RNA–Protein interactions for RNA: ENST00000296824.3

CCDC127-201, Transcript of coiled-coil domain containing 127, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC127, Length 9,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC127-201ENST00000296824 TMEM187Q14656 261 aa13.12□□□□□ -0.31
CCDC127-201ENST00000296824 C3orf36Q3SXR2 165 aa13.12□□□□□ -0.31
CCDC127-201ENST00000296824 MRPS18CQ9Y3D5 142 aaKnown RBP13.12□□□□□ -0.31
CCDC127-201ENST00000296824 LOC105371267A0A1B0GV96 52 aa13.11□□□□□ -0.31
CCDC127-201ENST00000296824 GLMPQ8WWB7 406 aa13.11□□□□□ -0.31
CCDC127-201ENST00000296824 NPDC1Q9NQX5 325 aaPredicted RBP13.11□□□□□ -0.31
CCDC127-201ENST00000296824 DTX4Q9Y2E6 619 aa13.11□□□□□ -0.31
CCDC127-201ENST00000296824 SUPT4H1P63272 117 aaKnown RBP13.11□□□□□ -0.31
CCDC127-201ENST00000296824 PRIMA1Q86XR5 153 aa13.11□□□□□ -0.31
CCDC127-201ENST00000296824 TRACP01848 142 aa13.11□□□□□ -0.31
CCDC127-201ENST00000296824 TMEM170AQ8WVE7 144 aa13.11□□□□□ -0.31
CCDC127-201ENST00000296824 HRKO00198 91 aa13.11□□□□□ -0.31
CCDC127-201ENST00000296824 DAD1P61803 113 aa13.11□□□□□ -0.31
CCDC127-201ENST00000296824 LY6G5BQ8NDX9 201 aa13.11□□□□□ -0.31
CCDC127-201ENST00000296824 OSTCQ9NRP0 149 aa13.11□□□□□ -0.31
CCDC127-201ENST00000296824 A0A1W2PRE2 83 aa13.11□□□□□ -0.31
CCDC127-201ENST00000296824 IGHV3-48P01763 117 aa13.11□□□□□ -0.31
CCDC127-201ENST00000296824 ASPHD2Q6ICH7 369 aa13.11□□□□□ -0.31
CCDC127-201ENST00000296824 SAP25Q8TEE9 199 aa13.11□□□□□ -0.31
CCDC127-201ENST00000296824 UMODP07911 640 aa13.1□□□□□ -0.31
CCDC127-201ENST00000296824 TRBV25-1A0A075B6N4 114 aa13.1□□□□□ -0.31
CCDC127-201ENST00000296824 C15orf32Q32M92 178 aa13.1□□□□□ -0.31
CCDC127-201ENST00000296824 COL18A1P39060 1754 aa13.1□□□□□ -0.31
CCDC127-201ENST00000296824 GPR179Q6PRD1 2367 aa13.1□□□□□ -0.31
CCDC127-201ENST00000296824 CCL3L1P16619 93 aa13.1□□□□□ -0.31
CCDC127-201ENST00000296824 C9orf139Q6ZV77 190 aa13.1□□□□□ -0.31
CCDC127-201ENST00000296824 TMEM242Q9NWH2 141 aa13.1□□□□□ -0.31
CCDC127-201ENST00000296824 MDKP21741 143 aaPredicted RBP13.1□□□□□ -0.31
CCDC127-201ENST00000296824 MPV17L2Q567V2 206 aa13.1□□□□□ -0.31
CCDC127-201ENST00000296824 E9PLN8 166 aa13.1□□□□□ -0.31
CCDC127-201ENST00000296824 CECR9P0C854 216 aa13.1□□□□□ -0.31
CCDC127-201ENST00000296824 KLHL30-AS1Q8NEE0 82 aa13.1□□□□□ -0.31
CCDC127-201ENST00000296824 SLAQ13239 276 aa13.1□□□□□ -0.31
CCDC127-201ENST00000296824 TNFRSF12AQ9NP84 129 aa13.1□□□□□ -0.31
CCDC127-201ENST00000296824 DKK4Q9UBT3 224 aa13.1□□□□□ -0.31
CCDC127-201ENST00000296824 TRBV20-1A0A075B6N2 111 aa13.09□□□□□ -0.31
CCDC127-201ENST00000296824 IL18BPO95998 194 aa13.09□□□□□ -0.31
CCDC127-201ENST00000296824 OCIAD2Q56VL3 154 aa13.09□□□□□ -0.31
CCDC127-201ENST00000296824 KLF17Q5JT82 389 aaPredicted RBP13.09□□□□□ -0.31
CCDC127-201ENST00000296824 MSRB3Q8IXL7 192 aa13.09□□□□□ -0.31
CCDC127-201ENST00000296824 TRAV40A0A0B4J280 105 aa13.09□□□□□ -0.31
CCDC127-201ENST00000296824 OR9G9P0C7N8 305 aa13.09□□□□□ -0.31
CCDC127-201ENST00000296824 RNF5Q99942 180 aa13.09□□□□□ -0.31
CCDC127-201ENST00000296824 SCO2A0A1W2PP80 73 aa13.09□□□□□ -0.31
CCDC127-201ENST00000296824 SRRM4A7MD48 611 aaKnown RBP13.09□□□□□ -0.31
CCDC127-201ENST00000296824 PATE3B3GLJ2 98 aa13.09□□□□□ -0.31
CCDC127-201ENST00000296824 C1QL1O75973 258 aa13.09□□□□□ -0.31
CCDC127-201ENST00000296824 C1orf159Q96HA4 380 aa13.09□□□□□ -0.31
CCDC127-201ENST00000296824 A0A1B0GTI1 187 aa13.09□□□□□ -0.31
CCDC127-201ENST00000296824 BDP1A6H8Y1 2624 aa13.09□□□□□ -0.31
CCDC127-201ENST00000296824 RPP25Q9BUL9 199 aaKnown RBP13.09□□□□□ -0.31
CCDC127-201ENST00000296824 ZFYVE26Q68DK2 2539 aa13.08□□□□□ -0.31
CCDC127-201ENST00000296824 IFITM1P13164 125 aa13.08□□□□□ -0.31
CCDC127-201ENST00000296824 TIMM23O14925 209 aa13.08□□□□□ -0.32
CCDC127-201ENST00000296824 C1QTNF9P0C862 333 aa13.08□□□□□ -0.32
CCDC127-201ENST00000296824 PLAC1Q9HBJ0 212 aa13.08□□□□□ -0.32
CCDC127-201ENST00000296824 PILRAQ9UKJ1 303 aa13.08□□□□□ -0.32
CCDC127-201ENST00000296824 ZIC3O60481 467 aa13.08□□□□□ -0.32
CCDC127-201ENST00000296824 PSPNO60542 156 aa13.08□□□□□ -0.32
CCDC127-201ENST00000296824 SAA2-SAA4A0A096LPE2 208 aa13.08□□□□□ -0.32
CCDC127-201ENST00000296824 SAA2P0DJI9 122 aaPredicted RBP13.08□□□□□ -0.32
CCDC127-201ENST00000296824 LINC01356Q8N9X3 169 aa13.08□□□□□ -0.32
CCDC127-201ENST00000296824 FBLIM1Q8WUP2 373 aa13.08□□□□□ -0.32
CCDC127-201ENST00000296824 UTF1Q5T230 341 aa13.08□□□□□ -0.32
CCDC127-201ENST00000296824 TSKUQ8WUA8 353 aa13.08□□□□□ -0.32
CCDC127-201ENST00000296824 SRSF7Q16629 238 aaKnown RBP eCLIP13.08□□□□□ -0.32
CCDC127-201ENST00000296824 IMMP1LQ96LU5 166 aa13.08□□□□□ -0.32
CCDC127-201ENST00000296824 ZNF138P52744 262 aa13.07□□□□□ -0.32
CCDC127-201ENST00000296824 SERF1AO75920 110 aa13.07□□□□□ -0.32
CCDC127-201ENST00000296824 FUSP35637 526 aaKnown RBP eCLIP13.07□□□□□ -0.32
CCDC127-201ENST00000296824 FOXS1O43638 330 aa13.07□□□□□ -0.32
CCDC127-201ENST00000296824 COL24A1Q17RW2 1714 aa13.07□□□□□ -0.32
CCDC127-201ENST00000296824 M0R1W7 72 aa13.07□□□□□ -0.32
CCDC127-201ENST00000296824 NANOS3P60323 173 aaKnown RBP13.07□□□□□ -0.32
CCDC127-201ENST00000296824 LRRK2Q5S007 2527 aa13.07□□□□□ -0.32
CCDC127-201ENST00000296824 RPL35AP18077 110 aaKnown RBP13.07□□□□□ -0.32
CCDC127-201ENST00000296824 HIVEP3Q5T1R4 2406 aa13.07□□□□□ -0.32
CCDC127-201ENST00000296824 TPTE2P1Q5T6R2 138 aa13.06□□□□□ -0.32
CCDC127-201ENST00000296824 PGFP49763 221 aa13.06□□□□□ -0.32
CCDC127-201ENST00000296824 SRSF8Q9BRL6 282 aaKnown RBP13.06□□□□□ -0.32
CCDC127-201ENST00000296824 TM2D1Q9BX74 207 aa13.06□□□□□ -0.32
CCDC127-201ENST00000296824 SLC25A16P16260 332 aa13.06□□□□□ -0.32
CCDC127-201ENST00000296824 ACTL10Q5JWF8 245 aa13.06□□□□□ -0.32
CCDC127-201ENST00000296824 LYPD1Q8N2G4 141 aa13.06□□□□□ -0.32
CCDC127-201ENST00000296824 PPP1R32Q7Z5V6 425 aa13.06□□□□□ -0.32
CCDC127-201ENST00000296824 IGHV3-64A0A075B6Q5 118 aa13.06□□□□□ -0.32
CCDC127-201ENST00000296824 UBE2V1Q13404 147 aa13.06□□□□□ -0.32
CCDC127-201ENST00000296824 SIGLEC12Q96PQ1 595 aa13.05□□□□□ -0.32
CCDC127-201ENST00000296824 TRAV13-2A0A0B4J235 113 aa13.05□□□□□ -0.32
CCDC127-201ENST00000296824 F5H768 121 aa13.05□□□□□ -0.32
CCDC127-201ENST00000296824 TRPT1Q86TN4 253 aaKnown RBP13.05□□□□□ -0.32
CCDC127-201ENST00000296824 MBNL3Q9NUK0 354 aaKnown RBP13.05□□□□□ -0.32
CCDC127-201ENST00000296824 A0A1B0GTL3 188 aa13.05□□□□□ -0.32
CCDC127-201ENST00000296824 GAGE12BA1L429 117 aa13.05□□□□□ -0.32
CCDC127-201ENST00000296824 NDUFB1O75438 58 aa13.05□□□□□ -0.32
CCDC127-201ENST00000296824 RPUSD1Q9UJJ7 312 aaKnown RBP13.05□□□□□ -0.32
CCDC127-201ENST00000296824 HIST1H2BKO60814 126 aa13.05□□□□□ -0.32
CCDC127-201ENST00000296824 HIST1H2BJP06899 126 aa13.05□□□□□ -0.32
CCDC127-201ENST00000296824 EVI2AP22794 236 aa13.05□□□□□ -0.32
CCDC127-201ENST00000296824 HIST1H2BOP23527 126 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms