RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 KIAA2026Q5HYC2 2103 aa13.04□□□□□ -0.32
USP42-201ENST00000306177 TRGV11A0A075B6L2 103 aa13.04□□□□□ -0.32
USP42-201ENST00000306177 A0A1B0GV90 55 aa13.04□□□□□ -0.32
USP42-201ENST00000306177 SCRT1Q9BWW7 348 aa13.04□□□□□ -0.32
USP42-201ENST00000306177 RSPO3Q9BXY4 272 aaPredicted RBP13.04□□□□□ -0.32
USP42-201ENST00000306177 SPSB3Q6PJ21 355 aa13.04□□□□□ -0.32
USP42-201ENST00000306177 ABCA4P78363 2273 aa13.04□□□□□ -0.32
USP42-201ENST00000306177 CA1P00915 261 aaPredicted RBP13.04□□□□□ -0.32
USP42-201ENST00000306177 IFI27P40305 119 aaPredicted RBP13.04□□□□□ -0.32
USP42-201ENST00000306177 LHFPL4Q7Z7J7 247 aa13.04□□□□□ -0.32
USP42-201ENST00000306177 DOPEY2Q9Y3R5 2298 aa13.04□□□□□ -0.32
USP42-201ENST00000306177 PPIFP30405 207 aaKnown RBP13.04□□□□□ -0.32
USP42-201ENST00000306177 VOPP1Q96AW1 172 aa13.04□□□□□ -0.32
USP42-201ENST00000306177 TTC32Q5I0X7 151 aa13.03□□□□□ -0.32
USP42-201ENST00000306177 SIGLEC9Q9Y336 463 aa13.03□□□□□ -0.32
USP42-201ENST00000306177 FANCMQ8IYD8 2048 aa13.03□□□□□ -0.32
USP42-201ENST00000306177 WISP1O95388 367 aa13.03□□□□□ -0.32
USP42-201ENST00000306177 RPL15P61313 204 aaKnown RBP13.03□□□□□ -0.32
USP42-201ENST00000306177 PLA2G2CQ5R387 149 aa13.03□□□□□ -0.32
USP42-201ENST00000306177 PROK2Q9HC23 129 aa13.03□□□□□ -0.32
USP42-201ENST00000306177 NPIPB5A8MRT5 1133 aa13.03□□□□□ -0.32
USP42-201ENST00000306177 USF3Q68DE3 2245 aa13.03□□□□□ -0.32
USP42-201ENST00000306177 PCNX1Q96RV3 2341 aa13.02□□□□□ -0.32
USP42-201ENST00000306177 COL8A2P25067 703 aa13.02□□□□□ -0.32
USP42-201ENST00000306177 ORMDL2Q53FV1 153 aa13.02□□□□□ -0.32
USP42-201ENST00000306177 LYPD2Q6UXB3 125 aa13.02□□□□□ -0.32
USP42-201ENST00000306177 VCX2Q9H322 139 aa13.02□□□□□ -0.32
USP42-201ENST00000306177 LYL1P12980 280 aa13.02□□□□□ -0.32
USP42-201ENST00000306177 EXOC3-AS1Q8N2X6 119 aa13.02□□□□□ -0.32
USP42-201ENST00000306177 NTF4P34130 210 aa13.02□□□□□ -0.33
USP42-201ENST00000306177 FOXL1Q12952 345 aa13.02□□□□□ -0.33
USP42-201ENST00000306177 KIR3DL3Q8N743 410 aa13.02□□□□□ -0.33
USP42-201ENST00000306177 CHCHD1Q96BP2 118 aaKnown RBP13.02□□□□□ -0.33
USP42-201ENST00000306177 IGKV2-40A0A087WW87 121 aaPredicted RBP13.02□□□□□ -0.33
USP42-201ENST00000306177 H3BUX3 64 aa13.02□□□□□ -0.33
USP42-201ENST00000306177 IGKV2D-40P01614 121 aaPredicted RBP13.02□□□□□ -0.33
USP42-201ENST00000306177 TCRAP04437 139 aa13.02□□□□□ -0.33
USP42-201ENST00000306177 TMEM155Q4W5P6 130 aa13.02□□□□□ -0.33
USP42-201ENST00000306177 LINC01551Q86U37 167 aa13.02□□□□□ -0.33
USP42-201ENST00000306177 CYSLTR1Q9Y271 337 aa13.02□□□□□ -0.33
USP42-201ENST00000306177 DOCK7Q96N67 2140 aa13.01□□□□□ -0.33
USP42-201ENST00000306177 DPH3Q96FX2 82 aa13.01□□□□□ -0.33
USP42-201ENST00000306177 TRBV7-1A0A0A6YYK4 115 aa13.01□□□□□ -0.33
USP42-201ENST00000306177 C15orf62A8K5M9 175 aa13.01□□□□□ -0.33
USP42-201ENST00000306177 HTN3P15516 51 aa13.01□□□□□ -0.33
USP42-201ENST00000306177 SRD5A1P18405 259 aa13.01□□□□□ -0.33
USP42-201ENST00000306177 CD33P20138 364 aa13.01□□□□□ -0.33
USP42-201ENST00000306177 TOMM7Q9P0U1 55 aa13.01□□□□□ -0.33
USP42-201ENST00000306177 FRMPD3Q5JV73 1810 aa13.01□□□□□ -0.33
USP42-201ENST00000306177 PLXNA2O75051 1894 aa13.01□□□□□ -0.33
USP42-201ENST00000306177 A0A0G2JRQ6 117 aa13.01□□□□□ -0.33
USP42-201ENST00000306177 E7EQL1 145 aa13.01□□□□□ -0.33
USP42-201ENST00000306177 ITGB1BP1O14713 200 aa13.01□□□□□ -0.33
USP42-201ENST00000306177 KLF17Q5JT82 389 aaPredicted RBP13.01□□□□□ -0.33
USP42-201ENST00000306177 BRD3OSQ6XYD6 125 aa13.01□□□□□ -0.33
USP42-201ENST00000306177 MTURNQ8N3F0 131 aa13.01□□□□□ -0.33
USP42-201ENST00000306177 LINC00205P59089 165 aa13□□□□□ -0.33
USP42-201ENST00000306177 GLRX5Q86SX6 157 aa13□□□□□ -0.33
USP42-201ENST00000306177 HEATR5AQ86XA9 2040 aa13□□□□□ -0.33
USP42-201ENST00000306177 UBE2CO00762 179 aa13□□□□□ -0.33
USP42-201ENST00000306177 CXCL1P09341 107 aa13□□□□□ -0.33
USP42-201ENST00000306177 NIT1Q86X76 327 aa13□□□□□ -0.33
USP42-201ENST00000306177 ZNF524Q96C55 264 aa13□□□□□ -0.33
USP42-201ENST00000306177 JKAMPQ9P055 326 aa13□□□□□ -0.33
USP42-201ENST00000306177 COLCA2A8K830 154 aa13□□□□□ -0.33
USP42-201ENST00000306177 K7ENP7 123 aa13□□□□□ -0.33
USP42-201ENST00000306177 C11orf44Q8N8P7 122 aa13□□□□□ -0.33
USP42-201ENST00000306177 RFNGQ9Y644 331 aa13□□□□□ -0.33
USP42-201ENST00000306177 CNTFRP26992 372 aa12.99□□□□□ -0.33
USP42-201ENST00000306177 DERL1Q9BUN8 251 aa12.99□□□□□ -0.33
USP42-201ENST00000306177 DPM2O94777 84 aa12.99□□□□□ -0.33
USP42-201ENST00000306177 CRIM1Q9NZV1 1036 aa12.99□□□□□ -0.33
USP42-201ENST00000306177 C9orf139Q6ZV77 190 aa12.99□□□□□ -0.33
USP42-201ENST00000306177 HS3ST6Q96QI5 342 aa12.99□□□□□ -0.33
USP42-201ENST00000306177 WNK2Q9Y3S1 2297 aa12.99□□□□□ -0.33
USP42-201ENST00000306177 TRAV9-2A0A087WT02 112 aa12.99□□□□□ -0.33
USP42-201ENST00000306177 FNDC10F2Z333 226 aa12.99□□□□□ -0.33
USP42-201ENST00000306177 RNASE2P10153 161 aaKnown RBP12.99□□□□□ -0.33
USP42-201ENST00000306177 PRR30Q53SZ7 412 aaPredicted RBP12.99□□□□□ -0.33
USP42-201ENST00000306177 Q6ZRM9 215 aa12.99□□□□□ -0.33
USP42-201ENST00000306177 LY96Q9Y6Y9 160 aa12.99□□□□□ -0.33
USP42-201ENST00000306177 HELZP42694 1942 aaKnown RBP12.99□□□□□ -0.33
USP42-201ENST00000306177 EVI2AP22794 236 aa12.98□□□□□ -0.33
USP42-201ENST00000306177 LINC00587B1AMM8 73 aa12.98□□□□□ -0.33
USP42-201ENST00000306177 TDGF1P13385 188 aa12.98□□□□□ -0.33
USP42-201ENST00000306177 REG4Q9BYZ8 158 aa12.98□□□□□ -0.33
USP42-201ENST00000306177 GZMBP10144 247 aa12.98□□□□□ -0.33
USP42-201ENST00000306177 PRTN3P24158 256 aa12.98□□□□□ -0.33
USP42-201ENST00000306177 C3orf36Q3SXR2 165 aa12.98□□□□□ -0.33
USP42-201ENST00000306177 CFAP161Q6P656 301 aa12.98□□□□□ -0.33
USP42-201ENST00000306177 DOCK9Q9BZ29 2069 aa12.98□□□□□ -0.33
USP42-201ENST00000306177 RASL11AQ6T310 242 aa12.98□□□□□ -0.33
USP42-201ENST00000306177 IGFL3Q6UXB1 125 aa12.98□□□□□ -0.33
USP42-201ENST00000306177 LAMTOR2Q9Y2Q5 125 aa12.98□□□□□ -0.33
USP42-201ENST00000306177 LY6HO94772 140 aa12.97□□□□□ -0.33
USP42-201ENST00000306177 APOMO95445 188 aa12.97□□□□□ -0.33
USP42-201ENST00000306177 IGKV1-16P04430 117 aa12.97□□□□□ -0.33
USP42-201ENST00000306177 LMO1P25800 156 aa12.97□□□□□ -0.33
USP42-201ENST00000306177 CMC4P56277 68 aaPredicted RBP12.97□□□□□ -0.33
USP42-201ENST00000306177 WFDC12Q8WWY7 111 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms