RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 TRBV6-6A0A0A6YYG2 114 aa8.81□□□□□ -1
CLTCL1-209ENST00000617103 C17orf100A8MU93 164 aa8.81□□□□□ -1
CLTCL1-209ENST00000617103 FOXH1O75593 365 aa8.81□□□□□ -1
CLTCL1-209ENST00000617103 TCRAP04437 139 aa8.81□□□□□ -1
CLTCL1-209ENST00000617103 Q6ZS49 121 aa8.81□□□□□ -1
CLTCL1-209ENST00000617103 OR10W1Q8NGF6 305 aa8.81□□□□□ -1
CLTCL1-209ENST00000617103 LRRK1Q38SD2 2015 aa8.81□□□□□ -1
CLTCL1-209ENST00000617103 TRAV21A0A0B4J279 112 aa8.81□□□□□ -1
CLTCL1-209ENST00000617103 CD300EQ496F6 205 aaPredicted RBP8.81□□□□□ -1
CLTCL1-209ENST00000617103 KLF17Q5JT82 389 aaPredicted RBP8.81□□□□□ -1
CLTCL1-209ENST00000617103 STPG1Q5TH74 334 aa8.81□□□□□ -1
CLTCL1-209ENST00000617103 NPIPB5A8MRT5 1133 aa8.8□□□□□ -1
CLTCL1-209ENST00000617103 TFF1P04155 84 aa8.8□□□□□ -1
CLTCL1-209ENST00000617103 LAGE3Q14657 143 aa8.8□□□□□ -1
CLTCL1-209ENST00000617103 OCIAD2Q56VL3 154 aa8.8□□□□□ -1
CLTCL1-209ENST00000617103 FDCSPQ8NFU4 85 aa8.8□□□□□ -1
CLTCL1-209ENST00000617103 PNRC2Q9NPJ4 139 aaKnown RBP8.8□□□□□ -1
CLTCL1-209ENST00000617103 COL11A2P13942 1736 aaPredicted RBP8.8□□□□□ -1
CLTCL1-209ENST00000617103 TRAV12-3A0A0B4J271 114 aa8.8□□□□□ -1
CLTCL1-209ENST00000617103 RBMY1BA6NDE4 496 aaKnown RBP8.8□□□□□ -1
CLTCL1-209ENST00000617103 RBMY1EA6NEQ0 496 aaKnown RBP8.8□□□□□ -1
CLTCL1-209ENST00000617103 RBMY1DP0C7P1 496 aaKnown RBP8.8□□□□□ -1
CLTCL1-209ENST00000617103 RBMY1A1P0DJD3 496 aaKnown RBP8.8□□□□□ -1
CLTCL1-209ENST00000617103 RBMY1CP0DJD4 496 aa8.8□□□□□ -1
CLTCL1-209ENST00000617103 MAJINQ3KP22 176 aa8.8□□□□□ -1
CLTCL1-209ENST00000617103 TMEM42Q69YG0 159 aa8.8□□□□□ -1
CLTCL1-209ENST00000617103 EP300Q09472 2414 aaPredicted RBP8.8□□□□□ -1
CLTCL1-209ENST00000617103 GREB1Q4ZG55 1949 aa8.8□□□□□ -1
CLTCL1-209ENST00000617103 NTF4P34130 210 aa8.8□□□□□ -1
CLTCL1-209ENST00000617103 DLX4Q92988 240 aaPredicted RBP8.8□□□□□ -1
CLTCL1-209ENST00000617103 TMEM133Q9H2Q1 129 aa8.8□□□□□ -1
CLTCL1-209ENST00000617103 CST9LQ9H4G1 147 aa8.8□□□□□ -1
CLTCL1-209ENST00000617103 TOMM7Q9P0U1 55 aa8.8□□□□□ -1
CLTCL1-209ENST00000617103 SRSF6Q13247 344 aaKnown RBP8.8□□□□□ -1
CLTCL1-209ENST00000617103 PSPNO60542 156 aa8.79□□□□□ -1
CLTCL1-209ENST00000617103 UCNP55089 124 aa8.79□□□□□ -1
CLTCL1-209ENST00000617103 ATXN8Q156A1 80 aa8.79□□□□□ -1
CLTCL1-209ENST00000617103 RPUSD1Q9UJJ7 312 aaKnown RBP8.79□□□□□ -1
CLTCL1-209ENST00000617103 ROS1P08922 2347 aa8.79□□□□□ -1
CLTCL1-209ENST00000617103 A0A0G2JRQ6 117 aa8.79□□□□□ -1
CLTCL1-209ENST00000617103 NCR2O95944 276 aa8.79□□□□□ -1
CLTCL1-209ENST00000617103 INTS1Q8N201 2190 aaKnown RBP8.79□□□□□ -1
CLTCL1-209ENST00000617103 POLEQ07864 2286 aa8.79□□□□□ -1
CLTCL1-209ENST00000617103 C15orf62A8K5M9 175 aa8.79□□□□□ -1
CLTCL1-209ENST00000617103 Q6ZRM9 215 aa8.79□□□□□ -1
CLTCL1-209ENST00000617103 SLC25A15Q9Y619 301 aa8.79□□□□□ -1
CLTCL1-209ENST00000617103 PDCD11Q14690 1871 aaKnown RBP8.79□□□□□ -1
CLTCL1-209ENST00000617103 C5orf63A6NC05 138 aa8.79□□□□□ -1
CLTCL1-209ENST00000617103 PMS2P5A8MQ11 134 aa8.79□□□□□ -1
CLTCL1-209ENST00000617103 TMPRSS3P57727 454 aa8.79□□□□□ -1
CLTCL1-209ENST00000617103 LYZL1Q6UWQ5 148 aa8.79□□□□□ -1
CLTCL1-209ENST00000617103 RALGAPA2Q2PPJ7 1873 aa8.78□□□□□ -1
CLTCL1-209ENST00000617103 THSD7AQ9UPZ6 1657 aa8.78□□□□□ -1
CLTCL1-209ENST00000617103 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.78□□□□□ -1
CLTCL1-209ENST00000617103 GFRA3O60609 400 aa8.78□□□□□ -1
CLTCL1-209ENST00000617103 CD7P09564 240 aa8.78□□□□□ -1
CLTCL1-209ENST00000617103 PRTN3P24158 256 aa8.78□□□□□ -1
CLTCL1-209ENST00000617103 EPOPA6NHQ4 379 aa8.78□□□□□ -1
CLTCL1-209ENST00000617103 SRRM5B3KS81 715 aa8.78□□□□□ -1
CLTCL1-209ENST00000617103 NPSP0C0P6 89 aa8.78□□□□□ -1
CLTCL1-209ENST00000617103 CDKN1AP38936 164 aa8.78□□□□□ -1
CLTCL1-209ENST00000617103 KLHDC3Q9BQ90 382 aa8.78□□□□□ -1
CLTCL1-209ENST00000617103 KIAA2026Q5HYC2 2103 aa8.78□□□□□ -1
CLTCL1-209ENST00000617103 ABCA7Q8IZY2 2146 aa8.78□□□□□ -1
CLTCL1-209ENST00000617103 CNOT1A5YKK6 2376 aaKnown RBP8.78□□□□□ -1
CLTCL1-209ENST00000617103 C9orf172C9J069 976 aa8.78□□□□□ -1
CLTCL1-209ENST00000617103 TMEM238C9JI98 176 aa8.78□□□□□ -1
CLTCL1-209ENST00000617103 ZC2HC1BQ5TFG8 222 aa8.78□□□□□ -1
CLTCL1-209ENST00000617103 EXOC3-AS1Q8N2X6 119 aa8.78□□□□□ -1
CLTCL1-209ENST00000617103 DUX3Q96PT4 197 aa8.78□□□□□ -1
CLTCL1-209ENST00000617103 E9PQ18 207 aa8.77□□□□□ -1
CLTCL1-209ENST00000617103 ITGB1BP1O14713 200 aa8.77□□□□□ -1
CLTCL1-209ENST00000617103 IGLC2P0DOY2 106 aa8.77□□□□□ -1
CLTCL1-209ENST00000617103 IGLC3P0DOY3 106 aa8.77□□□□□ -1
CLTCL1-209ENST00000617103 PSG3Q16557 428 aa8.77□□□□□ -1
CLTCL1-209ENST00000617103 PRR31Q5SQ13 230 aa8.77□□□□□ -1
CLTCL1-209ENST00000617103 C10orf55Q5SWW7 151 aa8.77□□□□□ -1
CLTCL1-209ENST00000617103 PIMREGQ9BSJ6 248 aa8.77□□□□□ -1
CLTCL1-209ENST00000617103 SMAD7O15105 426 aaKnown RBP8.77□□□□□ -1.01
CLTCL1-209ENST00000617103 BSPH1Q075Z2 132 aa8.77□□□□□ -1.01
CLTCL1-209ENST00000617103 GAGE1Q13065 139 aa8.77□□□□□ -1.01
CLTCL1-209ENST00000617103 C5orf24Q7Z6I8 188 aa8.77□□□□□ -1.01
CLTCL1-209ENST00000617103 C9orf106Q8NAJ2 232 aa8.77□□□□□ -1.01
CLTCL1-209ENST00000617103 TET1Q8NFU7 2136 aa8.77□□□□□ -1.01
CLTCL1-209ENST00000617103 TRGV9Q99603 122 aa8.77□□□□□ -1.01
CLTCL1-209ENST00000617103 ZNF138P52744 262 aa8.77□□□□□ -1.01
CLTCL1-209ENST00000617103 SPAG8Q99932 426 aaPredicted RBP8.77□□□□□ -1.01
CLTCL1-209ENST00000617103 TRIOBPQ9H2D6 2365 aa8.77□□□□□ -1.01
CLTCL1-209ENST00000617103 TRAV8-1A0A0A6YYK1 113 aa8.77□□□□□ -1.01
CLTCL1-209ENST00000617103 TRAV3A0A0B4J244 114 aa8.77□□□□□ -1.01
CLTCL1-209ENST00000617103 A0A1B0GUS0 222 aa8.77□□□□□ -1.01
CLTCL1-209ENST00000617103 M0R2P5 195 aa8.77□□□□□ -1.01
CLTCL1-209ENST00000617103 ADAMTSL5Q6ZMM2 481 aa8.77□□□□□ -1.01
CLTCL1-209ENST00000617103 SLC25A39Q9BZJ4 359 aaPredicted RBP8.77□□□□□ -1.01
CLTCL1-209ENST00000617103 A0A0G2JMZ2 1700 aa8.77□□□□□ -1.01
CLTCL1-209ENST00000617103 LRRC37A2A6NM11 1700 aa8.77□□□□□ -1.01
CLTCL1-209ENST00000617103 LILRA1O75019 489 aa8.76□□□□□ -1.01
CLTCL1-209ENST00000617103 SSBP2P81877 361 aaPredicted RBP8.76□□□□□ -1.01
CLTCL1-209ENST00000617103 FHL1Q13642 323 aa8.76□□□□□ -1.01
CLTCL1-209ENST00000617103 TNFRSF14Q92956 283 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms