RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 LEPROTO15243 131 aa13.8□□□□□ -0.2
PDZD8-201ENST00000334464 NOTCH4Q99466 2003 aa13.8□□□□□ -0.2
PDZD8-201ENST00000334464 SPAG8Q99932 426 aaPredicted RBP13.8□□□□□ -0.2
PDZD8-201ENST00000334464 DPH3P1Q9H4G8 78 aa13.8□□□□□ -0.2
PDZD8-201ENST00000334464 ERG28Q9UKR5 140 aa13.8□□□□□ -0.2
PDZD8-201ENST00000334464 RIPPLY3P57055 190 aa13.8□□□□□ -0.2
PDZD8-201ENST00000334464 RPL36AP83881 106 aaKnown RBP13.8□□□□□ -0.2
PDZD8-201ENST00000334464 RPL36ALQ969Q0 106 aaKnown RBP13.8□□□□□ -0.2
PDZD8-201ENST00000334464 GAGE13Q4V321 117 aa13.79□□□□□ -0.2
PDZD8-201ENST00000334464 SIGMAR1Q99720 223 aa13.79□□□□□ -0.2
PDZD8-201ENST00000334464 S4R3C0 116 aa13.79□□□□□ -0.2
PDZD8-201ENST00000334464 HEPN1Q6WQI6 88 aa13.79□□□□□ -0.2
PDZD8-201ENST00000334464 C9orf139Q6ZV77 190 aa13.79□□□□□ -0.2
PDZD8-201ENST00000334464 LINC00477Q96M19 166 aa13.79□□□□□ -0.2
PDZD8-201ENST00000334464 DMRTA2Q96SC8 542 aa13.79□□□□□ -0.2
PDZD8-201ENST00000334464 COL4A5P29400 1685 aa13.79□□□□□ -0.2
PDZD8-201ENST00000334464 C1QCP02747 245 aa13.79□□□□□ -0.2
PDZD8-201ENST00000334464 MRPL52Q86TS9 123 aaKnown RBP13.79□□□□□ -0.2
PDZD8-201ENST00000334464 LY96Q9Y6Y9 160 aa13.79□□□□□ -0.2
PDZD8-201ENST00000334464 TEX43Q6ZNM6 134 aa13.79□□□□□ -0.2
PDZD8-201ENST00000334464 ORAOV1Q8WV07 137 aa13.79□□□□□ -0.2
PDZD8-201ENST00000334464 KIAA1549LQ6ZVL6 1849 aa13.79□□□□□ -0.2
PDZD8-201ENST00000334464 SRRM5B3KS81 715 aa13.78□□□□□ -0.2
PDZD8-201ENST00000334464 H3BUT2 72 aa13.78□□□□□ -0.2
PDZD8-201ENST00000334464 RAMP1O60894 148 aa13.78□□□□□ -0.2
PDZD8-201ENST00000334464 FOXL1Q12952 345 aa13.78□□□□□ -0.2
PDZD8-201ENST00000334464 CT83Q5H943 113 aa13.78□□□□□ -0.2
PDZD8-201ENST00000334464 EGR1P18146 543 aa13.78□□□□□ -0.2
PDZD8-201ENST00000334464 TOMM40O96008 361 aa13.78□□□□□ -0.2
PDZD8-201ENST00000334464 TEX38Q6PEX7 206 aa13.78□□□□□ -0.2
PDZD8-201ENST00000334464 C1QL4Q86Z23 238 aa13.78□□□□□ -0.2
PDZD8-201ENST00000334464 Q5BKY6 102 aa13.78□□□□□ -0.2
PDZD8-201ENST00000334464 RASL10AQ92737 203 aa13.78□□□□□ -0.2
PDZD8-201ENST00000334464 NAV3Q8IVL0 2385 aa13.78□□□□□ -0.2
PDZD8-201ENST00000334464 PDE6HQ13956 83 aa13.78□□□□□ -0.2
PDZD8-201ENST00000334464 ZFAND6Q6FIF0 208 aa13.78□□□□□ -0.2
PDZD8-201ENST00000334464 B4DSR2 109 aa13.78□□□□□ -0.2
PDZD8-201ENST00000334464 TIMM23O14925 209 aa13.78□□□□□ -0.2
PDZD8-201ENST00000334464 EFNA4P52798 201 aa13.78□□□□□ -0.2
PDZD8-201ENST00000334464 OR10W1Q8NGF6 305 aa13.78□□□□□ -0.2
PDZD8-201ENST00000334464 FNDC10F2Z333 226 aa13.77□□□□□ -0.2
PDZD8-201ENST00000334464 CTSBP07858 339 aa13.77□□□□□ -0.2
PDZD8-201ENST00000334464 HOXD3P31249 432 aaPredicted RBP13.77□□□□□ -0.2
PDZD8-201ENST00000334464 SPANXDQ9BXN6 97 aa13.77□□□□□ -0.2
PDZD8-201ENST00000334464 LINC00158P58513 81 aa13.77□□□□□ -0.2
PDZD8-201ENST00000334464 GNG5P63218 68 aa13.77□□□□□ -0.2
PDZD8-201ENST00000334464 TNFSF13O75888 250 aa13.77□□□□□ -0.2
PDZD8-201ENST00000334464 SAMD5Q5TGI4 173 aa13.77□□□□□ -0.2
PDZD8-201ENST00000334464 IGHV2-26A0A0B4J1V2 119 aa13.77□□□□□ -0.21
PDZD8-201ENST00000334464 VCYO14598 125 aa13.77□□□□□ -0.21
PDZD8-201ENST00000334464 ZNHIT1O43257 154 aa13.77□□□□□ -0.21
PDZD8-201ENST00000334464 TRAV2A0A0B4J234 112 aa13.77□□□□□ -0.21
PDZD8-201ENST00000334464 ERCC8Q13216 396 aa13.77□□□□□ -0.21
PDZD8-201ENST00000334464 MUC21Q5SSG8 566 aa13.76□□□□□ -0.21
PDZD8-201ENST00000334464 RNF222A6NCQ9 220 aa13.76□□□□□ -0.21
PDZD8-201ENST00000334464 ZNF479Q96JC4 524 aa13.76□□□□□ -0.21
PDZD8-201ENST00000334464 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.76□□□□□ -0.21
PDZD8-201ENST00000334464 HIST1H2BKO60814 126 aa13.76□□□□□ -0.21
PDZD8-201ENST00000334464 HIST1H2BJP06899 126 aa13.76□□□□□ -0.21
PDZD8-201ENST00000334464 HIST1H2BOP23527 126 aa13.76□□□□□ -0.21
PDZD8-201ENST00000334464 HIST1H2BBP33778 126 aa13.76□□□□□ -0.21
PDZD8-201ENST00000334464 HIST1H2BDP58876 126 aa13.76□□□□□ -0.21
PDZD8-201ENST00000334464 HIST1H2BCP62807 126 aa13.76□□□□□ -0.21
PDZD8-201ENST00000334464 HIST2H2BEQ16778 126 aa13.76□□□□□ -0.21
PDZD8-201ENST00000334464 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.76□□□□□ -0.21
PDZD8-201ENST00000334464 HIST1H2BHQ93079 126 aa13.76□□□□□ -0.21
PDZD8-201ENST00000334464 HIST1H2BNQ99877 126 aa13.76□□□□□ -0.21
PDZD8-201ENST00000334464 HIST1H2BMQ99879 126 aa13.76□□□□□ -0.21
PDZD8-201ENST00000334464 ZNF138P52744 262 aa13.76□□□□□ -0.21
PDZD8-201ENST00000334464 FBLN7Q53RD9 439 aa13.76□□□□□ -0.21
PDZD8-201ENST00000334464 TRAV40A0A0B4J280 105 aa13.76□□□□□ -0.21
PDZD8-201ENST00000334464 ADMP35318 185 aa13.76□□□□□ -0.21
PDZD8-201ENST00000334464 GATA3P23771 443 aa13.76□□□□□ -0.21
PDZD8-201ENST00000334464 SPRED2Q7Z698 418 aa13.76□□□□□ -0.21
PDZD8-201ENST00000334464 CUL9Q8IWT3 2517 aa13.76□□□□□ -0.21
PDZD8-201ENST00000334464 ID3Q02535 119 aa13.76□□□□□ -0.21
PDZD8-201ENST00000334464 KLF12Q9Y4X4 402 aa13.75□□□□□ -0.21
PDZD8-201ENST00000334464 HIVEP2P31629 2446 aa13.75□□□□□ -0.21
PDZD8-201ENST00000334464 SRSF4Q08170 494 aaKnown RBP13.75□□□□□ -0.21
PDZD8-201ENST00000334464 RCHY1Q96PM5 261 aa13.75□□□□□ -0.21
PDZD8-201ENST00000334464 DLX4Q92988 240 aaPredicted RBP13.75□□□□□ -0.21
PDZD8-201ENST00000334464 CCL3L1P16619 93 aa13.75□□□□□ -0.21
PDZD8-201ENST00000334464 RPUSD1Q9UJJ7 312 aaKnown RBP13.75□□□□□ -0.21
PDZD8-201ENST00000334464 MUC21A0A0G2JKD1 596 aa13.74□□□□□ -0.21
PDZD8-201ENST00000334464 MUC21A0A140T8X8 626 aa13.74□□□□□ -0.21
PDZD8-201ENST00000334464 UBE2CO00762 179 aa13.74□□□□□ -0.21
PDZD8-201ENST00000334464 VMO1Q7Z5L0 202 aa13.74□□□□□ -0.21
PDZD8-201ENST00000334464 ST6GALNAC6Q969X2 333 aa13.74□□□□□ -0.21
PDZD8-201ENST00000334464 RNF166Q96A37 237 aaPredicted RBP13.74□□□□□ -0.21
PDZD8-201ENST00000334464 GLMPQ8WWB7 406 aa13.74□□□□□ -0.21
PDZD8-201ENST00000334464 TRBV24-1A0A075B6N3 115 aa13.74□□□□□ -0.21
PDZD8-201ENST00000334464 SAP30O75446 220 aa13.74□□□□□ -0.21
PDZD8-201ENST00000334464 A0A1B0GWJ7 208 aa13.74□□□□□ -0.21
PDZD8-201ENST00000334464 RPRMLQ8N4K4 120 aa13.74□□□□□ -0.21
PDZD8-201ENST00000334464 SPACA3Q8IXA5 215 aa13.73□□□□□ -0.21
PDZD8-201ENST00000334464 ST6GALNAC3Q8NDV1 305 aa13.73□□□□□ -0.21
PDZD8-201ENST00000334464 CHAC1Q9BUX1 264 aa13.73□□□□□ -0.21
PDZD8-201ENST00000334464 PAX4O43316 350 aa13.73□□□□□ -0.21
PDZD8-201ENST00000334464 SNAI2O43623 268 aa13.73□□□□□ -0.21
PDZD8-201ENST00000334464 IGHV1-8P0DP01 117 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms