RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 ARL3P36405 182 aa12□□□□□ -0.49
TNFRSF11A-206ENST00000617039 TMEM256Q8N2U0 113 aa12□□□□□ -0.49
TNFRSF11A-206ENST00000617039 OR4A5Q8NH83 315 aa12□□□□□ -0.49
TNFRSF11A-206ENST00000617039 RNF2Q99496 336 aa12□□□□□ -0.49
TNFRSF11A-206ENST00000617039 IGHV1-3A0A0C4DH29 117 aa12□□□□□ -0.49
TNFRSF11A-206ENST00000617039 FXYD7P58549 80 aa12□□□□□ -0.49
TNFRSF11A-206ENST00000617039 PRCDQ00LT1 54 aa12□□□□□ -0.49
TNFRSF11A-206ENST00000617039 CLEC19AQ6UXS0 136 aa12□□□□□ -0.49
TNFRSF11A-206ENST00000617039 UFC1Q9Y3C8 167 aa12□□□□□ -0.49
TNFRSF11A-206ENST00000617039 K7EQM0 130 aa11.99□□□□□ -0.49
TNFRSF11A-206ENST00000617039 M0QZ24 198 aa11.99□□□□□ -0.49
TNFRSF11A-206ENST00000617039 UNQ6494/PRO21346Q6UXR6 183 aa11.99□□□□□ -0.49
TNFRSF11A-206ENST00000617039 TMEM144Q7Z5S9 345 aa11.99□□□□□ -0.49
TNFRSF11A-206ENST00000617039 C22orf46C9J442 243 aa11.99□□□□□ -0.49
TNFRSF11A-206ENST00000617039 MPDU1O75352 247 aa11.99□□□□□ -0.49
TNFRSF11A-206ENST00000617039 PDLIM4P50479 330 aa11.99□□□□□ -0.49
TNFRSF11A-206ENST00000617039 NDPQ00604 133 aa11.99□□□□□ -0.49
TNFRSF11A-206ENST00000617039 PMCHL1Q16048 86 aa11.99□□□□□ -0.49
TNFRSF11A-206ENST00000617039 ETFRF1Q6IPR1 90 aa11.99□□□□□ -0.49
TNFRSF11A-206ENST00000617039 ZNF295-AS1Q8N0V1 137 aa11.99□□□□□ -0.49
TNFRSF11A-206ENST00000617039 C11orf42Q8N5U0 333 aa11.99□□□□□ -0.49
TNFRSF11A-206ENST00000617039 OR52E5Q8NH55 327 aa11.99□□□□□ -0.49
TNFRSF11A-206ENST00000617039 PMS2P5A8MQ11 134 aa11.99□□□□□ -0.49
TNFRSF11A-206ENST00000617039 TPPP2P59282 170 aa11.99□□□□□ -0.49
TNFRSF11A-206ENST00000617039 IQCJQ1A5X6 159 aa11.99□□□□□ -0.49
TNFRSF11A-206ENST00000617039 CRYBG3Q68DQ2 2970 aa11.98□□□□□ -0.49
TNFRSF11A-206ENST00000617039 PSG1P11464 419 aa11.98□□□□□ -0.49
TNFRSF11A-206ENST00000617039 CA7P43166 264 aa11.98□□□□□ -0.49
TNFRSF11A-206ENST00000617039 TCTEX1D1Q8N7M0 179 aa11.98□□□□□ -0.49
TNFRSF11A-206ENST00000617039 SHISA9B4DS77 424 aa11.98□□□□□ -0.49
TNFRSF11A-206ENST00000617039 GGCTO75223 188 aaKnown RBP11.98□□□□□ -0.49
TNFRSF11A-206ENST00000617039 Q6ZSR3 168 aa11.98□□□□□ -0.49
TNFRSF11A-206ENST00000617039 C7orf69Q9H7B7 122 aa11.98□□□□□ -0.49
TNFRSF11A-206ENST00000617039 A0A087X0M5 115 aa11.98□□□□□ -0.49
TNFRSF11A-206ENST00000617039 A0A1B0GX30 115 aa11.98□□□□□ -0.49
TNFRSF11A-206ENST00000617039 FRMD6-AS1P0C7T7 363 aa11.98□□□□□ -0.49
TNFRSF11A-206ENST00000617039 BRS3P32247 399 aa11.98□□□□□ -0.49
TNFRSF11A-206ENST00000617039 SSX8Q7RTT4 187 aa11.98□□□□□ -0.49
TNFRSF11A-206ENST00000617039 NOL4LQ96MY1 436 aaPredicted RBP11.98□□□□□ -0.49
TNFRSF11A-206ENST00000617039 TBX15Q96SF7 602 aa11.98□□□□□ -0.49
TNFRSF11A-206ENST00000617039 SCGB2A1O75556 95 aa11.97□□□□□ -0.49
TNFRSF11A-206ENST00000617039 FNDC4Q9H6D8 234 aaPredicted RBP11.97□□□□□ -0.49
TNFRSF11A-206ENST00000617039 G3V318 75 aa11.97□□□□□ -0.49
TNFRSF11A-206ENST00000617039 ISLRO14498 428 aa11.97□□□□□ -0.49
TNFRSF11A-206ENST00000617039 CLEC2AQ6UVW9 174 aa11.97□□□□□ -0.49
TNFRSF11A-206ENST00000617039 LINC01551Q86U37 167 aa11.97□□□□□ -0.49
TNFRSF11A-206ENST00000617039 MBD3L1Q8WWY6 194 aa11.97□□□□□ -0.49
TNFRSF11A-206ENST00000617039 IFT22Q9H7X7 185 aa11.97□□□□□ -0.49
TNFRSF11A-206ENST00000617039 B4DEV8 164 aa11.97□□□□□ -0.49
TNFRSF11A-206ENST00000617039 NDUFA2O43678 99 aa11.97□□□□□ -0.49
TNFRSF11A-206ENST00000617039 S100A4P26447 101 aaKnown RBP11.97□□□□□ -0.49
TNFRSF11A-206ENST00000617039 FBXL7Q9UJT9 491 aa11.97□□□□□ -0.49
TNFRSF11A-206ENST00000617039 TMEM250H0YL14 139 aa11.96□□□□□ -0.49
TNFRSF11A-206ENST00000617039 SNAI2O43623 268 aa11.96□□□□□ -0.49
TNFRSF11A-206ENST00000617039 TGFAP01135 160 aa11.96□□□□□ -0.49
TNFRSF11A-206ENST00000617039 RNASE2P10153 161 aaKnown RBP11.96□□□□□ -0.49
TNFRSF11A-206ENST00000617039 VMO1Q7Z5L0 202 aa11.96□□□□□ -0.49
TNFRSF11A-206ENST00000617039 ANAPC16Q96DE5 110 aa11.96□□□□□ -0.49
TNFRSF11A-206ENST00000617039 THYN1Q9P016 225 aa11.96□□□□□ -0.49
TNFRSF11A-206ENST00000617039 MRPL36Q9P0J6 103 aaKnown RBP11.96□□□□□ -0.49
TNFRSF11A-206ENST00000617039 PCSK5Q92824 1860 aa11.96□□□□□ -0.49
TNFRSF11A-206ENST00000617039 HAX1O00165 279 aa11.96□□□□□ -0.49
TNFRSF11A-206ENST00000617039 MEF2CQ06413 473 aaPredicted RBP11.96□□□□□ -0.49
TNFRSF11A-206ENST00000617039 CIARTQ8N365 385 aaPredicted RBP11.96□□□□□ -0.49
TNFRSF11A-206ENST00000617039 OR1P1Q8NH06 330 aa11.96□□□□□ -0.49
TNFRSF11A-206ENST00000617039 Q8TAT8 98 aa11.96□□□□□ -0.49
TNFRSF11A-206ENST00000617039 ST6GALNAC6Q969X2 333 aa11.96□□□□□ -0.49
TNFRSF11A-206ENST00000617039 ZNF138P52744 262 aa11.96□□□□□ -0.5
TNFRSF11A-206ENST00000617039 HIST2H2BDQ6DRA6 164 aa11.96□□□□□ -0.5
TNFRSF11A-206ENST00000617039 SRSF7Q16629 238 aaKnown RBP eCLIP11.95□□□□□ -0.5
TNFRSF11A-206ENST00000617039 ERASQ7Z444 233 aa11.95□□□□□ -0.5
TNFRSF11A-206ENST00000617039 CCL19Q99731 98 aa11.95□□□□□ -0.5
TNFRSF11A-206ENST00000617039 CBLN4Q9NTU7 201 aa11.95□□□□□ -0.5
TNFRSF11A-206ENST00000617039 ZNF586Q9NXT0 402 aa11.95□□□□□ -0.5
TNFRSF11A-206ENST00000617039 USP24Q9UPU5 2620 aa11.95□□□□□ -0.5
TNFRSF11A-206ENST00000617039 PITPNC1Q9UKF7 332 aa11.95□□□□□ -0.5
TNFRSF11A-206ENST00000617039 SVEP1Q4LDE5 3571 aa11.95□□□□□ -0.5
TNFRSF11A-206ENST00000617039 BUB1B-PAK6H3BSN5 160 aa11.95□□□□□ -0.5
TNFRSF11A-206ENST00000617039 STAG3L2P0CL84 134 aa11.95□□□□□ -0.5
TNFRSF11A-206ENST00000617039 STAG3L3P0CL85 134 aa11.95□□□□□ -0.5
TNFRSF11A-206ENST00000617039 VDAC2P45880 294 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF11A-206ENST00000617039 CX3CL1P78423 397 aa11.95□□□□□ -0.5
TNFRSF11A-206ENST00000617039 CEACAM4O75871 244 aa11.94□□□□□ -0.5
TNFRSF11A-206ENST00000617039 CDX1P47902 265 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF11A-206ENST00000617039 C5orf17Q8NAS9 161 aa11.94□□□□□ -0.5
TNFRSF11A-206ENST00000617039 PRSS3P2Q8NHM4 247 aa11.94□□□□□ -0.5
TNFRSF11A-206ENST00000617039 IGKV1OR2-108A0A075B7D4 117 aa11.94□□□□□ -0.5
TNFRSF11A-206ENST00000617039 NPIPB11E5RHQ5 1161 aa11.94□□□□□ -0.5
TNFRSF11A-206ENST00000617039 M0R2Z0 102 aa11.94□□□□□ -0.5
TNFRSF11A-206ENST00000617039 FAM106CPP0CH98 169 aa11.94□□□□□ -0.5
TNFRSF11A-206ENST00000617039 NPPCP23582 126 aa11.94□□□□□ -0.5
TNFRSF11A-206ENST00000617039 SIGLEC9Q9Y336 463 aa11.94□□□□□ -0.5
TNFRSF11A-206ENST00000617039 CORTO00230 105 aa11.94□□□□□ -0.5
TNFRSF11A-206ENST00000617039 SPRY2O43597 315 aa11.94□□□□□ -0.5
TNFRSF11A-206ENST00000617039 ADMP35318 185 aa11.94□□□□□ -0.5
TNFRSF11A-206ENST00000617039 NBR2O15453 112 aa11.93□□□□□ -0.5
TNFRSF11A-206ENST00000617039 APCSP02743 223 aa11.93□□□□□ -0.5
TNFRSF11A-206ENST00000617039 PYY3Q5JQD4 70 aa11.93□□□□□ -0.5
TNFRSF11A-206ENST00000617039 C17orf77Q96MU5 243 aa11.93□□□□□ -0.5
TNFRSF11A-206ENST00000617039 ATG101Q9BSB4 218 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms