RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 LINC00614P0C842 121 aa13.27□□□□□ -0.28
SSH3-201ENST00000308127 MUC21Q5SSG8 566 aa13.27□□□□□ -0.28
SSH3-201ENST00000308127 C17orf77Q96MU5 243 aa13.27□□□□□ -0.28
SSH3-201ENST00000308127 Q9H3A6 140 aa13.27□□□□□ -0.28
SSH3-201ENST00000308127 RPP21Q9H633 154 aaKnown RBP13.27□□□□□ -0.28
SSH3-201ENST00000308127 IGHV1-24A0A0C4DH33 117 aa13.27□□□□□ -0.29
SSH3-201ENST00000308127 HBBP68871 147 aa13.27□□□□□ -0.29
SSH3-201ENST00000308127 MPV17L2Q567V2 206 aa13.27□□□□□ -0.29
SSH3-201ENST00000308127 GOLT1AQ6ZVE7 132 aa13.27□□□□□ -0.29
SSH3-201ENST00000308127 FAM169BQ8N8A8 192 aa13.27□□□□□ -0.29
SSH3-201ENST00000308127 PPIAL4EA0A075B759 164 aa13.26□□□□□ -0.29
SSH3-201ENST00000308127 C17orf100A8MU93 164 aa13.26□□□□□ -0.29
SSH3-201ENST00000308127 PPIAL4DF5H284 164 aa13.26□□□□□ -0.29
SSH3-201ENST00000308127 PPIAL4FP0DN26 164 aa13.26□□□□□ -0.29
SSH3-201ENST00000308127 PCP4P48539 62 aa13.26□□□□□ -0.29
SSH3-201ENST00000308127 FOXE3Q13461 319 aa13.26□□□□□ -0.29
SSH3-201ENST00000308127 MRGPRG-AS1Q2M3A8 158 aa13.26□□□□□ -0.29
SSH3-201ENST00000308127 FAM231DQ6ZW35 169 aa13.26□□□□□ -0.29
SSH3-201ENST00000308127 ZNF596Q8TC21 504 aa13.26□□□□□ -0.29
SSH3-201ENST00000308127 GPR82Q96P67 336 aa13.26□□□□□ -0.29
SSH3-201ENST00000308127 WASHC3Q9Y3C0 194 aa13.26□□□□□ -0.29
SSH3-201ENST00000308127 MAP1AP78559 2803 aaPredicted RBP13.26□□□□□ -0.29
SSH3-201ENST00000308127 IGLC7A0M8Q6 106 aa13.26□□□□□ -0.29
SSH3-201ENST00000308127 SUB1P53999 127 aaKnown RBP eCLIP13.26□□□□□ -0.29
SSH3-201ENST00000308127 FAM120AOSQ5T036 256 aa13.26□□□□□ -0.29
SSH3-201ENST00000308127 TEX36Q5VZQ5 186 aa13.26□□□□□ -0.29
SSH3-201ENST00000308127 MRPL52Q86TS9 123 aaKnown RBP13.26□□□□□ -0.29
SSH3-201ENST00000308127 OR4F17Q8NGA8 305 aa13.26□□□□□ -0.29
SSH3-201ENST00000308127 PERPQ96FX8 193 aa13.26□□□□□ -0.29
SSH3-201ENST00000308127 LINC00574Q9H8X3 128 aa13.26□□□□□ -0.29
SSH3-201ENST00000308127 COX7A1P24310 79 aa13.26□□□□□ -0.29
SSH3-201ENST00000308127 MYCNOSP40205 109 aa13.26□□□□□ -0.29
SSH3-201ENST00000308127 PRSS33Q8NF86 280 aa13.26□□□□□ -0.29
SSH3-201ENST00000308127 WIPF2Q8TF74 440 aaPredicted RBP13.26□□□□□ -0.29
SSH3-201ENST00000308127 DAZAP1Q96EP5 407 aaKnown RBP13.26□□□□□ -0.29
SSH3-201ENST00000308127 TMEM70Q9BUB7 260 aa13.26□□□□□ -0.29
SSH3-201ENST00000308127 RNF24Q9Y225 148 aa13.26□□□□□ -0.29
SSH3-201ENST00000308127 A0A1B0GXF2 115 aa13.25□□□□□ -0.29
SSH3-201ENST00000308127 NDUFB3O43676 98 aa13.25□□□□□ -0.29
SSH3-201ENST00000308127 SFTPCP11686 197 aa13.25□□□□□ -0.29
SSH3-201ENST00000308127 FXYD7P58549 80 aa13.25□□□□□ -0.29
SSH3-201ENST00000308127 ATRXP46100 2492 aa13.25□□□□□ -0.29
SSH3-201ENST00000308127 RBP4P02753 201 aa13.25□□□□□ -0.29
SSH3-201ENST00000308127 COL8A1P27658 744 aa13.25□□□□□ -0.29
SSH3-201ENST00000308127 NCOR1P1Q9H4R4 102 aa13.25□□□□□ -0.29
SSH3-201ENST00000308127 ANKHD1Q8IWZ3 2542 aaKnown RBP13.24□□□□□ -0.29
SSH3-201ENST00000308127 TCRAP04437 139 aa13.24□□□□□ -0.29
SSH3-201ENST00000308127 TNFRSF1AP19438 455 aa13.24□□□□□ -0.29
SSH3-201ENST00000308127 VMA21Q3ZAQ7 101 aa13.24□□□□□ -0.29
SSH3-201ENST00000308127 FBXL15Q9H469 300 aa13.24□□□□□ -0.29
SSH3-201ENST00000308127 TMSB15BA0A087X1C1 80 aa13.24□□□□□ -0.29
SSH3-201ENST00000308127 IGHV2-26A0A0B4J1V2 119 aa13.24□□□□□ -0.29
SSH3-201ENST00000308127 CHEK1O14757 476 aa13.24□□□□□ -0.29
SSH3-201ENST00000308127 LOXP28300 417 aaPredicted RBP13.24□□□□□ -0.29
SSH3-201ENST00000308127 LOXL4Q96JB6 756 aa13.24□□□□□ -0.29
SSH3-201ENST00000308127 ZFHX3Q15911 3703 aa13.24□□□□□ -0.29
SSH3-201ENST00000308127 TMEM178BH3BS89 294 aa13.23□□□□□ -0.29
SSH3-201ENST00000308127 KLK10O43240 276 aa13.23□□□□□ -0.29
SSH3-201ENST00000308127 LEPROTL1O95214 131 aa13.23□□□□□ -0.29
SSH3-201ENST00000308127 GP9P14770 177 aa13.23□□□□□ -0.29
SSH3-201ENST00000308127 TMEM108Q6UXF1 575 aa13.23□□□□□ -0.29
SSH3-201ENST00000308127 THAP8Q8NA92 274 aa13.23□□□□□ -0.29
SSH3-201ENST00000308127 VSTM2AQ8TAG5 236 aa13.23□□□□□ -0.29
SSH3-201ENST00000308127 CBY3A6NI87 242 aa13.23□□□□□ -0.29
SSH3-201ENST00000308127 PSG1P11464 419 aa13.23□□□□□ -0.29
SSH3-201ENST00000308127 RPL27AP46776 148 aaKnown RBP13.23□□□□□ -0.29
SSH3-201ENST00000308127 KLF5Q13887 457 aaPredicted RBP13.23□□□□□ -0.29
SSH3-201ENST00000308127 MLST8Q9BVC4 326 aa13.23□□□□□ -0.29
SSH3-201ENST00000308127 COX11Q9Y6N1 276 aa13.23□□□□□ -0.29
SSH3-201ENST00000308127 OR2J3O76001 311 aa13.22□□□□□ -0.29
SSH3-201ENST00000308127 RNF151Q2KHN1 245 aa13.22□□□□□ -0.29
SSH3-201ENST00000308127 LRRC10Q5BKY1 277 aa13.22□□□□□ -0.29
SSH3-201ENST00000308127 TEX45Q8NA69 505 aa13.22□□□□□ -0.29
SSH3-201ENST00000308127 A8MWL6 223 aa13.22□□□□□ -0.29
SSH3-201ENST00000308127 NUDT3O95989 172 aa13.22□□□□□ -0.29
SSH3-201ENST00000308127 VAMP3Q15836 100 aa13.22□□□□□ -0.29
SSH3-201ENST00000308127 KLF17Q5JT82 389 aaPredicted RBP13.22□□□□□ -0.29
SSH3-201ENST00000308127 BCL6BQ8N143 479 aaPredicted RBP13.22□□□□□ -0.29
SSH3-201ENST00000308127 TMUB1Q9BVT8 246 aa13.22□□□□□ -0.29
SSH3-201ENST00000308127 A0A0G2JNJ9 132 aa13.22□□□□□ -0.29
SSH3-201ENST00000308127 SYS1-DBNDD2H3BUS1 97 aa13.22□□□□□ -0.29
SSH3-201ENST00000308127 Q9UFV3 132 aa13.22□□□□□ -0.29
SSH3-201ENST00000308127 ARMS2P0C7Q2 107 aa13.21□□□□□ -0.29
SSH3-201ENST00000308127 SRSF12Q8WXF0 261 aaKnown RBP13.21□□□□□ -0.29
SSH3-201ENST00000308127 COL12A1Q99715 3063 aa13.21□□□□□ -0.29
SSH3-201ENST00000308127 M0R3E3 92 aa13.21□□□□□ -0.3
SSH3-201ENST00000308127 THBDP07204 575 aa13.21□□□□□ -0.3
SSH3-201ENST00000308127 CEACAM8P31997 349 aaPredicted RBP13.21□□□□□ -0.3
SSH3-201ENST00000308127 ATP5IP56385 69 aaPredicted RBP13.21□□□□□ -0.3
SSH3-201ENST00000308127 C5orf17Q8NAS9 161 aa13.21□□□□□ -0.3
SSH3-201ENST00000308127 TMEM186Q96B77 213 aa13.21□□□□□ -0.3
SSH3-201ENST00000308127 DYNLRB1Q9NP97 96 aa13.21□□□□□ -0.3
SSH3-201ENST00000308127 A0A087X0K7 114 aa13.2□□□□□ -0.3
SSH3-201ENST00000308127 FAM106CPP0CH98 169 aa13.2□□□□□ -0.3
SSH3-201ENST00000308127 IGHV1-8P0DP01 117 aa13.2□□□□□ -0.3
SSH3-201ENST00000308127 PLGLAQ15195 96 aa13.2□□□□□ -0.3
SSH3-201ENST00000308127 FAM106AQ4KMX7 169 aa13.2□□□□□ -0.3
SSH3-201ENST00000308127 ZNF738Q8NE65 137 aa13.2□□□□□ -0.3
SSH3-201ENST00000308127 LOC102724200A0A096LPH7 203 aaPredicted RBP13.2□□□□□ -0.3
SSH3-201ENST00000308127 LOC389332A0A1B0GUA5 103 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms