RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 OR51G1Q8NGK1 321 aa18.49■□□□□ 0.55
VEGFA-228ENST00000617771 ZFP92A6NM28 416 aa18.48■□□□□ 0.55
VEGFA-228ENST00000617771 RPP30P78346 268 aaKnown RBP18.48■□□□□ 0.55
VEGFA-228ENST00000617771 GAMTQ14353 236 aa18.48■□□□□ 0.55
VEGFA-228ENST00000617771 CIB3Q96Q77 187 aaPredicted RBP18.48■□□□□ 0.55
VEGFA-228ENST00000617771 PFDN2Q9UHV9 154 aa18.48■□□□□ 0.55
VEGFA-228ENST00000617771 FABP1P07148 127 aa18.47■□□□□ 0.55
VEGFA-228ENST00000617771 HOXB5P09067 269 aa18.47■□□□□ 0.55
VEGFA-228ENST00000617771 NUP62P37198 522 aaPredicted RBP18.47■□□□□ 0.55
VEGFA-228ENST00000617771 OR11H2Q8NH07 326 aa18.47■□□□□ 0.55
VEGFA-228ENST00000617771 RNF125Q96EQ8 232 aa18.47■□□□□ 0.55
VEGFA-228ENST00000617771 PAIP2BQ9ULR5 123 aaKnown RBP18.47■□□□□ 0.55
VEGFA-228ENST00000617771 DNAH1Q9P2D7 4330 aa18.46■□□□□ 0.55
VEGFA-228ENST00000617771 BUB3O43684 328 aa18.46■□□□□ 0.55
VEGFA-228ENST00000617771 BAK1Q16611 211 aa18.46■□□□□ 0.55
VEGFA-228ENST00000617771 SIGLEC15Q6ZMC9 328 aa18.46■□□□□ 0.55
VEGFA-228ENST00000617771 TRPT1Q86TN4 253 aaKnown RBP18.46■□□□□ 0.55
VEGFA-228ENST00000617771 SYNGR2O43760 224 aa18.45■□□□□ 0.54
VEGFA-228ENST00000617771 NDUFB6O95139 128 aa18.45■□□□□ 0.54
VEGFA-228ENST00000617771 TMEM41BQ5BJD5 291 aa18.45■□□□□ 0.54
VEGFA-228ENST00000617771 GGNBP1Q5YKI7 109 aa18.45■□□□□ 0.54
VEGFA-228ENST00000617771 OR8G2PQ6IF36 304 aa18.45■□□□□ 0.54
VEGFA-228ENST00000617771 MORN3Q6PF18 240 aaPredicted RBP18.45■□□□□ 0.54
VEGFA-228ENST00000617771 PBDC1Q9BVG4 233 aa18.45■□□□□ 0.54
VEGFA-228ENST00000617771 CENPXA8MT69 81 aa18.44■□□□□ 0.54
VEGFA-228ENST00000617771 SPP1P10451 314 aa18.44■□□□□ 0.54
VEGFA-228ENST00000617771 SNRPD3P62318 126 aaKnown RBP18.44■□□□□ 0.54
VEGFA-228ENST00000617771 CEMP1Q6PRD7 247 aaPredicted RBP18.44■□□□□ 0.54
VEGFA-228ENST00000617771 MAGT1Q9H0U3 335 aa18.44■□□□□ 0.54
VEGFA-228ENST00000617771 C11orf68Q9H3H3 251 aaKnown RBP18.44■□□□□ 0.54
VEGFA-228ENST00000617771 NRN1Q9NPD7 142 aa18.44■□□□□ 0.54
VEGFA-228ENST00000617771 IGKV1D-37A0A075B6S9 117 aa18.43■□□□□ 0.54
VEGFA-228ENST00000617771 C9orf170A2RU37 121 aa18.43■□□□□ 0.54
VEGFA-228ENST00000617771 KNCNA6PVL3 124 aa18.43■□□□□ 0.54
VEGFA-228ENST00000617771 ZNF90Q03938 601 aa18.43■□□□□ 0.54
VEGFA-228ENST00000617771 PSMG4Q5JS54 123 aa18.43■□□□□ 0.54
VEGFA-228ENST00000617771 SEPSECSQ9HD40 501 aaKnown RBP18.43■□□□□ 0.54
VEGFA-228ENST00000617771 KLK5Q9Y337 293 aaPredicted RBP18.43■□□□□ 0.54
VEGFA-228ENST00000617771 WRBO00258 174 aa18.42■□□□□ 0.54
VEGFA-228ENST00000617771 ACTL10Q5JWF8 245 aa18.42■□□□□ 0.54
VEGFA-228ENST00000617771 COQ8AQ8NI60 647 aa18.42■□□□□ 0.54
VEGFA-228ENST00000617771 TRGV9Q99603 122 aa18.42■□□□□ 0.54
VEGFA-228ENST00000617771 LINC00854A0A1B0GVQ3 168 aa18.41■□□□□ 0.54
VEGFA-228ENST00000617771 SNRPGP15A8MWD9 76 aa18.41■□□□□ 0.54
VEGFA-228ENST00000617771 LYZP61626 148 aa18.41■□□□□ 0.54
VEGFA-228ENST00000617771 C7orf50Q9BRJ6 194 aaKnown RBP18.41■□□□□ 0.54
VEGFA-228ENST00000617771 RAB40CQ96S21 281 aa18.4■□□□□ 0.54
VEGFA-228ENST00000617771 SDHCQ99643 169 aaPredicted RBP18.4■□□□□ 0.54
VEGFA-228ENST00000617771 FLVCR2Q9UPI3 526 aa18.4■□□□□ 0.54
VEGFA-228ENST00000617771 ALMS1Q8TCU4 4167 aa18.39■□□□□ 0.53
VEGFA-228ENST00000617771 ADAP1O75689 374 aa18.39■□□□□ 0.53
VEGFA-228ENST00000617771 IFNA21P01568 189 aa18.39■□□□□ 0.53
VEGFA-228ENST00000617771 OR4E1P0C645 316 aa18.39■□□□□ 0.53
VEGFA-228ENST00000617771 SPANXN5Q5MJ07 72 aa18.39■□□□□ 0.53
VEGFA-228ENST00000617771 THAP8Q8NA92 274 aa18.39■□□□□ 0.53
VEGFA-228ENST00000617771 MFFQ9GZY8 342 aa18.39■□□□□ 0.53
VEGFA-228ENST00000617771 NDUFA13Q9P0J0 144 aa18.39■□□□□ 0.53
VEGFA-228ENST00000617771 FBXL17Q9UF56 701 aa18.39■□□□□ 0.53
VEGFA-228ENST00000617771 PLECQ15149 4684 aaKnown RBP18.38■□□□□ 0.53
VEGFA-228ENST00000617771 CFDP00746 253 aaPredicted RBP18.38■□□□□ 0.53
VEGFA-228ENST00000617771 GIG44P09565 113 aaPredicted RBP18.38■□□□□ 0.53
VEGFA-228ENST00000617771 OR2F1Q13607 317 aa18.38■□□□□ 0.53
VEGFA-228ENST00000617771 C1orf194Q5T5A4 169 aa18.38■□□□□ 0.53
VEGFA-228ENST00000617771 C11orf45Q8TAV5 145 aa18.38■□□□□ 0.53
VEGFA-228ENST00000617771 PHLDA1Q8WV24 401 aaPredicted RBP18.38■□□□□ 0.53
VEGFA-228ENST00000617771 PPP1R14BQ96C90 147 aa18.38■□□□□ 0.53
VEGFA-228ENST00000617771 STRAPQ9Y3F4 350 aaKnown RBP18.38■□□□□ 0.53
VEGFA-228ENST00000617771 PRSS46E5RG02 174 aa18.37■□□□□ 0.53
VEGFA-228ENST00000617771 IL7P13232 177 aa18.37■□□□□ 0.53
VEGFA-228ENST00000617771 C4BPBP20851 252 aa18.37■□□□□ 0.53
VEGFA-228ENST00000617771 C4orf46Q504U0 113 aa18.37■□□□□ 0.53
VEGFA-228ENST00000617771 LINC00476Q8WZB0 136 aa18.37■□□□□ 0.53
VEGFA-228ENST00000617771 IGKV1OR2-108A0A075B7D4 117 aa18.36■□□□□ 0.53
VEGFA-228ENST00000617771 H3BP45 60 aa18.36■□□□□ 0.53
VEGFA-228ENST00000617771 BTCP35070 178 aa18.36■□□□□ 0.53
VEGFA-228ENST00000617771 NUTF2P61970 127 aaKnown RBP18.36■□□□□ 0.53
VEGFA-228ENST00000617771 ID3Q02535 119 aa18.36■□□□□ 0.53
VEGFA-228ENST00000617771 CNPY1Q3B7I2 92 aa18.36■□□□□ 0.53
VEGFA-228ENST00000617771 ANXA7P20073 488 aaKnown RBP18.35■□□□□ 0.53
VEGFA-228ENST00000617771 NKX2-1P43699 371 aaPredicted RBP18.35■□□□□ 0.53
VEGFA-228ENST00000617771 NANOS2P60321 138 aaKnown RBP18.35■□□□□ 0.53
VEGFA-228ENST00000617771 HYDINQ4G0P3 5121 aa18.34■□□□□ 0.53
VEGFA-228ENST00000617771 DEFB4AO15263 64 aa18.34■□□□□ 0.53
VEGFA-228ENST00000617771 MIFP14174 115 aa18.34■□□□□ 0.53
VEGFA-228ENST00000617771 ID1P41134 155 aa18.34■□□□□ 0.53
VEGFA-228ENST00000617771 POLR2GP62487 172 aaKnown RBP eCLIP18.34■□□□□ 0.53
VEGFA-228ENST00000617771 AKR1C1Q04828 323 aa18.34■□□□□ 0.53
VEGFA-228ENST00000617771 Q8NAQ8 132 aa18.34■□□□□ 0.53
VEGFA-228ENST00000617771 OR4D5Q8NGN0 318 aa18.34■□□□□ 0.53
VEGFA-228ENST00000617771 LY6G6CO95867 125 aa18.33■□□□□ 0.52
VEGFA-228ENST00000617771 OR8I2Q8N0Y5 310 aa18.33■□□□□ 0.52
VEGFA-228ENST00000617771 BPIFCQ8NFQ6 507 aa18.33■□□□□ 0.52
VEGFA-228ENST00000617771 C1QTNF4Q9BXJ3 329 aa18.33■□□□□ 0.52
VEGFA-228ENST00000617771 PSENENQ9NZ42 101 aa18.33■□□□□ 0.52
VEGFA-228ENST00000617771 SLC45A2Q9UMX9 530 aa18.33■□□□□ 0.52
VEGFA-228ENST00000617771 ZNF705EA8MWA4 302 aaPredicted RBP18.32■□□□□ 0.52
VEGFA-228ENST00000617771 H3BMM0 161 aa18.32■□□□□ 0.52
VEGFA-228ENST00000617771 PSMB3P49720 205 aa18.32■□□□□ 0.52
VEGFA-228ENST00000617771 ACOT7LQ6ZUV0 252 aa18.32■□□□□ 0.52
VEGFA-228ENST00000617771 CLEC5AQ9NY25 188 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms