RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 SSBP2P81877 361 aaPredicted RBP4.98□□□□□ -1.61
PRKDC-201ENST00000314191 LINC00311Q8N616 119 aa4.98□□□□□ -1.61
PRKDC-201ENST00000314191 GSN-AS1Q9NRJ2 163 aa4.98□□□□□ -1.61
PRKDC-201ENST00000314191 MUC4Q99102 2169 aa4.98□□□□□ -1.61
PRKDC-201ENST00000314191 A0A1B0GV72 72 aa4.98□□□□□ -1.61
PRKDC-201ENST00000314191 PTTG1IPP53801 180 aa4.98□□□□□ -1.61
PRKDC-201ENST00000314191 HIST3H2BBQ8N257 126 aa4.98□□□□□ -1.61
PRKDC-201ENST00000314191 TMEM116Q8NCL8 245 aa4.98□□□□□ -1.61
PRKDC-201ENST00000314191 TRAV9-1A0A075B6T8 112 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 PYY3Q5JQD4 70 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 RUSC1-AS1Q66K80 236 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 TMEM136Q6ZRR5 245 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 TMEM256Q8N2U0 113 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 DDB2Q92466 427 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 PRR20EP86478 221 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 PRR20CP86479 221 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 PRR20DP86480 221 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 PRR20BP86481 221 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 PRR20AP86496 221 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 TMEM208Q9BTX3 173 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 TRBV9A0A0B4J1U6 114 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 HINT1P49773 126 aaPredicted RBP4.97□□□□□ -1.61
PRKDC-201ENST00000314191 MINOS1Q5TGZ0 78 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 Q8NA96 180 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 C11orf1Q9H5F2 150 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 MINOS1-NBL1R4GNA1 71 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 ASPHD1Q5U4P2 390 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 KAAG1Q9UBP8 84 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 CDC42EP3Q9UKI2 254 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 TRAV41A0A0B4J266 112 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 IFITM10A6NMD0 228 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 HIGD1CA8MV81 97 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 GPX1P07203 203 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 ZNF841Q6ZN19 808 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 OOSP1A8MZH6 123 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 FNDC10F2Z333 226 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 FNDC4Q9H6D8 234 aaPredicted RBP4.97□□□□□ -1.61
PRKDC-201ENST00000314191 CD33P20138 364 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 FOXL1Q12952 345 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 SPATA45Q537H7 98 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 FAM71F2Q6NXP2 309 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 IGHV2-70P01814 119 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 TM4SF20Q53R12 229 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 WFDC12Q8WWY7 111 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 PMCHL2Q9BQD1 86 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 NDUFB8O95169 186 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 LYRM7Q5U5X0 104 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 H3BUX3 64 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 NDPQ00604 133 aa4.97□□□□□ -1.61
PRKDC-201ENST00000314191 GPR179Q6PRD1 2367 aa4.96□□□□□ -1.61
PRKDC-201ENST00000314191 RBPMS2Q6ZRY4 209 aaKnown RBP4.96□□□□□ -1.61
PRKDC-201ENST00000314191 MAPK1IP1LQ8NDC0 245 aa4.96□□□□□ -1.61
PRKDC-201ENST00000314191 A0A1B0GUT8 65 aa4.96□□□□□ -1.61
PRKDC-201ENST00000314191 K7ERU9 68 aa4.96□□□□□ -1.61
PRKDC-201ENST00000314191 HAX1O00165 279 aa4.96□□□□□ -1.61
PRKDC-201ENST00000314191 ZNF562Q6V9R5 426 aa4.96□□□□□ -1.61
PRKDC-201ENST00000314191 NPIPB5A8MRT5 1133 aa4.96□□□□□ -1.62
PRKDC-201ENST00000314191 FBLN7Q53RD9 439 aa4.96□□□□□ -1.62
PRKDC-201ENST00000314191 TRGV9Q99603 122 aa4.96□□□□□ -1.62
PRKDC-201ENST00000314191 TRBV20OR9-2A0A075B6H5 130 aa4.96□□□□□ -1.62
PRKDC-201ENST00000314191 AMBPP02760 352 aa4.96□□□□□ -1.62
PRKDC-201ENST00000314191 C15orf32Q32M92 178 aa4.96□□□□□ -1.62
PRKDC-201ENST00000314191 ZNF329Q86UD4 541 aa4.96□□□□□ -1.62
PRKDC-201ENST00000314191 GLMPQ8WWB7 406 aa4.96□□□□□ -1.62
PRKDC-201ENST00000314191 RITA1Q96K30 269 aa4.96□□□□□ -1.62
PRKDC-201ENST00000314191 PRELID3AQ96N28 172 aa4.96□□□□□ -1.62
PRKDC-201ENST00000314191 FAM208BQ5VWN6 2430 aa4.96□□□□□ -1.62
PRKDC-201ENST00000314191 GGTLC3B5MD39 225 aa4.96□□□□□ -1.62
PRKDC-201ENST00000314191 TCAPO15273 167 aa4.96□□□□□ -1.62
PRKDC-201ENST00000314191 RPS20P60866 119 aaKnown RBP4.96□□□□□ -1.62
PRKDC-201ENST00000314191 C1orf229Q6ZS94 237 aaPredicted RBP4.96□□□□□ -1.62
PRKDC-201ENST00000314191 FER1L6-AS1Q8NA97 138 aa4.96□□□□□ -1.62
PRKDC-201ENST00000314191 KCNS1Q96KK3 526 aa4.96□□□□□ -1.62
PRKDC-201ENST00000314191 IGHV3OR16-12A0A075B7B8 117 aa4.96□□□□□ -1.62
PRKDC-201ENST00000314191 EBLN2Q6P2I7 272 aa4.96□□□□□ -1.62
PRKDC-201ENST00000314191 C11orf44Q8N8P7 122 aa4.96□□□□□ -1.62
PRKDC-201ENST00000314191 DYNLRB2Q8TF09 96 aa4.96□□□□□ -1.62
PRKDC-201ENST00000314191 TSKUQ8WUA8 353 aa4.96□□□□□ -1.62
PRKDC-201ENST00000314191 MOB4Q9Y3A3 225 aa4.96□□□□□ -1.62
PRKDC-201ENST00000314191 GNB1LQ9BYB4 327 aa4.95□□□□□ -1.62
PRKDC-201ENST00000314191 MYOZ3Q8TDC0 251 aa4.95□□□□□ -1.62
PRKDC-201ENST00000314191 TICRRQ7Z2Z1 1910 aa4.95□□□□□ -1.62
PRKDC-201ENST00000314191 APOHP02749 345 aaPredicted RBP4.95□□□□□ -1.62
PRKDC-201ENST00000314191 ZNF295-AS1Q8N0V1 137 aa4.95□□□□□ -1.62
PRKDC-201ENST00000314191 GOLT1BQ9Y3E0 138 aa4.95□□□□□ -1.62
PRKDC-201ENST00000314191 MUC22E2RYF6 1773 aaPredicted RBP4.95□□□□□ -1.62
PRKDC-201ENST00000314191 VWC2Q2TAL6 325 aa4.95□□□□□ -1.62
PRKDC-201ENST00000314191 FAM159AQ6UWV7 190 aa4.95□□□□□ -1.62
PRKDC-201ENST00000314191 C18orf15Q96N68 181 aa4.95□□□□□ -1.62
PRKDC-201ENST00000314191 OTOGLQ3ZCN5 2332 aa4.95□□□□□ -1.62
PRKDC-201ENST00000314191 A6NNC1 897 aa4.95□□□□□ -1.62
PRKDC-201ENST00000314191 G3V318 75 aa4.95□□□□□ -1.62
PRKDC-201ENST00000314191 M0R381 172 aa4.95□□□□□ -1.62
PRKDC-201ENST00000314191 NMUP48645 174 aa4.95□□□□□ -1.62
PRKDC-201ENST00000314191 FAM120AOSQ5T036 256 aa4.95□□□□□ -1.62
PRKDC-201ENST00000314191 Q8TAT8 98 aa4.95□□□□□ -1.62
PRKDC-201ENST00000314191 CGB3P0DN86 165 aa4.95□□□□□ -1.62
PRKDC-201ENST00000314191 CGB7P0DN87 165 aa4.95□□□□□ -1.62
PRKDC-201ENST00000314191 UBE2E1P51965 193 aa4.95□□□□□ -1.62
PRKDC-201ENST00000314191 REC114Q7Z4M0 266 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 774.7 ms