RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 TRBV9A0A0B4J1U6 114 aa9.1□□□□□ -0.95
SHANK2-219ENST00000606715 A0A1B0GW15 77 aa9.1□□□□□ -0.95
SHANK2-219ENST00000606715 ETV2O00321 342 aaPredicted RBP9.1□□□□□ -0.95
SHANK2-219ENST00000606715 TNFSF13O75888 250 aa9.1□□□□□ -0.95
SHANK2-219ENST00000606715 LHBP01229 141 aa9.1□□□□□ -0.95
SHANK2-219ENST00000606715 FOXA3P55318 350 aaPredicted RBP9.1□□□□□ -0.95
SHANK2-219ENST00000606715 IFITM3Q01628 133 aa9.1□□□□□ -0.95
SHANK2-219ENST00000606715 SPSB3Q6PJ21 355 aa9.1□□□□□ -0.95
SHANK2-219ENST00000606715 VENTXO95231 258 aa9.1□□□□□ -0.95
SHANK2-219ENST00000606715 DDTP30046 118 aa9.1□□□□□ -0.95
SHANK2-219ENST00000606715 PCP4P48539 62 aa9.1□□□□□ -0.95
SHANK2-219ENST00000606715 TMEM200BQ69YZ2 307 aa9.1□□□□□ -0.95
SHANK2-219ENST00000606715 FOXL2NBQ6ZUU3 175 aa9.1□□□□□ -0.95
SHANK2-219ENST00000606715 TMEM190Q8WZ59 177 aa9.1□□□□□ -0.95
SHANK2-219ENST00000606715 IGHV3-73A0A0B4J1V6 119 aa9.1□□□□□ -0.95
SHANK2-219ENST00000606715 IGKV1-9A0A0C4DH69 117 aa9.1□□□□□ -0.95
SHANK2-219ENST00000606715 TFF3Q07654 80 aa9.1□□□□□ -0.95
SHANK2-219ENST00000606715 F5H768 121 aa9.09□□□□□ -0.95
SHANK2-219ENST00000606715 APOHP02749 345 aaPredicted RBP9.09□□□□□ -0.95
SHANK2-219ENST00000606715 DAD1P61803 113 aa9.09□□□□□ -0.95
SHANK2-219ENST00000606715 ARTNQ5T4W7 220 aa9.09□□□□□ -0.95
SHANK2-219ENST00000606715 ZNF660Q6AZW8 331 aaPredicted RBP9.09□□□□□ -0.95
SHANK2-219ENST00000606715 MIR17HGQ75NE6 70 aa9.09□□□□□ -0.95
SHANK2-219ENST00000606715 A0A1B0GWB2 263 aa9.09□□□□□ -0.95
SHANK2-219ENST00000606715 MLNRO43193 412 aa9.09□□□□□ -0.95
SHANK2-219ENST00000606715 PRR30Q53SZ7 412 aaPredicted RBP9.09□□□□□ -0.95
SHANK2-219ENST00000606715 PMCHL2Q9BQD1 86 aa9.09□□□□□ -0.95
SHANK2-219ENST00000606715 SDK2Q58EX2 2172 aa9.09□□□□□ -0.95
SHANK2-219ENST00000606715 INTS1Q8N201 2190 aaKnown RBP9.09□□□□□ -0.95
SHANK2-219ENST00000606715 TRBV7-1A0A0A6YYK4 115 aa9.09□□□□□ -0.95
SHANK2-219ENST00000606715 NDUFA3O95167 84 aa9.09□□□□□ -0.95
SHANK2-219ENST00000606715 IGHV1-3A0A0C4DH29 117 aa9.09□□□□□ -0.95
SHANK2-219ENST00000606715 A0A1B0GV72 72 aa9.09□□□□□ -0.95
SHANK2-219ENST00000606715 PLA2G5P39877 138 aa9.09□□□□□ -0.95
SHANK2-219ENST00000606715 RPUSD1Q9UJJ7 312 aaKnown RBP9.09□□□□□ -0.95
SHANK2-219ENST00000606715 CXCL2P19875 107 aa9.08□□□□□ -0.96
SHANK2-219ENST00000606715 GFI1BQ5VTD9 330 aa9.08□□□□□ -0.96
SHANK2-219ENST00000606715 HEPN1Q6WQI6 88 aa9.08□□□□□ -0.96
SHANK2-219ENST00000606715 LY6HO94772 140 aa9.08□□□□□ -0.96
SHANK2-219ENST00000606715 APOC4P55056 127 aa9.08□□□□□ -0.96
SHANK2-219ENST00000606715 TMEM155Q4W5P6 130 aa9.08□□□□□ -0.96
SHANK2-219ENST00000606715 TMEM144Q7Z5S9 345 aa9.08□□□□□ -0.96
SHANK2-219ENST00000606715 ORMDL3Q8N138 153 aa9.08□□□□□ -0.96
SHANK2-219ENST00000606715 RNF182Q8N6D2 247 aa9.08□□□□□ -0.96
SHANK2-219ENST00000606715 FGFBP3Q8TAT2 258 aa9.08□□□□□ -0.96
SHANK2-219ENST00000606715 SHISA3A0PJX4 238 aa9.08□□□□□ -0.96
SHANK2-219ENST00000606715 COL8A2P25067 703 aa9.08□□□□□ -0.96
SHANK2-219ENST00000606715 MPZP25189 248 aa9.08□□□□□ -0.96
SHANK2-219ENST00000606715 PEF1Q9UBV8 284 aaKnown RBP9.08□□□□□ -0.96
SHANK2-219ENST00000606715 TRAV9-2A0A087WT02 112 aa9.08□□□□□ -0.96
SHANK2-219ENST00000606715 MBNL3Q9NUK0 354 aaKnown RBP9.08□□□□□ -0.96
SHANK2-219ENST00000606715 PUSL1Q8N0Z8 303 aaKnown RBP9.07□□□□□ -0.96
SHANK2-219ENST00000606715 TTC9CQ8N5M4 171 aa9.07□□□□□ -0.96
SHANK2-219ENST00000606715 FAM223BA6NKX1 122 aa9.07□□□□□ -0.96
SHANK2-219ENST00000606715 SNAI2O43623 268 aa9.07□□□□□ -0.96
SHANK2-219ENST00000606715 SYNJ2BPP57105 145 aa9.07□□□□□ -0.96
SHANK2-219ENST00000606715 FAM223AQ8IWN6 122 aa9.07□□□□□ -0.96
SHANK2-219ENST00000606715 CYSLTR1Q9Y271 337 aa9.07□□□□□ -0.96
SHANK2-219ENST00000606715 APOMO95445 188 aa9.07□□□□□ -0.96
SHANK2-219ENST00000606715 PI4KAP42356 2102 aa9.07□□□□□ -0.96
SHANK2-219ENST00000606715 A0A1B0GV90 55 aa9.07□□□□□ -0.96
SHANK2-219ENST00000606715 LINC01619G3V211 115 aa9.07□□□□□ -0.96
SHANK2-219ENST00000606715 FCN3O75636 299 aa9.07□□□□□ -0.96
SHANK2-219ENST00000606715 TYMSP04818 313 aa9.07□□□□□ -0.96
SHANK2-219ENST00000606715 PPIFP30405 207 aaKnown RBP9.07□□□□□ -0.96
SHANK2-219ENST00000606715 SAA4P35542 130 aa9.07□□□□□ -0.96
SHANK2-219ENST00000606715 OR5A1Q8NGJ0 315 aa9.07□□□□□ -0.96
SHANK2-219ENST00000606715 GPR179Q6PRD1 2367 aa9.07□□□□□ -0.96
SHANK2-219ENST00000606715 RUSC1-AS1Q66K80 236 aa9.06□□□□□ -0.96
SHANK2-219ENST00000606715 TCF20Q9UGU0 1960 aaKnown RBP9.06□□□□□ -0.96
SHANK2-219ENST00000606715 GNG5P63218 68 aa9.06□□□□□ -0.96
SHANK2-219ENST00000606715 ZNF319Q9P2F9 582 aa9.06□□□□□ -0.96
SHANK2-219ENST00000606715 TSC2P49815 1807 aa9.06□□□□□ -0.96
SHANK2-219ENST00000606715 TRAV12-3A0A0B4J271 114 aa9.06□□□□□ -0.96
SHANK2-219ENST00000606715 FOXG1P55316 489 aaPredicted RBP9.06□□□□□ -0.96
SHANK2-219ENST00000606715 ZNF474Q6S9Z5 364 aaPredicted RBP9.06□□□□□ -0.96
SHANK2-219ENST00000606715 RPL15P61313 204 aaKnown RBP9.06□□□□□ -0.96
SHANK2-219ENST00000606715 CTAG1AP78358 180 aa9.06□□□□□ -0.96
SHANK2-219ENST00000606715 NDPQ00604 133 aa9.06□□□□□ -0.96
SHANK2-219ENST00000606715 DLX4Q92988 240 aaPredicted RBP9.06□□□□□ -0.96
SHANK2-219ENST00000606715 A0A0U1RRA0 63 aa9.06□□□□□ -0.96
SHANK2-219ENST00000606715 DANCRP0C864 163 aa9.06□□□□□ -0.96
SHANK2-219ENST00000606715 SRSF1Q07955 248 aaKnown RBP eCLIP9.06□□□□□ -0.96
SHANK2-219ENST00000606715 NEUROG1Q92886 237 aa9.06□□□□□ -0.96
SHANK2-219ENST00000606715 PSG8Q9UQ74 426 aa9.05□□□□□ -0.96
SHANK2-219ENST00000606715 H2BFSP57053 126 aa9.05□□□□□ -0.96
SHANK2-219ENST00000606715 RTBDNQ9BSG5 229 aaPredicted RBP9.05□□□□□ -0.96
SHANK2-219ENST00000606715 SCO2A0A1W2PP80 73 aa9.05□□□□□ -0.96
SHANK2-219ENST00000606715 C5orf64Q2M2E5 130 aa9.05□□□□□ -0.96
SHANK2-219ENST00000606715 CACNA1BQ00975 2339 aa9.05□□□□□ -0.96
SHANK2-219ENST00000606715 SRRM4A7MD48 611 aaKnown RBP9.05□□□□□ -0.96
SHANK2-219ENST00000606715 RMI2Q96E14 147 aa9.05□□□□□ -0.96
SHANK2-219ENST00000606715 J3QLI3 93 aa9.04□□□□□ -0.96
SHANK2-219ENST00000606715 PRO3102Q9H379 93 aa9.04□□□□□ -0.96
SHANK2-219ENST00000606715 PRDM13Q9H4Q3 707 aa9.04□□□□□ -0.96
SHANK2-219ENST00000606715 DPRXA6NFQ7 191 aa9.04□□□□□ -0.96
SHANK2-219ENST00000606715 PSG1P11464 419 aa9.04□□□□□ -0.96
SHANK2-219ENST00000606715 MORN3Q6PF18 240 aaPredicted RBP9.04□□□□□ -0.96
SHANK2-219ENST00000606715 TRBV6-6A0A0A6YYG2 114 aa9.04□□□□□ -0.96
SHANK2-219ENST00000606715 INS-IGF2F8WCM5 200 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms