RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 ZNF506Q5JVG8 444 aa11.38□□□□□ -0.59
CBX3-201ENST00000337620 ZNF600Q6ZNG1 722 aa11.38□□□□□ -0.59
CBX3-201ENST00000337620 OR4X2Q8NGF9 303 aa11.38□□□□□ -0.59
CBX3-201ENST00000337620 MRPL27Q9P0M9 148 aaKnown RBP11.38□□□□□ -0.59
CBX3-201ENST00000337620 IGHV3OR16-8A0A075B7F1 116 aa11.37□□□□□ -0.59
CBX3-201ENST00000337620 TMEM89A2RUT3 159 aa11.37□□□□□ -0.59
CBX3-201ENST00000337620 ARL3P36405 182 aa11.37□□□□□ -0.59
CBX3-201ENST00000337620 USF2Q15853 346 aaPredicted RBP11.37□□□□□ -0.59
CBX3-201ENST00000337620 LEMD1Q68G75 181 aa11.37□□□□□ -0.59
CBX3-201ENST00000337620 PQLC2Q6ZP29 291 aa11.37□□□□□ -0.59
CBX3-201ENST00000337620 FAM167A-AS1Q96KT0 104 aa11.37□□□□□ -0.59
CBX3-201ENST00000337620 OR5B12Q96R08 314 aa11.37□□□□□ -0.59
CBX3-201ENST00000337620 SLC25A39Q9BZJ4 359 aaPredicted RBP11.37□□□□□ -0.59
CBX3-201ENST00000337620 MANBALQ9NQG1 85 aa11.37□□□□□ -0.59
CBX3-201ENST00000337620 KRBOX1C9JBD0 128 aa11.36□□□□□ -0.59
CBX3-201ENST00000337620 PAGE4O60829 102 aa11.36□□□□□ -0.59
CBX3-201ENST00000337620 TRBV12-3P01733 135 aa11.36□□□□□ -0.59
CBX3-201ENST00000337620 RPLP1P05386 114 aaKnown RBP11.36□□□□□ -0.59
CBX3-201ENST00000337620 OR10J4P0C629 311 aa11.36□□□□□ -0.59
CBX3-201ENST00000337620 SFTA3P0C7M3 94 aa11.36□□□□□ -0.59
CBX3-201ENST00000337620 PMS2P11Q13670 270 aa11.36□□□□□ -0.59
CBX3-201ENST00000337620 ZNF503Q96F45 646 aa11.36□□□□□ -0.59
CBX3-201ENST00000337620 ATP6V0BQ99437 205 aa11.36□□□□□ -0.59
CBX3-201ENST00000337620 VAX2Q9UIW0 290 aa11.36□□□□□ -0.59
CBX3-201ENST00000337620 FOXE3Q13461 319 aa11.36□□□□□ -0.59
CBX3-201ENST00000337620 TOMM20LQ6UXN7 152 aa11.36□□□□□ -0.59
CBX3-201ENST00000337620 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.35□□□□□ -0.59
CBX3-201ENST00000337620 F8W036 122 aa11.35□□□□□ -0.59
CBX3-201ENST00000337620 ELANEP08246 267 aa11.35□□□□□ -0.59
CBX3-201ENST00000337620 PYYP10082 97 aa11.35□□□□□ -0.59
CBX3-201ENST00000337620 ZP3P21754 424 aa11.35□□□□□ -0.59
CBX3-201ENST00000337620 CEBPGP53567 150 aa11.35□□□□□ -0.59
CBX3-201ENST00000337620 RELQ04864 619 aaPredicted RBP11.35□□□□□ -0.59
CBX3-201ENST00000337620 KIAA0141Q14154 515 aaPredicted RBP11.35□□□□□ -0.59
CBX3-201ENST00000337620 CST9LP1Q5W188 147 aa11.35□□□□□ -0.59
CBX3-201ENST00000337620 ZNF343Q6P1L6 599 aa11.35□□□□□ -0.59
CBX3-201ENST00000337620 PAXXQ9BUH6 204 aa11.35□□□□□ -0.59
CBX3-201ENST00000337620 OR51M1Q9H341 326 aa11.35□□□□□ -0.59
CBX3-201ENST00000337620 SMDT1Q9H4I9 107 aa11.35□□□□□ -0.59
CBX3-201ENST00000337620 UBE2L3P68036 154 aaKnown RBP11.35□□□□□ -0.59
CBX3-201ENST00000337620 KLHDC1Q8N7A1 406 aa11.35□□□□□ -0.59
CBX3-201ENST00000337620 JMJD8Q96S16 334 aa11.35□□□□□ -0.59
CBX3-201ENST00000337620 SLC35B3Q9H1N7 401 aa11.35□□□□□ -0.59
CBX3-201ENST00000337620 TMEM167BQ9NRX6 74 aa11.35□□□□□ -0.59
CBX3-201ENST00000337620 BMPR1BO00238 502 aa11.34□□□□□ -0.59
CBX3-201ENST00000337620 HSPB1P04792 205 aaKnown RBP11.34□□□□□ -0.59
CBX3-201ENST00000337620 SNRPCP09234 159 aaKnown RBP11.34□□□□□ -0.59
CBX3-201ENST00000337620 MEF2BQ02080 365 aaPredicted RBP11.34□□□□□ -0.59
CBX3-201ENST00000337620 S100A7AQ86SG5 101 aa11.34□□□□□ -0.59
CBX3-201ENST00000337620 ZNF414Q96IQ9 312 aa11.34□□□□□ -0.59
CBX3-201ENST00000337620 RABAC1Q9UI14 185 aa11.34□□□□□ -0.59
CBX3-201ENST00000337620 NSD1Q96L73 2696 aaPredicted RBP11.34□□□□□ -0.59
CBX3-201ENST00000337620 SRP19P09132 144 aaKnown RBP11.33□□□□□ -0.6
CBX3-201ENST00000337620 ADCYAP1P18509 176 aa11.33□□□□□ -0.6
CBX3-201ENST00000337620 TAGLN2P37802 199 aaKnown RBP11.33□□□□□ -0.6
CBX3-201ENST00000337620 RPL15P61313 204 aaKnown RBP11.33□□□□□ -0.6
CBX3-201ENST00000337620 STXBP6Q8NFX7 210 aa11.33□□□□□ -0.6
CBX3-201ENST00000337620 SHANK2-AS3Q9BTD1 123 aa11.33□□□□□ -0.6
CBX3-201ENST00000337620 ZFAND3Q9H8U3 227 aa11.33□□□□□ -0.6
CBX3-201ENST00000337620 CYSRT1A8MQ03 144 aa11.33□□□□□ -0.6
CBX3-201ENST00000337620 C11orf94C9JXX5 98 aa11.33□□□□□ -0.6
CBX3-201ENST00000337620 H3BRN7 92 aa11.33□□□□□ -0.6
CBX3-201ENST00000337620 OR4F5Q8NH21 305 aa11.33□□□□□ -0.6
CBX3-201ENST00000337620 OR4F4Q96R69 305 aa11.33□□□□□ -0.6
CBX3-201ENST00000337620 PEF1Q9UBV8 284 aaKnown RBP11.33□□□□□ -0.6
CBX3-201ENST00000337620 YTHDF2Q9Y5A9 579 aaKnown RBP11.33□□□□□ -0.6
CBX3-201ENST00000337620 ZNF98A6NK75 572 aa11.32□□□□□ -0.6
CBX3-201ENST00000337620 APOC3P02656 99 aa11.32□□□□□ -0.6
CBX3-201ENST00000337620 ATP5G3P48201 142 aa11.32□□□□□ -0.6
CBX3-201ENST00000337620 CD81P60033 236 aa11.32□□□□□ -0.6
CBX3-201ENST00000337620 CYB561D1Q8N8Q1 229 aa11.32□□□□□ -0.6
CBX3-201ENST00000337620 C20orf24Q9BUV8 137 aa11.32□□□□□ -0.6
CBX3-201ENST00000337620 FAM74A7A6NL05 159 aa11.32□□□□□ -0.6
CBX3-201ENST00000337620 SMUG1Q53HV7 270 aa11.32□□□□□ -0.6
CBX3-201ENST00000337620 FXYD5Q96DB9 178 aa11.32□□□□□ -0.6
CBX3-201ENST00000337620 ZNF207O43670 478 aaKnown RBP11.31□□□□□ -0.6
CBX3-201ENST00000337620 GGCTO75223 188 aaKnown RBP11.31□□□□□ -0.6
CBX3-201ENST00000337620 CRLF1O75462 422 aa11.31□□□□□ -0.6
CBX3-201ENST00000337620 SOHLH1Q5JUK2 328 aa11.31□□□□□ -0.6
CBX3-201ENST00000337620 FAM209BQ5JX69 171 aa11.31□□□□□ -0.6
CBX3-201ENST00000337620 RNF152Q8N8N0 203 aa11.31□□□□□ -0.6
CBX3-201ENST00000337620 SUN5Q8TC36 379 aa11.31□□□□□ -0.6
CBX3-201ENST00000337620 BLNKQ8WV28 456 aa11.31□□□□□ -0.6
CBX3-201ENST00000337620 SEC11CQ9BY50 192 aa11.31□□□□□ -0.6
CBX3-201ENST00000337620 TCF21O43680 179 aa11.3□□□□□ -0.6
CBX3-201ENST00000337620 GP9P14770 177 aa11.3□□□□□ -0.6
CBX3-201ENST00000337620 BPIFA4PQ86YQ2 179 aa11.3□□□□□ -0.6
CBX3-201ENST00000337620 MYOZ3Q8TDC0 251 aa11.3□□□□□ -0.6
CBX3-201ENST00000337620 UBE2E2Q96LR5 201 aa11.3□□□□□ -0.6
CBX3-201ENST00000337620 FN1P02751 2386 aaKnown RBP11.3□□□□□ -0.6
CBX3-201ENST00000337620 ZNF320A2RRD8 509 aa11.3□□□□□ -0.6
CBX3-201ENST00000337620 NDUFA4O00483 81 aa11.3□□□□□ -0.6
CBX3-201ENST00000337620 LINC01006Q8NI28 216 aa11.3□□□□□ -0.6
CBX3-201ENST00000337620 F8P00451 2351 aa11.29□□□□□ -0.6
CBX3-201ENST00000337620 CLPSL1A2RUU4 121 aa11.29□□□□□ -0.6
CBX3-201ENST00000337620 H3BTX0 84 aa11.29□□□□□ -0.6
CBX3-201ENST00000337620 NBEAP1P0C6P0 100 aa11.29□□□□□ -0.6
CBX3-201ENST00000337620 NPPCP23582 126 aa11.29□□□□□ -0.6
CBX3-201ENST00000337620 S100A7P31151 101 aa11.29□□□□□ -0.6
CBX3-201ENST00000337620 SRSF2Q01130 221 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms