RNA–Protein interactions for RNA: ENST00000635273.1

SMARCA2-238, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-238	ENST00000635273	RTL8A	Q9BWD3	113 aa		3.87	□□□□□ -1.79
SMARCA2-238	ENST00000635273	OR51V1	Q9H2C8	321 aa		3.87	□□□□□ -1.79
SMARCA2-238	ENST00000635273	C19orf12	Q9NSK7	152 aa		3.87	□□□□□ -1.79
SMARCA2-238	ENST00000635273	ARMC1	Q9NVT9	282 aa		3.87	□□□□□ -1.79
SMARCA2-238	ENST00000635273	IL20	Q9NYY1	176 aa		3.87	□□□□□ -1.79
SMARCA2-238	ENST00000635273		A6NIN4	97 aa		3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	RFPL4A	A6NLU0	287 aa		3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	RFPL4AL1	F8VTS6	287 aa		3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	IFNG	P01579	166 aa		3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	APOC1	P02654	83 aa		3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	RLN2	P04090	185 aa		3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	MAS1	P04201	325 aa		3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	CCL3L1	P16619	93 aa		3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	CFL1	P23528	166 aa	Known RBP	3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	CAV3	P56539	151 aa		3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	BSX	Q3C1V8	233 aa		3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	LINC01590	Q5TEZ4	76 aa		3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	RPL13AP3	Q6NVV1	102 aa		3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	HAGHL	Q6PII5	290 aa	Predicted RBP	3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	RASSF6	Q6ZTQ3	369 aa		3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	PRNT	Q86SH4	94 aa		3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	SLC35G3	Q8N808	338 aa		3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	OR4S1	Q8NGB4	309 aa		3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	RNF133	Q8WVZ7	376 aa		3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	CMTM5	Q96DZ9	223 aa		3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	CDCA4	Q9BXL8	241 aa		3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	FAM107B	Q9H098	131 aa		3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	TLNRD1	Q9H1K6	362 aa		3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	OR51I2	Q9H344	312 aa		3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	CD300A	Q9UGN4	299 aa		3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	HILPDA	Q9Y5L2	63 aa		3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	MPC1	Q9Y5U8	109 aa		3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	DSCAML1	Q8TD84	2053 aa		3.86	□□□□□ -1.79
SMARCA2-238	ENST00000635273	TMEM210	A6NLX4	147 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273		H3BSH0	61 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273		K7EIL1	84 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	SYNGR1	O43759	233 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	NDUFS6	O75380	124 aa	Known RBP	3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	IL4	P05112	153 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	ZNF3	P17036	446 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	CD24	P25063	80 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	BLVRA	P53004	296 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	GNG3	P63215	75 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	ZNF616	Q08AN1	781 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	TRAM1	Q15629	374 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	SNCB	Q16143	134 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	CEACAM21	Q3KPI0	293 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	LDLRAD2	Q5SZI1	272 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	MORN3	Q6PF18	240 aa	Predicted RBP	3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	UNQ9165/PRO28630	Q6UXU0	137 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	CCDC121	Q6ZUS5	278 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	NDUFA11	Q86Y39	141 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	OSR2	Q8N2R0	312 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	OR8B12	Q8NGG6	310 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	BLNK	Q8WV28	456 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	AQP3	Q92482	292 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	GPR82	Q96P67	336 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	NIPSNAP1	Q9BPW8	284 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	TTTY10	Q9BZA0	68 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	SND1-IT1	Q9HBX3	110 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	ABCB9	Q9NP78	766 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	RAB22A	Q9UL26	194 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	BAIAP2	Q9UQB8	552 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	SAMHD1	Q9Y3Z3	626 aa	Known RBP	3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	COL7A1	Q02388	2944 aa		3.85	□□□□□ -1.79
SMARCA2-238	ENST00000635273	TMEM269	A0A1B0GVZ9	245 aa		3.84	□□□□□ -1.79
SMARCA2-238	ENST00000635273	TCRBV4S1A1T	A0A5B7	111 aa		3.84	□□□□□ -1.79
SMARCA2-238	ENST00000635273	COLCA2	A8K830	154 aa		3.84	□□□□□ -1.79
SMARCA2-238	ENST00000635273		A8MWL6	223 aa		3.84	□□□□□ -1.79
SMARCA2-238	ENST00000635273	NRAS	P01111	189 aa		3.84	□□□□□ -1.79
SMARCA2-238	ENST00000635273	HAAO	P46952	286 aa		3.84	□□□□□ -1.79
SMARCA2-238	ENST00000635273	EDDM3B	P56851	147 aa		3.84	□□□□□ -1.79
SMARCA2-238	ENST00000635273	C10orf99	Q6UWK7	81 aa		3.84	□□□□□ -1.79
SMARCA2-238	ENST00000635273	ANGPTL5	Q86XS5	388 aa		3.84	□□□□□ -1.79
SMARCA2-238	ENST00000635273	PDPN	Q86YL7	162 aa		3.84	□□□□□ -1.79
SMARCA2-238	ENST00000635273	DEFB107A	Q8IZN7	70 aa		3.84	□□□□□ -1.79
SMARCA2-238	ENST00000635273	ZNF561	Q8N587	486 aa		3.84	□□□□□ -1.79
SMARCA2-238	ENST00000635273	WFDC9	Q8NEX5	89 aa		3.84	□□□□□ -1.79
SMARCA2-238	ENST00000635273	OR5A2	Q8NGI9	324 aa		3.84	□□□□□ -1.79
SMARCA2-238	ENST00000635273	OTOS	Q8NHW6	89 aa		3.84	□□□□□ -1.79
SMARCA2-238	ENST00000635273	TEX47	Q8TBZ9	253 aa		3.84	□□□□□ -1.79
SMARCA2-238	ENST00000635273	RPS4Y2	Q8TD47	263 aa		3.84	□□□□□ -1.79
SMARCA2-238	ENST00000635273	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	3.84	□□□□□ -1.79
SMARCA2-238	ENST00000635273	MALSU1	Q96EH3	234 aa		3.84	□□□□□ -1.79
SMARCA2-238	ENST00000635273	GPR84	Q9NQS5	396 aa		3.84	□□□□□ -1.79
SMARCA2-238	ENST00000635273	PARP11	Q9NR21	331 aa		3.84	□□□□□ -1.79
SMARCA2-238	ENST00000635273	CMC2	Q9NRP2	79 aa		3.84	□□□□□ -1.79
SMARCA2-238	ENST00000635273	RASL12	Q9NYN1	266 aa		3.84	□□□□□ -1.79
SMARCA2-238	ENST00000635273	USE1	Q9NZ43	259 aa		3.84	□□□□□ -1.79
SMARCA2-238	ENST00000635273	LRCOL1	A6NCL2	159 aa		3.83	□□□□□ -1.8
SMARCA2-238	ENST00000635273	C17orf98	A8MV24	154 aa		3.83	□□□□□ -1.8
SMARCA2-238	ENST00000635273	VGLL3	A8MV65	326 aa		3.83	□□□□□ -1.8
SMARCA2-238	ENST00000635273	GNGT2	O14610	69 aa		3.83	□□□□□ -1.8
SMARCA2-238	ENST00000635273	TNFAIP8	O95379	198 aa		3.83	□□□□□ -1.8
SMARCA2-238	ENST00000635273	ZNF728	P0DKX0	622 aa		3.83	□□□□□ -1.8
SMARCA2-238	ENST00000635273	ALOX5AP	P20292	161 aa		3.83	□□□□□ -1.8
SMARCA2-238	ENST00000635273	NTF3	P20783	257 aa		3.83	□□□□□ -1.8
SMARCA2-238	ENST00000635273	DLX6	P56179	175 aa		3.83	□□□□□ -1.8
SMARCA2-238	ENST00000635273	CD164	Q04900	197 aa		3.83	□□□□□ -1.8
SMARCA2-238	ENST00000635273	APOF	Q13790	326 aa		3.83	□□□□□ -1.8

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