RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 GLMPQ8WWB7 406 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 HIST1H2BLQ99880 126 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 ANKRD11Q6UB99 2663 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-201ENST00000011700 TRAV8-1A0A0A6YYK1 113 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 SERF1AO75920 110 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 FBXL7Q9UJT9 491 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 CD28P10747 220 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 COX6A1P12074 109 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 PDE6GP18545 87 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 ZNF138P52744 262 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 EGR4Q05215 589 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 ERCC8Q13216 396 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 LINC01590Q5TEZ4 76 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 ITLN1Q8WWA0 313 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 ZNF462Q96JM2 2506 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 TRAV2A0A0B4J234 112 aa5.08□□□□□ -1.6
VPS13D-201ENST00000011700 VDAC2P45880 294 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-201ENST00000011700 DSCR8Q96T75 97 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 IGLV3-12A0A075B6K2 115 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 C17orf100A8MU93 164 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 RPL23P62829 140 aaKnown RBP5.07□□□□□ -1.6
VPS13D-201ENST00000011700 PAX8Q06710 450 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 EFNB3Q15768 340 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 PYY3Q5JQD4 70 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 LINC00114Q6XXX2 140 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 PPDPFLQ8WWR9 84 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 LINC01587Q99440 93 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 VKORC1Q9BQB6 163 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 METRNQ9UJH8 293 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 KLHDC2Q9Y2U9 406 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 C2orf82Q6UX34 121 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 RNF166Q96A37 237 aaPredicted RBP5.07□□□□□ -1.6
VPS13D-201ENST00000011700 AZU1P20160 251 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 BVES-AS1Q5T3Y7 98 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 C1QL3Q5VWW1 255 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 LENEPQ9Y5L5 61 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 IGKV3D-15A0A087WSY6 115 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 HLA-DMBP28068 263 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 CFHR1Q03591 330 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 SPEM2Q0P670 501 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 MAJINQ3KP22 176 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 ZNF385AQ96PM9 386 aaKnown RBP5.07□□□□□ -1.6
VPS13D-201ENST00000011700 PKD1L2Q7Z442 2459 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 CGAP01215 116 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 REG1AP05451 166 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 PSMB11A5LHX3 300 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 H3BUT2 72 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 C1QL1O75973 258 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 PLPPR2Q96GM1 343 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 GGTLC1Q9BX51 225 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 GRIFINA4D1Z8 144 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 TDGF1P3P51864 188 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 ID3Q02535 119 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 Q0VG73 95 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 ZNF48Q96MX3 618 aaPredicted RBP5.07□□□□□ -1.6
VPS13D-201ENST00000011700 TMEM126AQ9H061 195 aa5.07□□□□□ -1.6
VPS13D-201ENST00000011700 MORN2Q502X0 79 aa5.06□□□□□ -1.6
VPS13D-201ENST00000011700 WNT2P09544 360 aa5.06□□□□□ -1.6
VPS13D-201ENST00000011700 CEACAM8P31997 349 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-201ENST00000011700 TMEM92Q6UXU6 159 aa5.06□□□□□ -1.6
VPS13D-201ENST00000011700 UBE2WQ96B02 151 aa5.06□□□□□ -1.6
VPS13D-201ENST00000011700 ZNF525Q8N782 197 aa5.06□□□□□ -1.6
VPS13D-201ENST00000011700 SAP25Q8TEE9 199 aa5.06□□□□□ -1.6
VPS13D-201ENST00000011700 C14orf144Q96I85 54 aa5.06□□□□□ -1.6
VPS13D-201ENST00000011700 KLK15Q9H2R5 256 aa5.06□□□□□ -1.6
VPS13D-201ENST00000011700 R3HDMLQ9H3Y0 253 aa5.06□□□□□ -1.6
VPS13D-201ENST00000011700 E9PLN8 166 aa5.06□□□□□ -1.6
VPS13D-201ENST00000011700 IFITM1P13164 125 aa5.06□□□□□ -1.6
VPS13D-201ENST00000011700 OTX1P32242 354 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-201ENST00000011700 SUPT4H1P63272 117 aaKnown RBP5.06□□□□□ -1.6
VPS13D-201ENST00000011700 ERVH48-1M5A8F1 160 aa5.06□□□□□ -1.6
VPS13D-201ENST00000011700 NDUFA3O95167 84 aa5.06□□□□□ -1.6
VPS13D-201ENST00000011700 LYL1P12980 280 aa5.06□□□□□ -1.6
VPS13D-201ENST00000011700 REG1BP48304 166 aa5.06□□□□□ -1.6
VPS13D-201ENST00000011700 CHCHD2Q9Y6H1 151 aaPredicted RBP5.06□□□□□ -1.6
VPS13D-201ENST00000011700 TRPT1Q86TN4 253 aaKnown RBP5.06□□□□□ -1.6
VPS13D-201ENST00000011700 TMEM52Q8NDY8 209 aa5.06□□□□□ -1.6
VPS13D-201ENST00000011700 TIMM21Q9BVV7 248 aa5.06□□□□□ -1.6
VPS13D-201ENST00000011700 IGKV3-7A0A075B6H7 116 aa5.06□□□□□ -1.6
VPS13D-201ENST00000011700 IGKV1-8A0A0C4DH67 115 aa5.06□□□□□ -1.6
VPS13D-201ENST00000011700 IGKV1D-33P01593 117 aa5.06□□□□□ -1.6
VPS13D-201ENST00000011700 IGKV1-33P01594 117 aa5.06□□□□□ -1.6
VPS13D-201ENST00000011700 CSRP2Q16527 193 aa5.06□□□□□ -1.6
VPS13D-201ENST00000011700 DEFB124Q8NES8 71 aa5.06□□□□□ -1.6
VPS13D-201ENST00000011700 HGFACQ04756 655 aa5.06□□□□□ -1.6
VPS13D-201ENST00000011700 WNT10AQ9GZT5 417 aa5.05□□□□□ -1.6
VPS13D-201ENST00000011700 TRGV4A0A0C4DH28 118 aa5.05□□□□□ -1.6
VPS13D-201ENST00000011700 SHISA9B4DS77 424 aa5.05□□□□□ -1.6
VPS13D-201ENST00000011700 C20orf144Q9BQM9 153 aa5.05□□□□□ -1.6
VPS13D-201ENST00000011700 SYS1-DBNDD2H3BUS1 97 aa5.05□□□□□ -1.6
VPS13D-201ENST00000011700 DAZ1Q9NQZ3 744 aaKnown RBP5.05□□□□□ -1.6
VPS13D-201ENST00000011700 A0A1W2PPI3 338 aa5.05□□□□□ -1.6
VPS13D-201ENST00000011700 RNASE4P34096 147 aaKnown RBP5.05□□□□□ -1.6
VPS13D-201ENST00000011700 DMRTA2Q96SC8 542 aa5.05□□□□□ -1.6
VPS13D-201ENST00000011700 MEGF9Q9H1U4 602 aa5.05□□□□□ -1.6
VPS13D-201ENST00000011700 POLQO75417 2590 aa5.05□□□□□ -1.6
VPS13D-201ENST00000011700 IGHV2OR16-5A0A0B4J2B6 119 aa5.05□□□□□ -1.6
VPS13D-201ENST00000011700 A0A1W2PQF6 199 aa5.05□□□□□ -1.6
VPS13D-201ENST00000011700 RTBDNQ9BSG5 229 aaPredicted RBP5.05□□□□□ -1.6
VPS13D-201ENST00000011700 IGHV3OR15-7A0A075B7D8 119 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms