.41
CCDC144A-202ENST00000340621 PRR27Q6MZM9 219 aa12.5□□□□□ -0.41
CCDC144A-202ENST00000340621 PIP4P2Q8N4L2 257 aa12.5□□□□□ -0.41
CCDC144A-202ENST00000340621 RNF125Q96EQ8 232 aa12.5□□□□□ -0.41
CCDC144A-202ENST00000340621 TMEM68Q96MH6 324 aa12.5□□□□□ -0.41
CCDC144A-202ENST00000340621 WI2-2373I1.2A0A1W2PRP0 233 aa12.49□□□□□ -0.41
CCDC144A-202ENST00000340621 GRIFINA4D1Z8 144 aa12.49□□□□□ -0.41
CCDC144A-202ENST00000340621 TMEM8BA6NDV4 472 aa12.49□□□□□ -0.41
CCDC144A-202ENST00000340621 SNURFLB1AK76 121 aa12.49□□□□□ -0.41
CCDC144A-202ENST00000340621 NUPR1O60356 82 aa12.49□□□□□ -0.41
CCDC144A-202ENST00000340621 IGHV3-23P01764 117 aa12.49□□□□□ -0.41
CCDC144A-202ENST00000340621 TCRAP04437 139 aa12.49□□□□□ -0.41
CCDC144A-202ENST00000340621 FAM231DQ6ZW35 169 aa12.49□□□□□ -0.41
CCDC144A-202ENST00000340621 EXOC3-AS1Q8N2X6 119 aa12.49□□□□□ -0.41
CCDC144A-202ENST00000340621 C17orf77Q96MU5 243 aa12.49□□□□□ -0.41
CCDC144A-202ENST00000340621 GPR82Q96P67 336 aa12.49□□□□□ -0.41
CCDC144A-202ENST00000340621 GNB1LQ9BYB4 327 aa12.49□□□□□ -0.41
CCDC144A-202ENST00000340621 C7orf69Q9H7B7 122 aa12.49□□□□□ -0.41
CCDC144A-202ENST00000340621 FLNCQ14315 2725 aa12.49□□□□□ -0.41
CCDC144A-202ENST00000340621 LINC00587B1AMM8 73 aa12.49□□□□□ -0.41
CCDC144A-202ENST00000340621 MBD6Q96DN6 1003 aa12.49□□□□□ -0.41
CCDC144A-202ENST00000340621 HSPB9Q9BQS6 159 aa12.49□□□□□ -0.41
CCDC144A-202ENST00000340621 TRAV30A0A087WSZ9 112 aa12.48□□□□□ -0.41
CCDC144A-202ENST00000340621 H3BRN7 92 aa12.48□□□□□ -0.41
CCDC144A-202ENST00000340621 GATCO43716 136 aaKnown RBP12.48□□□□□ -0.41
CCDC144A-202ENST00000340621 OR2J3O76001 311 aa12.48□□□□□ -0.41
CCDC144A-202ENST00000340621 FCGR2BP31994 310 aaPredicted RBP12.48□□□□□ -0.41
CCDC144A-202ENST00000340621 GBGT1Q8N5D6 347 aa12.48□□□□□ -0.41
CCDC144A-202ENST00000340621 MLST8Q9BVC4 326 aa12.48□□□□□ -0.41
CCDC144A-202ENST00000340621 OTORQ9NRC9 128 aa12.48□□□□□ -0.41
CCDC144A-202ENST00000340621 C21orf62Q9NYP8 219 aa12.48□□□□□ -0.41
CCDC144A-202ENST00000340621 C1RLQ9NZP8 487 aa12.48□□□□□ -0.41
CCDC144A-202ENST00000340621 CENPVL3A0A0U1RRI6 287 aa12.47□□□□□ -0.41
CCDC144A-202ENST00000340621 NPFFO15130 113 aa12.47□□□□□ -0.41
CCDC144A-202ENST00000340621 BRS3P32247 399 aa12.47□□□□□ -0.41
CCDC144A-202ENST00000340621 USF2Q15853 346 aaPredicted RBP12.47□□□□□ -0.41
CCDC144A-202ENST00000340621 Q56UQ5 140 aa12.47□□□□□ -0.41
CCDC144A-202ENST00000340621 MRPL54Q6P161 138 aaKnown RBP12.47□□□□□ -0.41
CCDC144A-202ENST00000340621 BPIFA4PQ86YQ2 179 aa12.47□□□□□ -0.41
CCDC144A-202ENST00000340621 ZNF48Q96MX3 618 aaPredicted RBP12.47□□□□□ -0.41
CCDC144A-202ENST00000340621 TRBV19A0A075B6N1 114 aa12.47□□□□□ -0.41
CCDC144A-202ENST00000340621 HLA-DRB1P01911 266 aa12.47□□□□□ -0.41
CCDC144A-202ENST00000340621 TMEM136Q6ZRR5 245 aa12.47□□□□□ -0.41
CCDC144A-202ENST00000340621 FMC1Q96HJ9 113 aa12.47□□□□□ -0.41
CCDC144A-202ENST00000340621 THYN1Q9P016 225 aa12.47□□□□□ -0.41
CCDC144A-202ENST00000340621 CELSR1Q9NYQ6 3014 aa12.47□□□□□ -0.41
CCDC144A-202ENST00000340621 TRBV9A0A0B4J1U6 114 aa12.46□□□□□ -0.41
CCDC144A-202ENST00000340621 IZUMO1RA6ND01 250 aa12.46□□□□□ -0.41
CCDC144A-202ENST00000340621 LTAP01374 205 aa12.46□□□□□ -0.41
CCDC144A-202ENST00000340621 LINC00322Q6ZN03 302 aaPredicted RBP12.46□□□□□ -0.41
CCDC144A-202ENST00000340621 TMEM18Q96B42 140 aa12.46□□□□□ -0.41
CCDC144A-202ENST00000340621 GRAMD2BQ96HH9 432 aa12.46□□□□□ -0.41
CCDC144A-202ENST00000340621 NAT8BQ9UHF3 227 aa12.46□□□□□ -0.41
CCDC144A-202ENST00000340621 TP53TG3Q9ULZ0 132 aa12.46□□□□□ -0.41
CCDC144A-202ENST00000340621 ZFHX3Q15911 3703 aa12.46□□□□□ -0.41
CCDC144A-202ENST00000340621 TRAV8-1A0A0A6YYK1 113 aa12.46□□□□□ -0.42
CCDC144A-202ENST00000340621 OR2T8A6NH00 312 aa12.46□□□□□ -0.42
CCDC144A-202ENST00000340621 IGLC2P0DOY2 106 aa12.46□□□□□ -0.42
CCDC144A-202ENST00000340621 CRISP2P16562 243 aa12.46□□□□□ -0.42
CCDC144A-202ENST00000340621 RPL19P84098 196 aaKnown RBP12.46□□□□□ -0.42
CCDC144A-202ENST00000340621 JOSD1Q15040 202 aaPredicted RBP12.46□□□□□ -0.42
CCDC144A-202ENST00000340621 CCL19Q99731 98 aa12.46□□□□□ -0.42
CCDC144A-202ENST00000340621 POLR3KQ9Y2Y1 108 aaPredicted RBP12.46□□□□□ -0.42
CCDC144A-202ENST00000340621 IGHV4-61A0A0C4DH41 118 aa12.45□□□□□ -0.42
CCDC144A-202ENST00000340621 MRPS12O15235 138 aaKnown RBP12.45□□□□□ -0.42
CCDC144A-202ENST00000340621 RNF224P0DH78 156 aa12.45□□□□□ -0.42
CCDC144A-202ENST00000340621 GZMBP10144 247 aa12.45□□□□□ -0.42
CCDC144A-202ENST00000340621 RAB4BP61018 213 aa12.45□□□□□ -0.42
CCDC144A-202ENST00000340621 PAX8Q06710 450 aa12.45□□□□□ -0.42
CCDC144A-202ENST00000340621 OR4F17Q8NGA8 305 aa12.45□□□□□ -0.42
CCDC144A-202ENST00000340621 SMIM12Q96EX1 92 aa12.45□□□□□ -0.42
CCDC144A-202ENST00000340621 TMUB1Q9BVT8 246 aa12.45□□□□□ -0.42
CCDC144A-202ENST00000340621 PRDM13Q9H4Q3 707 aa12.45□□□□□ -0.42
CCDC144A-202ENST00000340621 FBXL7Q9UJT9 491 aa12.45□□□□□ -0.42
CCDC144A-202ENST00000340621 IGHV3OR16-10A0A075B7F0 116 aa12.45□□□□□ -0.42
CCDC144A-202ENST00000340621 LINC01548A6NM66 108 aa12.45□□□□□ -0.42
CCDC144A-202ENST00000340621 CTSGP08311 255 aa12.45□□□□□ -0.42
CCDC144A-202ENST00000340621 WDR73Q6P4I2 378 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms