RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 IGHV3-72A0A0B4J1Y9 119 aa11.79□□□□□ -0.52
COL6A2-202ENST00000310645 SLC25A17O43808 307 aa11.79□□□□□ -0.52
COL6A2-202ENST00000310645 MYCNOSP40205 109 aa11.79□□□□□ -0.52
COL6A2-202ENST00000310645 ATP5IP56385 69 aaPredicted RBP11.79□□□□□ -0.52
COL6A2-202ENST00000310645 RPS20P60866 119 aaKnown RBP11.79□□□□□ -0.52
COL6A2-202ENST00000310645 C5orf17Q8NAS9 161 aa11.79□□□□□ -0.52
COL6A2-202ENST00000310645 RNF7Q9UBF6 113 aa11.79□□□□□ -0.52
COL6A2-202ENST00000310645 C22orf46C9J442 243 aa11.79□□□□□ -0.52
COL6A2-202ENST00000310645 TMEM238C9JI98 176 aa11.79□□□□□ -0.52
COL6A2-202ENST00000310645 ENSAO43768 121 aaKnown RBP11.79□□□□□ -0.52
COL6A2-202ENST00000310645 ARMS2P0C7Q2 107 aa11.79□□□□□ -0.52
COL6A2-202ENST00000310645 FAM106CPP0CH98 169 aa11.79□□□□□ -0.52
COL6A2-202ENST00000310645 FAM106AQ4KMX7 169 aa11.79□□□□□ -0.52
COL6A2-202ENST00000310645 EXOC3-AS1Q8N2X6 119 aa11.79□□□□□ -0.52
COL6A2-202ENST00000310645 NDFIP1Q9BT67 221 aa11.79□□□□□ -0.52
COL6A2-202ENST00000310645 POLEQ07864 2286 aa11.79□□□□□ -0.52
COL6A2-202ENST00000310645 SERTM2A0A1B0GWG4 89 aa11.78□□□□□ -0.52
COL6A2-202ENST00000310645 FSTL3O95633 263 aa11.78□□□□□ -0.52
COL6A2-202ENST00000310645 SP9P0CG40 484 aa11.78□□□□□ -0.52
COL6A2-202ENST00000310645 TPSG1Q9NRR2 321 aa11.78□□□□□ -0.52
COL6A2-202ENST00000310645 C19orf71A6NCJ1 209 aa11.78□□□□□ -0.52
COL6A2-202ENST00000310645 TM4SF20Q53R12 229 aa11.78□□□□□ -0.52
COL6A2-202ENST00000310645 OSR1Q8TAX0 266 aaPredicted RBP11.78□□□□□ -0.52
COL6A2-202ENST00000310645 SMIM12Q96EX1 92 aa11.78□□□□□ -0.52
COL6A2-202ENST00000310645 CCL11P51671 97 aa11.77□□□□□ -0.52
COL6A2-202ENST00000310645 LINC01545Q5VT33 79 aa11.77□□□□□ -0.52
COL6A2-202ENST00000310645 GAFA1Q96PS6 74 aa11.77□□□□□ -0.52
COL6A2-202ENST00000310645 RABAC1Q9UI14 185 aa11.77□□□□□ -0.52
COL6A2-202ENST00000310645 KLF12Q9Y4X4 402 aa11.77□□□□□ -0.52
COL6A2-202ENST00000310645 TTC28Q96AY4 2481 aa11.77□□□□□ -0.52
COL6A2-202ENST00000310645 LTAP01374 205 aa11.77□□□□□ -0.53
COL6A2-202ENST00000310645 TNFAIP6P98066 277 aaPredicted RBP11.77□□□□□ -0.53
COL6A2-202ENST00000310645 GTF2H5Q6ZYL4 71 aa11.77□□□□□ -0.53
COL6A2-202ENST00000310645 STXBP6Q8NFX7 210 aa11.77□□□□□ -0.53
COL6A2-202ENST00000310645 OR10X1Q8NGY0 326 aa11.77□□□□□ -0.53
COL6A2-202ENST00000310645 FMC1Q96HJ9 113 aa11.77□□□□□ -0.53
COL6A2-202ENST00000310645 ZNF747Q9BV97 191 aa11.77□□□□□ -0.53
COL6A2-202ENST00000310645 THYN1Q9P016 225 aa11.77□□□□□ -0.53
COL6A2-202ENST00000310645 CFAP47Q6ZTR5 3102 aa11.77□□□□□ -0.53
COL6A2-202ENST00000310645 CGB1A6NKQ9 187 aa11.77□□□□□ -0.53
COL6A2-202ENST00000310645 LHBP01229 141 aa11.77□□□□□ -0.53
COL6A2-202ENST00000310645 IGLV1-44P01699 117 aa11.77□□□□□ -0.53
COL6A2-202ENST00000310645 PRSS57Q6UWY2 283 aa11.77□□□□□ -0.53
COL6A2-202ENST00000310645 JMJD8Q96S16 334 aa11.77□□□□□ -0.53
COL6A2-202ENST00000310645 SOX21Q9Y651 276 aaPredicted RBP11.77□□□□□ -0.53
COL6A2-202ENST00000310645 CFHR2P36980 270 aa11.76□□□□□ -0.53
COL6A2-202ENST00000310645 CSN1S1P47710 185 aa11.76□□□□□ -0.53
COL6A2-202ENST00000310645 LYZP61626 148 aa11.76□□□□□ -0.53
COL6A2-202ENST00000310645 SPTBN2O15020 2390 aa11.76□□□□□ -0.53
COL6A2-202ENST00000310645 TMSB15BA0A087X1C1 80 aa11.76□□□□□ -0.53
COL6A2-202ENST00000310645 LOXL1Q08397 574 aaPredicted RBP11.76□□□□□ -0.53
COL6A2-202ENST00000310645 PROCRQ9UNN8 238 aa11.76□□□□□ -0.53
COL6A2-202ENST00000310645 PCNX1Q96RV3 2341 aa11.76□□□□□ -0.53
COL6A2-202ENST00000310645 A0A1B0GUT8 65 aa11.76□□□□□ -0.53
COL6A2-202ENST00000310645 IFI27P40305 119 aaPredicted RBP11.76□□□□□ -0.53
COL6A2-202ENST00000310645 DHRS13Q6UX07 377 aa11.76□□□□□ -0.53
COL6A2-202ENST00000310645 WFDC3Q8IUB2 231 aa11.76□□□□□ -0.53
COL6A2-202ENST00000310645 ZCCHC24Q8N2G6 241 aaKnown RBP11.76□□□□□ -0.53
COL6A2-202ENST00000310645 F11RQ9Y624 299 aaKnown RBP11.76□□□□□ -0.53
COL6A2-202ENST00000310645 SMG1Q96Q15 3661 aaKnown RBP11.76□□□□□ -0.53
COL6A2-202ENST00000310645 A0A1W2PPI3 338 aa11.75□□□□□ -0.53
COL6A2-202ENST00000310645 CCL8P80075 99 aa11.75□□□□□ -0.53
COL6A2-202ENST00000310645 OR10AG1Q8NH19 301 aa11.75□□□□□ -0.53
COL6A2-202ENST00000310645 SEC11AP67812 179 aa11.75□□□□□ -0.53
COL6A2-202ENST00000310645 RITA1Q96K30 269 aa11.75□□□□□ -0.53
COL6A2-202ENST00000310645 ZNF71Q9NQZ8 489 aaPredicted RBP11.75□□□□□ -0.53
COL6A2-202ENST00000310645 NMUP48645 174 aa11.74□□□□□ -0.53
COL6A2-202ENST00000310645 PRB3Q04118 309 aaPredicted RBP11.74□□□□□ -0.53
COL6A2-202ENST00000310645 KIR3DS1Q14943 382 aa11.74□□□□□ -0.53
COL6A2-202ENST00000310645 CT83Q5H943 113 aa11.74□□□□□ -0.53
COL6A2-202ENST00000310645 OR4C13Q8NGP0 309 aa11.74□□□□□ -0.53
COL6A2-202ENST00000310645 A0A1W2PRD5 423 aa11.74□□□□□ -0.53
COL6A2-202ENST00000310645 A0A1W2PRF3 423 aa11.74□□□□□ -0.53
COL6A2-202ENST00000310645 A0A1W2PRM7 423 aa11.74□□□□□ -0.53
COL6A2-202ENST00000310645 Q86TA4 180 aa11.74□□□□□ -0.53
COL6A2-202ENST00000310645 C1orf162Q8NEQ5 155 aaPredicted RBP11.74□□□□□ -0.53
COL6A2-202ENST00000310645 ZNF492Q9P255 531 aa11.74□□□□□ -0.53
COL6A2-202ENST00000310645 A0A0G2JLM5 398 aa11.74□□□□□ -0.53
COL6A2-202ENST00000310645 A6NDN8 102 aa11.74□□□□□ -0.53
COL6A2-202ENST00000310645 CACNG7P62955 275 aa11.74□□□□□ -0.53
COL6A2-202ENST00000310645 OR2K2Q8NGT1 345 aa11.74□□□□□ -0.53
COL6A2-202ENST00000310645 SLC25A15Q9Y619 301 aa11.74□□□□□ -0.53
COL6A2-202ENST00000310645 GOSR1O95249 250 aa11.73□□□□□ -0.53
COL6A2-202ENST00000310645 THAP8Q8NA92 274 aa11.73□□□□□ -0.53
COL6A2-202ENST00000310645 C9orf118A6NHY6 69 aa11.73□□□□□ -0.53
COL6A2-202ENST00000310645 HAX1O00165 279 aa11.73□□□□□ -0.53
COL6A2-202ENST00000310645 RPL24P83731 157 aaKnown RBP11.73□□□□□ -0.53
COL6A2-202ENST00000310645 ZNF833PQ6ZTB9 187 aa11.73□□□□□ -0.53
COL6A2-202ENST00000310645 OR5AN1Q8NGI8 311 aa11.73□□□□□ -0.53
COL6A2-202ENST00000310645 TMEM167AQ8TBQ9 72 aa11.73□□□□□ -0.53
COL6A2-202ENST00000310645 GFRA4Q9GZZ7 299 aa11.73□□□□□ -0.53
COL6A2-202ENST00000310645 ARRDC1-AS1Q9H2J1 176 aa11.73□□□□□ -0.53
COL6A2-202ENST00000310645 GP9P14770 177 aa11.73□□□□□ -0.53
COL6A2-202ENST00000310645 PAX2Q02962 417 aa11.73□□□□□ -0.53
COL6A2-202ENST00000310645 ZNF788Q6ZQV5 615 aa11.73□□□□□ -0.53
COL6A2-202ENST00000310645 RIGQ13278 110 aa11.72□□□□□ -0.53
COL6A2-202ENST00000310645 VSTM2AQ8TAG5 236 aa11.72□□□□□ -0.53
COL6A2-202ENST00000310645 RAI1Q7Z5J4 1906 aaPredicted RBP11.72□□□□□ -0.53
COL6A2-202ENST00000310645 FBLL1A6NHQ2 334 aaKnown RBP11.72□□□□□ -0.53
COL6A2-202ENST00000310645 IGHV1-46P01743 117 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 296.2 ms