RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 GTSF1Q8WW33 167 aa13.52□□□□□ -0.25
CTDP1-201ENST00000075430 URB1-AS1Q96HZ7 61 aa13.52□□□□□ -0.25
CTDP1-201ENST00000075430 RNF7Q9UBF6 113 aa13.52□□□□□ -0.25
CTDP1-201ENST00000075430 EPDR1Q9UM22 224 aa13.52□□□□□ -0.25
CTDP1-201ENST00000075430 KIR2DS2P43631 304 aa13.51□□□□□ -0.25
CTDP1-201ENST00000075430 ZNF430Q9H8G1 570 aaPredicted RBP13.51□□□□□ -0.25
CTDP1-201ENST00000075430 MRPS16Q9Y3D3 137 aaKnown RBP13.51□□□□□ -0.25
CTDP1-201ENST00000075430 PTPRBP23467 1997 aa13.51□□□□□ -0.25
CTDP1-201ENST00000075430 CRYABP02511 175 aaKnown RBP13.51□□□□□ -0.25
CTDP1-201ENST00000075430 SAPCD1Q5SSQ6 148 aa13.51□□□□□ -0.25
CTDP1-201ENST00000075430 C18orf15Q96N68 181 aa13.51□□□□□ -0.25
CTDP1-201ENST00000075430 PRR33A8MZF0 331 aa13.51□□□□□ -0.25
CTDP1-201ENST00000075430 DLL1O00548 723 aa13.51□□□□□ -0.25
CTDP1-201ENST00000075430 CNTFRP26992 372 aa13.51□□□□□ -0.25
CTDP1-201ENST00000075430 NMUP48645 174 aa13.51□□□□□ -0.25
CTDP1-201ENST00000075430 C22orf34Q6ZV56 151 aa13.51□□□□□ -0.25
CTDP1-201ENST00000075430 FAM222BQ8WU58 562 aa13.51□□□□□ -0.25
CTDP1-201ENST00000075430 MEGF9Q9H1U4 602 aa13.51□□□□□ -0.25
CTDP1-201ENST00000075430 RALYQ9UKM9 306 aaKnown RBP13.51□□□□□ -0.25
CTDP1-201ENST00000075430 FAM106CPP0CH98 169 aa13.5□□□□□ -0.25
CTDP1-201ENST00000075430 FAM106AQ4KMX7 169 aa13.5□□□□□ -0.25
CTDP1-201ENST00000075430 PLA2G2CQ5R387 149 aa13.5□□□□□ -0.25
CTDP1-201ENST00000075430 GAL3ST2Q9H3Q3 398 aa13.5□□□□□ -0.25
CTDP1-201ENST00000075430 LY96Q9Y6Y9 160 aa13.5□□□□□ -0.25
CTDP1-201ENST00000075430 SPG11Q96JI7 2443 aa13.5□□□□□ -0.25
CTDP1-201ENST00000075430 A8MWL6 223 aa13.5□□□□□ -0.25
CTDP1-201ENST00000075430 TAX1BP3O14907 124 aa13.5□□□□□ -0.25
CTDP1-201ENST00000075430 RPP21Q9H633 154 aaKnown RBP13.5□□□□□ -0.25
CTDP1-201ENST00000075430 GAGE12BA1L429 117 aa13.5□□□□□ -0.25
CTDP1-201ENST00000075430 H3BUT2 72 aa13.5□□□□□ -0.25
CTDP1-201ENST00000075430 COX19Q49B96 90 aa13.5□□□□□ -0.25
CTDP1-201ENST00000075430 BVES-AS1Q5T3Y7 98 aa13.5□□□□□ -0.25
CTDP1-201ENST00000075430 FA2HQ7L5A8 372 aa13.5□□□□□ -0.25
CTDP1-201ENST00000075430 MBD6Q96DN6 1003 aa13.5□□□□□ -0.25
CTDP1-201ENST00000075430 IGHV2-70DA0A0C4DH43 119 aa13.49□□□□□ -0.25
CTDP1-201ENST00000075430 H0YJW9 148 aa13.49□□□□□ -0.25
CTDP1-201ENST00000075430 C17orf77Q96MU5 243 aa13.49□□□□□ -0.25
CTDP1-201ENST00000075430 Q9H3A6 140 aa13.49□□□□□ -0.25
CTDP1-201ENST00000075430 GAGE10A6NGK3 116 aa13.49□□□□□ -0.25
CTDP1-201ENST00000075430 F2RL2O00254 374 aa13.49□□□□□ -0.25
CTDP1-201ENST00000075430 OCIAD2Q56VL3 154 aa13.49□□□□□ -0.25
CTDP1-201ENST00000075430 GPR82Q96P67 336 aa13.49□□□□□ -0.25
CTDP1-201ENST00000075430 ARMS2P0C7Q2 107 aa13.48□□□□□ -0.25
CTDP1-201ENST00000075430 COX7A1P24310 79 aa13.48□□□□□ -0.25
CTDP1-201ENST00000075430 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.48□□□□□ -0.25
CTDP1-201ENST00000075430 C7orf71A4D174 169 aa13.48□□□□□ -0.25
CTDP1-201ENST00000075430 M0R3E3 92 aa13.48□□□□□ -0.25
CTDP1-201ENST00000075430 NCR2O95944 276 aa13.48□□□□□ -0.25
CTDP1-201ENST00000075430 BPIFA4PQ86YQ2 179 aa13.48□□□□□ -0.25
CTDP1-201ENST00000075430 FXYD5Q96DB9 178 aa13.48□□□□□ -0.25
CTDP1-201ENST00000075430 SMKR1H3BMG3 65 aa13.48□□□□□ -0.25
CTDP1-201ENST00000075430 ZNF207O43670 478 aaKnown RBP13.48□□□□□ -0.25
CTDP1-201ENST00000075430 MRPL27Q9P0M9 148 aaKnown RBP13.48□□□□□ -0.25
CTDP1-201ENST00000075430 RPUSD1Q9UJJ7 312 aaKnown RBP13.48□□□□□ -0.25
CTDP1-201ENST00000075430 CFHR2P36980 270 aa13.47□□□□□ -0.25
CTDP1-201ENST00000075430 RPL24P83731 157 aaKnown RBP13.47□□□□□ -0.25
CTDP1-201ENST00000075430 THYN1Q9P016 225 aa13.47□□□□□ -0.25
CTDP1-201ENST00000075430 IGFL4Q6B9Z1 124 aa13.47□□□□□ -0.25
CTDP1-201ENST00000075430 TTTY13Q9BZ97 58 aa13.47□□□□□ -0.25
CTDP1-201ENST00000075430 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.46□□□□□ -0.253e-7■■■■□ 21.1
CTDP1-201ENST00000075430 GPR183P32249 361 aa13.46□□□□□ -0.25
CTDP1-201ENST00000075430 C2orf83Q53S99 150 aa13.46□□□□□ -0.25
CTDP1-201ENST00000075430 MRPL52Q86TS9 123 aaKnown RBP13.46□□□□□ -0.25
CTDP1-201ENST00000075430 ADTRPQ96IZ2 230 aa13.46□□□□□ -0.25
CTDP1-201ENST00000075430 LOXL1Q08397 574 aaPredicted RBP13.46□□□□□ -0.25
CTDP1-201ENST00000075430 MZT1Q08AG7 82 aa13.46□□□□□ -0.25
CTDP1-201ENST00000075430 KLF17Q5JT82 389 aaPredicted RBP13.46□□□□□ -0.25
CTDP1-201ENST00000075430 K7EM74 188 aa13.46□□□□□ -0.26
CTDP1-201ENST00000075430 AP5S1Q9NUS5 200 aa13.46□□□□□ -0.26
CTDP1-201ENST00000075430 A0A1W2PPI3 338 aa13.45□□□□□ -0.26
CTDP1-201ENST00000075430 TCRBV4S1A1TA0A5B7 111 aa13.45□□□□□ -0.26
CTDP1-201ENST00000075430 FAM231BA6NCW3 169 aa13.45□□□□□ -0.26
CTDP1-201ENST00000075430 C22orf46C9J442 243 aa13.45□□□□□ -0.26
CTDP1-201ENST00000075430 K7EP13 123 aa13.45□□□□□ -0.26
CTDP1-201ENST00000075430 SUB1P53999 127 aaKnown RBP eCLIP13.45□□□□□ -0.26
CTDP1-201ENST00000075430 LYPD2Q6UXB3 125 aa13.45□□□□□ -0.26
CTDP1-201ENST00000075430 GAFA1Q96PS6 74 aa13.45□□□□□ -0.26
CTDP1-201ENST00000075430 FAM90A9PA6NNJ1 464 aa13.45□□□□□ -0.26
CTDP1-201ENST00000075430 LYNX1G3V0Z9 82 aa13.45□□□□□ -0.26
CTDP1-201ENST00000075430 IGHV1-46P01743 117 aa13.45□□□□□ -0.26
CTDP1-201ENST00000075430 HLA-DRB1P01911 266 aa13.45□□□□□ -0.26
CTDP1-201ENST00000075430 LYNX1P0DP58 116 aa13.45□□□□□ -0.26
CTDP1-201ENST00000075430 PERPQ96FX8 193 aa13.45□□□□□ -0.26
CTDP1-201ENST00000075430 IGHV3-23P01764 117 aa13.44□□□□□ -0.26
CTDP1-201ENST00000075430 GUSBP1Q15486 140 aa13.44□□□□□ -0.26
CTDP1-201ENST00000075430 CHODLQ9H9P2 273 aa13.44□□□□□ -0.26
CTDP1-201ENST00000075430 TNRC6BQ9UPQ9 1833 aaKnown RBP13.44□□□□□ -0.26
CTDP1-201ENST00000075430 TRAV30A0A087WSZ9 112 aa13.44□□□□□ -0.26
CTDP1-201ENST00000075430 J3QW42 95 aa13.44□□□□□ -0.26
CTDP1-201ENST00000075430 CNIH1O95406 144 aa13.44□□□□□ -0.26
CTDP1-201ENST00000075430 IFI27P40305 119 aaPredicted RBP13.44□□□□□ -0.26
CTDP1-201ENST00000075430 AKAP13Q12802 2813 aa13.44□□□□□ -0.26
CTDP1-201ENST00000075430 TNFRSF1AP19438 455 aa13.44□□□□□ -0.26
CTDP1-201ENST00000075430 CDKN1BP46527 198 aa13.44□□□□□ -0.26
CTDP1-201ENST00000075430 C12orf54Q6X4T0 127 aa13.44□□□□□ -0.26
CTDP1-201ENST00000075430 LRRC10Q5BKY1 277 aa13.43□□□□□ -0.26
CTDP1-201ENST00000075430 MTURNQ8N3F0 131 aa13.43□□□□□ -0.26
CTDP1-201ENST00000075430 MRPL32Q9BYC8 188 aaKnown RBP13.43□□□□□ -0.26
CTDP1-201ENST00000075430 ANKHD1Q8IWZ3 2542 aaKnown RBP13.43□□□□□ -0.26
CTDP1-201ENST00000075430 PPIFP30405 207 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms