RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 NPFFR1Q9GZQ6 430 aa13.97□□□□□ -0.17
TRAPPC11-201ENST00000334690 WNT2P09544 360 aa13.97□□□□□ -0.17
TRAPPC11-201ENST00000334690 SCRT1Q9BWW7 348 aa13.97□□□□□ -0.17
TRAPPC11-201ENST00000334690 GTF3C1Q12789 2109 aa13.97□□□□□ -0.17
TRAPPC11-201ENST00000334690 CACNG7P62955 275 aa13.96□□□□□ -0.17
TRAPPC11-201ENST00000334690 LIME1Q9H400 295 aa13.96□□□□□ -0.17
TRAPPC11-201ENST00000334690 ST20Q9HBF5 79 aa13.96□□□□□ -0.17
TRAPPC11-201ENST00000334690 HAX1O00165 279 aa13.96□□□□□ -0.17
TRAPPC11-201ENST00000334690 IGLV3-1P01715 115 aa13.96□□□□□ -0.17
TRAPPC11-201ENST00000334690 RNASE4P34096 147 aaKnown RBP13.96□□□□□ -0.17
TRAPPC11-201ENST00000334690 PCP4P48539 62 aa13.96□□□□□ -0.17
TRAPPC11-201ENST00000334690 SUMO2P61956 95 aaKnown RBP13.96□□□□□ -0.17
TRAPPC11-201ENST00000334690 C5orf64Q2M2E5 130 aa13.96□□□□□ -0.17
TRAPPC11-201ENST00000334690 NCOR1P1Q9H4R4 102 aa13.96□□□□□ -0.17
TRAPPC11-201ENST00000334690 PAX8Q06710 450 aa13.96□□□□□ -0.18
TRAPPC11-201ENST00000334690 MOB4Q9Y3A3 225 aa13.96□□□□□ -0.18
TRAPPC11-201ENST00000334690 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC11-201ENST00000334690 EFNA4P52798 201 aa13.95□□□□□ -0.18
TRAPPC11-201ENST00000334690 OR4X2Q8NGF9 303 aa13.95□□□□□ -0.18
TRAPPC11-201ENST00000334690 TICRRQ7Z2Z1 1910 aa13.95□□□□□ -0.18
TRAPPC11-201ENST00000334690 NPIPB5A8MRT5 1133 aa13.95□□□□□ -0.18
TRAPPC11-201ENST00000334690 PAX9P55771 341 aa13.95□□□□□ -0.18
TRAPPC11-201ENST00000334690 SRSF1Q07955 248 aaKnown RBP eCLIP13.95□□□□□ -0.18
TRAPPC11-201ENST00000334690 C1orf194Q5T5A4 169 aa13.95□□□□□ -0.18
TRAPPC11-201ENST00000334690 EXOC3-AS1Q8N2X6 119 aa13.95□□□□□ -0.18
TRAPPC11-201ENST00000334690 MRPL16Q9NX20 251 aaKnown RBP13.95□□□□□ -0.18
TRAPPC11-201ENST00000334690 IGKV1-16P04430 117 aa13.95□□□□□ -0.18
TRAPPC11-201ENST00000334690 LINC01559Q495D7 138 aa13.95□□□□□ -0.18
TRAPPC11-201ENST00000334690 LYPD1Q8N2G4 141 aa13.95□□□□□ -0.18
TRAPPC11-201ENST00000334690 TMEM256Q8N2U0 113 aa13.95□□□□□ -0.18
TRAPPC11-201ENST00000334690 IFI27L1Q96BM0 104 aa13.95□□□□□ -0.18
TRAPPC11-201ENST00000334690 ERVK11-1P61568 191 aa13.95□□□□□ -0.18
TRAPPC11-201ENST00000334690 C15orf32Q32M92 178 aa13.95□□□□□ -0.18
TRAPPC11-201ENST00000334690 VMO1Q7Z5L0 202 aa13.95□□□□□ -0.18
TRAPPC11-201ENST00000334690 C5orf30Q96GV9 206 aa13.95□□□□□ -0.18
TRAPPC11-201ENST00000334690 PLXND1Q9Y4D7 1925 aa13.95□□□□□ -0.18
TRAPPC11-201ENST00000334690 M0R1W7 72 aa13.94□□□□□ -0.18
TRAPPC11-201ENST00000334690 ORMDL2Q53FV1 153 aa13.94□□□□□ -0.18
TRAPPC11-201ENST00000334690 BUB1B-PAK6H3BSN5 160 aa13.94□□□□□ -0.18
TRAPPC11-201ENST00000334690 OVOL1O14753 267 aa13.94□□□□□ -0.18
TRAPPC11-201ENST00000334690 ARL6IP6Q8N6S5 226 aa13.94□□□□□ -0.18
TRAPPC11-201ENST00000334690 MALRD1Q5VYJ5 2156 aa13.94□□□□□ -0.18
TRAPPC11-201ENST00000334690 DUSP14O95147 198 aaKnown RBP13.94□□□□□ -0.18
TRAPPC11-201ENST00000334690 DUX3Q96PT4 197 aa13.94□□□□□ -0.18
TRAPPC11-201ENST00000334690 DPM2O94777 84 aa13.93□□□□□ -0.18
TRAPPC11-201ENST00000334690 PRSS22Q9GZN4 317 aa13.93□□□□□ -0.18
TRAPPC11-201ENST00000334690 SRSF6Q13247 344 aaKnown RBP13.93□□□□□ -0.18
TRAPPC11-201ENST00000334690 BEND2Q8NDZ0 799 aa13.93□□□□□ -0.18
TRAPPC11-201ENST00000334690 GATA4P43694 442 aa13.93□□□□□ -0.18
TRAPPC11-201ENST00000334690 SRSF8Q9BRL6 282 aaKnown RBP13.93□□□□□ -0.18
TRAPPC11-201ENST00000334690 MS4A6AQ9H2W1 248 aa13.93□□□□□ -0.18
TRAPPC11-201ENST00000334690 SPCS1Q9Y6A9 102 aa13.93□□□□□ -0.18
TRAPPC11-201ENST00000334690 TRAV41A0A0B4J266 112 aa13.93□□□□□ -0.18
TRAPPC11-201ENST00000334690 FAM181BA6NEQ2 426 aa13.93□□□□□ -0.18
TRAPPC11-201ENST00000334690 LINC01549A6NIU2 74 aa13.93□□□□□ -0.18
TRAPPC11-201ENST00000334690 CD7P09564 240 aa13.93□□□□□ -0.18
TRAPPC11-201ENST00000334690 FBLN7Q53RD9 439 aa13.92□□□□□ -0.18
TRAPPC11-201ENST00000334690 C2orf88Q9BSF0 95 aa13.92□□□□□ -0.18
TRAPPC11-201ENST00000334690 MRPL27Q9P0M9 148 aaKnown RBP13.92□□□□□ -0.18
TRAPPC11-201ENST00000334690 CYSLTR1Q9Y271 337 aa13.92□□□□□ -0.18
TRAPPC11-201ENST00000334690 C3orf36Q3SXR2 165 aa13.92□□□□□ -0.18
TRAPPC11-201ENST00000334690 TMEM14BQ9NUH8 114 aa13.92□□□□□ -0.18
TRAPPC11-201ENST00000334690 PEMTQ9UBM1 199 aa13.92□□□□□ -0.18
TRAPPC11-201ENST00000334690 PPIFP30405 207 aaKnown RBP13.91□□□□□ -0.18
TRAPPC11-201ENST00000334690 NUP35Q8NFH5 326 aa13.91□□□□□ -0.18
TRAPPC11-201ENST00000334690 TANC1Q9C0D5 1861 aa13.91□□□□□ -0.18
TRAPPC11-201ENST00000334690 TRAV40A0A0B4J280 105 aa13.91□□□□□ -0.18
TRAPPC11-201ENST00000334690 PSMB11A5LHX3 300 aa13.91□□□□□ -0.18
TRAPPC11-201ENST00000334690 ITLN2Q8WWU7 325 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC11-201ENST00000334690 MRPS16Q9Y3D3 137 aaKnown RBP13.91□□□□□ -0.18
TRAPPC11-201ENST00000334690 PFN1P07737 140 aaKnown RBP13.91□□□□□ -0.18
TRAPPC11-201ENST00000334690 GZMBP10144 247 aa13.91□□□□□ -0.18
TRAPPC11-201ENST00000334690 IL15RAQ13261 267 aa13.91□□□□□ -0.18
TRAPPC11-201ENST00000334690 CFHR2P36980 270 aa13.91□□□□□ -0.18
TRAPPC11-201ENST00000334690 MRAP2Q96G30 205 aa13.91□□□□□ -0.18
TRAPPC11-201ENST00000334690 NDUFA3O95167 84 aa13.9□□□□□ -0.18
TRAPPC11-201ENST00000334690 KLF17Q5JT82 389 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC11-201ENST00000334690 YLPM1P49750 1951 aaKnown RBP13.9□□□□□ -0.18
TRAPPC11-201ENST00000334690 WIPF3A6NGB9 483 aa13.9□□□□□ -0.18
TRAPPC11-201ENST00000334690 IGKV1-39P01597 117 aa13.9□□□□□ -0.18
TRAPPC11-201ENST00000334690 IGKV1D-39P04432 117 aa13.9□□□□□ -0.18
TRAPPC11-201ENST00000334690 SIGLEC15Q6ZMC9 328 aa13.9□□□□□ -0.18
TRAPPC11-201ENST00000334690 Q6ZR03 302 aa13.9□□□□□ -0.18
TRAPPC11-201ENST00000334690 H3BRM9 83 aa13.9□□□□□ -0.18
TRAPPC11-201ENST00000334690 Q8NFD4 153 aa13.9□□□□□ -0.18
TRAPPC11-201ENST00000334690 GLMPQ8WWB7 406 aa13.9□□□□□ -0.18
TRAPPC11-201ENST00000334690 SMPXQ9UHP9 88 aa13.9□□□□□ -0.18
TRAPPC11-201ENST00000334690 MLANAQ16655 118 aa13.9□□□□□ -0.19
TRAPPC11-201ENST00000334690 LYPD2Q6UXB3 125 aa13.9□□□□□ -0.19
TRAPPC11-201ENST00000334690 IGKV2-40A0A087WW87 121 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC11-201ENST00000334690 IGKV2D-40P01614 121 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC11-201ENST00000334690 C10orf91Q5T1B1 145 aa13.89□□□□□ -0.19
TRAPPC11-201ENST00000334690 TMEM101Q96IK0 257 aa13.89□□□□□ -0.19
TRAPPC11-201ENST00000334690 TOMM40O96008 361 aa13.89□□□□□ -0.19
TRAPPC11-201ENST00000334690 LHFPL4Q7Z7J7 247 aa13.89□□□□□ -0.19
TRAPPC11-201ENST00000334690 BEX4Q9NWD9 120 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC11-201ENST00000334690 PF4P02776 101 aa13.89□□□□□ -0.19
TRAPPC11-201ENST00000334690 PRTN3P24158 256 aa13.89□□□□□ -0.19
TRAPPC11-201ENST00000334690 RPL15P61313 204 aaKnown RBP13.89□□□□□ -0.19
TRAPPC11-201ENST00000334690 SEC11AP67812 179 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms